protein kinase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotrans_gag | PF03732 | 149 - 241 | 5.4e-20 | Retrotransposon gag protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 790 |
| AatII | GACGTC | 1 cut(s) | 1846 |
| Acc16I | TGCGCA | 1 cut(s) | 2006 |
| Acc36I | ACCTGC | 1 cut(s) | 790 |
| Acc65I | GGTACC | 1 cut(s) | 1950 |
| AccB1I | GGYRCC | 2 cut(s) | 1019, 1950 |
| AccI | GTMKAC | 1 cut(s) | 1881 |
| AciI | CCGC | 3 cut(s) | 281, 785, 1706 |
| AclI | AACGTT | 1 cut(s) | 175 |
| AclWI | GGATC | 4 cut(s) | 769, 949, 1513, 1897 |
| AcoI | YGGCCR | 1 cut(s) | 900 |
| AcsI | RAATTY | 6 cut(s) | 150, 429, 1031, 1276, 1904, 2011 |
| AcuI | CTGAAG | 1 cut(s) | 455 |
| AcyI | GRCGYC | 1 cut(s) | 1843 |
| AfaI | GTAC | 2 cut(s) | 1456, 1952 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 674, 1082 |
| AflII | CTTAAG | 1 cut(s) | 440 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1346, 1378 |
| Alw26I | GTCTC | 5 cut(s) | 350, 722, 873, 1361, 1513 |
| AlwI | GGATC | 4 cut(s) | 769, 949, 1513, 1897 |
| AoxI | GGCC | 2 cut(s) | 900, 1407 |
| ApeKI | GCWGC | 6 cut(s) | 275, 278, 493, 749, 788, 1471 |
| ApoI | RAATTY | 6 cut(s) | 150, 429, 1031, 1276, 1904, 2011 |
| AseI | ATTAAT | 1 cut(s) | 846 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1031 |
| Asp718I | GGTACC | 1 cut(s) | 1950 |
| AspLEI | GCGC | 1 cut(s) | 2007 |
| AspS9I | GGNCC | 3 cut(s) | 127, 1189, 1381 |
| AsuC2I | CCSGG | 1 cut(s) | 1554 |
| AsuHPI | GGTGA | 8 cut(s) | 112, 159, 253, 771, 1099, 1215, 1555, 1925 |
| AsuII | TTCGAA | 1 cut(s) | 1089 |
| AvaII | GGWCC | 3 cut(s) | 127, 1189, 1381 |
| AxyI | CCTNAGG | 1 cut(s) | 1130 |
| BaeGI | GKGCMC | 1 cut(s) | 410 |
| BalI | TGGCCA | 1 cut(s) | 902 |
| BanI | GGYRCC | 2 cut(s) | 1019, 1950 |
| BanII | GRGCYC | 1 cut(s) | 817 |
| BauI | CACGAG | 1 cut(s) | 564 |
| BbsI | GAAGAC | 2 cut(s) | 141, 308 |
| BbvI | GCAGC | 6 cut(s) | 262, 290, 480, 761, 775, 1458 |
| BccI | CCATC | 4 cut(s) | 254, 997, 1418, 1904 |
| BcnI | CCSGG | 1 cut(s) | 1554 |
| BcoDI | GTCTC | 5 cut(s) | 350, 722, 873, 1361, 1513 |
| BfaI | CTAG | 5 cut(s) | 53, 351, 531, 1667, 1863 |
| BfmI | CTRYAG | 2 cut(s) | 270, 276 |
| BfrI | CTTAAG | 1 cut(s) | 440 |
| BfuAI | ACCTGC | 1 cut(s) | 790 |
| BglII | AGATCT | 1 cut(s) | 1663 |
| BisI | GCNGC | 7 cut(s) | 276, 279, 494, 750, 786, 789, 1472 |
| BlsI | GCNGC | 7 cut(s) | 277, 280, 495, 751, 787, 790, 1473 |
| Bme1390I | CCNGG | 1 cut(s) | 1554 |
| Bme18I | GGWCC | 3 cut(s) | 127, 1189, 1381 |
| BmgT120I | GGNCC | 3 cut(s) | 127, 1189, 1381 |
| BmiI | GGNNCC | 4 cut(s) | 28, 1021, 1191, 1952 |
| BmrFI | CCNGG | 1 cut(s) | 1554 |
| BmsI | GCATC | 6 cut(s) | 267, 736, 1126, 1229, 1631, 1951 |
| BpiI | GAAGAC | 2 cut(s) | 141, 308 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1493, 1525 |
| Bpu10I | CCTNAGC | 2 cut(s) | 578, 792 |
| Bpu14I | TTCGAA | 1 cut(s) | 1089 |
| BpuEI | CTTGAG | 4 cut(s) | 6, 749, 824, 1424 |
| BpuMI | CCSGG | 1 cut(s) | 1554 |
| BsaHI | GRCGYC | 1 cut(s) | 1843 |
| BsaI | GGTCTC | 2 cut(s) | 350, 722 |
| BsaJI | CCNNGG | 5 cut(s) | 123, 340, 411, 903, 1552 |
| BsaWI | WCCGGW | 1 cut(s) | 1886 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 674, 1082 |
| Bse21I | CCTNAGG | 1 cut(s) | 1130 |
| Bse3DI | GCAATG | 1 cut(s) | 668 |
| BseDI | CCNNGG | 5 cut(s) | 123, 340, 411, 903, 1552 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 674, 1082 |
| BseMI | GCAATG | 1 cut(s) | 668 |
| BseMII | CTCAG | 4 cut(s) | 884, 1144, 1224, 1524 |
| BseRI | GAGGAG | 1 cut(s) | 1001 |
| BseSI | GKGCMC | 1 cut(s) | 410 |
| BseXI | GCAGC | 6 cut(s) | 262, 290, 480, 761, 775, 1458 |
| BshFI | GGCC | 2 cut(s) | 902, 1409 |
| BshNI | GGYRCC | 2 cut(s) | 1019, 1950 |
| BsiSI | CCGG | 2 cut(s) | 1554, 1887 |
| BslFI | GGGAC | 1 cut(s) | 903 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 674, 1082 |
| BsmAI | GTCTC | 5 cut(s) | 350, 722, 873, 1361, 1513 |
| BsmFI | GGGAC | 1 cut(s) | 903 |
| BsmI | GAATGC | 3 cut(s) | 446, 536, 1606 |
| BsnI | GGCC | 2 cut(s) | 902, 1409 |
| Bso31I | GGTCTC | 2 cut(s) | 350, 722 |
| Bsp119I | TTCGAA | 1 cut(s) | 1089 |
| Bsp1286I | GDGCHC | 2 cut(s) | 410, 817 |
| Bsp143I | GATC | 6 cut(s) | 588, 761, 954, 1518, 1663, 1889 |
| Bsp19I | CCATGG | 2 cut(s) | 340, 903 |
| BspACI | CCGC | 3 cut(s) | 281, 785, 1706 |
| BspANI | GGCC | 2 cut(s) | 902, 1409 |
| BspCNI | CTCAG | 4 cut(s) | 883, 1143, 1225, 1523 |
| BspLI | GGNNCC | 4 cut(s) | 28, 1021, 1191, 1952 |
| BspMAI | CTGCAG | 1 cut(s) | 280 |
| BspMI | ACCTGC | 1 cut(s) | 790 |
| BspPI | GGATC | 4 cut(s) | 769, 949, 1513, 1897 |
| BspQI | GCTCTTC | 2 cut(s) | 53, 183 |
| BspT104I | TTCGAA | 1 cut(s) | 1089 |
| BspT107I | GGYRCC | 2 cut(s) | 1019, 1950 |
| BspTI | CTTAAG | 1 cut(s) | 440 |
| BspTNI | GGTCTC | 2 cut(s) | 350, 722 |
| BsrDI | GCAATG | 1 cut(s) | 668 |
| BssECI | CCNNGG | 5 cut(s) | 123, 340, 411, 903, 1552 |
| BssMI | GATC | 6 cut(s) | 588, 761, 954, 1518, 1663, 1889 |
| BssNI | GRCGYC | 1 cut(s) | 1843 |
| BssSI | CACGAG | 1 cut(s) | 564 |
| BssT1I | CCWWGG | 4 cut(s) | 123, 340, 411, 903 |
| Bst2BI | CACGAG | 1 cut(s) | 564 |
| Bst4CI | ACNGT | 3 cut(s) | 515, 574, 1066 |
| Bst6I | CTCTTC | 3 cut(s) | 53, 183, 1404 |
| BstACI | GRCGYC | 1 cut(s) | 1843 |
| BstAFI | CTTAAG | 1 cut(s) | 440 |
| BstBI | TTCGAA | 1 cut(s) | 1089 |
| BstDEI | CTNAG | 7 cut(s) | 578, 792, 870, 1130, 1233, 1434, 1510 |
| BstDSI | CCRYGG | 2 cut(s) | 340, 903 |
| BstHHI | GCGC | 1 cut(s) | 2007 |
| BstKTI | GATC | 6 cut(s) | 591, 764, 957, 1521, 1666, 1892 |
| BstMAI | GTCTC | 5 cut(s) | 350, 722, 873, 1361, 1513 |
| BstMBI | GATC | 6 cut(s) | 588, 761, 954, 1518, 1663, 1889 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 821, 1048, 1145 |
| BstNSI | RCATGY | 3 cut(s) | 258, 406, 912 |
| BstSCI | CCNGG | 1 cut(s) | 1552 |
| BstSFI | CTRYAG | 2 cut(s) | 270, 276 |
| BstSLI | GKGCMC | 1 cut(s) | 410 |
| BstV1I | GCAGC | 6 cut(s) | 262, 290, 480, 761, 775, 1458 |
| BstV2I | GAAGAC | 2 cut(s) | 141, 308 |
| BstX2I | RGATCY | 1 cut(s) | 1663 |
| BstYI | RGATCY | 1 cut(s) | 1663 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1130 |
| BsuRI | GGCC | 2 cut(s) | 902, 1409 |
| BtgI | CCRYGG | 2 cut(s) | 340, 903 |
| BtsI | GCAGTG | 1 cut(s) | 2000 |
| BtsIMutI | CAGTG | 2 cut(s) | 579, 2000 |
| BveI | ACCTGC | 1 cut(s) | 790 |
| CfoI | GCGC | 1 cut(s) | 2007 |
| Cfr13I | GGNCC | 3 cut(s) | 127, 1189, 1381 |
| Csp6I | GTAC | 2 cut(s) | 1455, 1951 |
| CviQI | GTAC | 2 cut(s) | 1455, 1951 |
| DdeI | CTNAG | 7 cut(s) | 578, 792, 870, 1130, 1233, 1434, 1510 |
| DpnI | GATC | 6 cut(s) | 590, 763, 956, 1520, 1665, 1891 |
| DpnII | GATC | 6 cut(s) | 588, 761, 954, 1518, 1663, 1889 |
| DraI | TTTAAA | 1 cut(s) | 1818 |
| EaeI | YGGCCR | 1 cut(s) | 900 |
| Eam1104I | CTCTTC | 3 cut(s) | 53, 183, 1404 |
| EarI | CTCTTC | 3 cut(s) | 53, 183, 1404 |
| Eco130I | CCWWGG | 4 cut(s) | 123, 340, 411, 903 |
| Eco24I | GRGCYC | 1 cut(s) | 817 |
| Eco31I | GGTCTC | 2 cut(s) | 350, 722 |
| Eco47I | GGWCC | 3 cut(s) | 127, 1189, 1381 |
| Eco57I | CTGAAG | 1 cut(s) | 455 |
| Eco81I | CCTNAGG | 1 cut(s) | 1130 |
| EcoO109I | RGGNCCY | 2 cut(s) | 127, 1189 |
| EcoT14I | CCWWGG | 4 cut(s) | 123, 340, 411, 903 |
| EcoT22I | ATGCAT | 3 cut(s) | 6, 260, 631 |
| EcoT38I | GRGCYC | 1 cut(s) | 817 |
| ErhI | CCWWGG | 4 cut(s) | 123, 340, 411, 903 |
| FaqI | GGGAC | 1 cut(s) | 903 |
| FauI | CCCGC | 1 cut(s) | 274 |
| FauNDI | CATATG | 1 cut(s) | 1164 |
| FblI | GTMKAC | 1 cut(s) | 1881 |
| Fnu4HI | GCNGC | 7 cut(s) | 276, 279, 494, 750, 786, 789, 1472 |
| FriOI | GRGCYC | 1 cut(s) | 817 |
| Fsp4HI | GCNGC | 7 cut(s) | 276, 279, 494, 750, 786, 789, 1472 |
| FspBI | CTAG | 5 cut(s) | 53, 351, 531, 1667, 1863 |
| FspI | TGCGCA | 1 cut(s) | 2006 |
| GlaI | GCGC | 1 cut(s) | 2006 |
| GluI | GCNGC | 7 cut(s) | 276, 279, 494, 750, 786, 789, 1472 |
| HaeIII | GGCC | 2 cut(s) | 902, 1409 |
| HapII | CCGG | 2 cut(s) | 1554, 1887 |
| HhaI | GCGC | 1 cut(s) | 2007 |
| Hin1I | GRCGYC | 1 cut(s) | 1843 |
| Hin6I | GCGC | 1 cut(s) | 2005 |
| HinP1I | GCGC | 1 cut(s) | 2005 |
| HindIII | AAGCTT | 2 cut(s) | 437, 851 |
| HinfI | GANTC | 5 cut(s) | 617, 1086, 1229, 1262, 1997 |
| HpaII | CCGG | 2 cut(s) | 1554, 1887 |
| HphI | GGTGA | 8 cut(s) | 112, 159, 253, 771, 1099, 1215, 1555, 1925 |
| Hpy166II | GTNNAC | 1 cut(s) | 1882 |
| Hpy188I | TCNGA | 2 cut(s) | 435, 1234 |
| Hpy188III | TCNNGA | 9 cut(s) | 41, 501, 728, 833, 877, 958, 1375, 1403, 1441 |
| Hpy8I | GTNNAC | 1 cut(s) | 1882 |
| HpyAV | CCTTC | 8 cut(s) | 507, 676, 707, 1201, 1210, 1372, 1486, 1821 |
| HpyCH4III | ACNGT | 3 cut(s) | 515, 574, 1066 |
| HpyCH4IV | ACGT | 4 cut(s) | 95, 175, 1199, 1843 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 821, 1048, 1145 |
| HpyF3I | CTNAG | 7 cut(s) | 578, 792, 870, 1130, 1233, 1434, 1510 |
| HpySE526I | ACGT | 4 cut(s) | 95, 175, 1199, 1843 |
| Hsp92I | GRCGYC | 1 cut(s) | 1843 |
| HspAI | GCGC | 1 cut(s) | 2005 |
| KpnI | GGTACC | 1 cut(s) | 1954 |
| Kzo9I | GATC | 6 cut(s) | 588, 761, 954, 1518, 1663, 1889 |
| LguI | GCTCTTC | 2 cut(s) | 53, 183 |
| LmnI | GCTCC | 5 cut(s) | 26, 702, 926, 1056, 1536 |
| Lsp1109I | GCAGC | 6 cut(s) | 262, 290, 480, 761, 775, 1458 |
| LweI | GCATC | 6 cut(s) | 267, 736, 1126, 1229, 1631, 1951 |
| MaeI | CTAG | 5 cut(s) | 53, 351, 531, 1667, 1863 |
| MaeII | ACGT | 4 cut(s) | 95, 175, 1199, 1843 |
| MaeIII | GTNAC | 4 cut(s) | 96, 568, 777, 1583 |
| MalI | GATC | 6 cut(s) | 590, 763, 956, 1520, 1665, 1891 |
| MboI | GATC | 6 cut(s) | 588, 761, 954, 1518, 1663, 1889 |
| MflI | RGATCY | 1 cut(s) | 1663 |
| MhlI | GDGCHC | 2 cut(s) | 410, 817 |
| MlsI | TGGCCA | 1 cut(s) | 902 |
| MluNI | TGGCCA | 1 cut(s) | 902 |
| MlyI | GAGTC | 1 cut(s) | 1223 |
| Mox20I | TGGCCA | 1 cut(s) | 902 |
| Mph1103I | ATGCAT | 3 cut(s) | 6, 260, 631 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1031 |
| MscI | TGGCCA | 1 cut(s) | 902 |
| MseI | TTAA | 6 cut(s) | 71, 441, 846, 992, 1817, 1895 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1167, 1617 |
| Msp20I | TGGCCA | 1 cut(s) | 902 |
| MspA1I | CMGCKG | 3 cut(s) | 275, 281, 1514 |
| MspCI | CTTAAG | 1 cut(s) | 440 |
| MspI | CCGG | 2 cut(s) | 1554, 1887 |
| MspR9I | CCNGG | 1 cut(s) | 1554 |
| Mva1269I | GAATGC | 3 cut(s) | 446, 536, 1606 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 821, 1048, 1145 |
| NciI | CCSGG | 1 cut(s) | 1554 |
| NcoI | CCATGG | 2 cut(s) | 340, 903 |
| NdeI | CATATG | 1 cut(s) | 1164 |
| NdeII | GATC | 6 cut(s) | 588, 761, 954, 1518, 1663, 1889 |
| NlaIV | GGNNCC | 4 cut(s) | 28, 1021, 1191, 1952 |
| NmuCI | GTSAC | 3 cut(s) | 96, 568, 777 |
| NsbI | TGCGCA | 1 cut(s) | 2006 |
| NsiI | ATGCAT | 3 cut(s) | 6, 260, 631 |
| NspI | RCATGY | 3 cut(s) | 258, 406, 912 |
| NspV | TTCGAA | 1 cut(s) | 1089 |
| PaqCI | CACCTGC | 1 cut(s) | 790 |
| PciSI | GCTCTTC | 2 cut(s) | 53, 183 |
| PctI | GAATGC | 3 cut(s) | 446, 536, 1606 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1031 |
| PfeI | GAWTC | 4 cut(s) | 617, 1086, 1262, 1997 |
| PkrI | GCNGC | 7 cut(s) | 277, 280, 495, 751, 787, 790, 1473 |
| PleI | GAGTC | 1 cut(s) | 1223 |
| PpsI | GAGTC | 1 cut(s) | 1223 |
| PpuMI | RGGWCCY | 2 cut(s) | 127, 1189 |
| PshBI | ATTAAT | 1 cut(s) | 846 |
| Psp1406I | AACGTT | 1 cut(s) | 175 |
| Psp5II | RGGWCCY | 2 cut(s) | 127, 1189 |
| PspN4I | GGNNCC | 4 cut(s) | 28, 1021, 1191, 1952 |
| PspPI | GGNCC | 3 cut(s) | 127, 1189, 1381 |
| PspPPI | RGGWCCY | 2 cut(s) | 127, 1189 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1421, 1453, 1731, 1763 |
| PstI | CTGCAG | 1 cut(s) | 280 |
| PsuI | RGATCY | 1 cut(s) | 1663 |
| PvuII | CAGCTG | 2 cut(s) | 275, 1514 |
| RsaI | GTAC | 2 cut(s) | 1456, 1952 |
| RsaNI | GTAC | 2 cut(s) | 1455, 1951 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1167, 1617 |
| SapI | GCTCTTC | 2 cut(s) | 53, 183 |
| SaqAI | TTAA | 6 cut(s) | 71, 441, 846, 992, 1817, 1895 |
| SatI | GCNGC | 7 cut(s) | 276, 279, 494, 750, 786, 789, 1472 |
| Sau3AI | GATC | 6 cut(s) | 588, 761, 954, 1518, 1663, 1889 |
| Sau96I | GGNCC | 3 cut(s) | 127, 1189, 1381 |
| SchI | GAGTC | 1 cut(s) | 1223 |
| ScrFI | CCNGG | 1 cut(s) | 1554 |
| SduI | GDGCHC | 2 cut(s) | 410, 817 |
| SfaNI | GCATC | 6 cut(s) | 267, 736, 1126, 1229, 1631, 1951 |
| SfcI | CTRYAG | 2 cut(s) | 270, 276 |
| SfuI | TTCGAA | 1 cut(s) | 1089 |
| SinI | GGWCC | 3 cut(s) | 127, 1189, 1381 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1167, 1617 |
| SmlI | CTYRAG | 5 cut(s) | 21, 440, 728, 803, 1403 |
| SmoI | CTYRAG | 5 cut(s) | 21, 440, 728, 803, 1403 |
| SsiI | CCGC | 3 cut(s) | 281, 785, 1706 |
| SspMI | CTAG | 5 cut(s) | 53, 351, 531, 1667, 1863 |
| StyD4I | CCNGG | 1 cut(s) | 1552 |
| StyI | CCWWGG | 4 cut(s) | 123, 340, 411, 903 |
| TaaI | ACNGT | 3 cut(s) | 515, 574, 1066 |
| TaiI | ACGT | 4 cut(s) | 98, 178, 1202, 1846 |
| TaqI | TCGA | 3 cut(s) | 771, 953, 1089 |
| TatI | WGTACW | 1 cut(s) | 1454 |
| TauI | GCSGC | 1 cut(s) | 788 |
| TfiI | GAWTC | 4 cut(s) | 617, 1086, 1262, 1997 |
| Tru1I | TTAA | 6 cut(s) | 71, 441, 846, 992, 1817, 1895 |
| Tru9I | TTAA | 6 cut(s) | 71, 441, 846, 992, 1817, 1895 |
| TscAI | CASTG | 2 cut(s) | 579, 2007 |
| TseFI | GTSAC | 3 cut(s) | 96, 568, 777 |
| TseI | GCWGC | 6 cut(s) | 275, 278, 493, 749, 788, 1471 |
| Tsp45I | GTSAC | 3 cut(s) | 96, 568, 777 |
| TspRI | CASTG | 2 cut(s) | 579, 2007 |
| Vha464I | CTTAAG | 1 cut(s) | 440 |
| VpaK11BI | GGWCC | 3 cut(s) | 127, 1189, 1381 |
| VspI | ATTAAT | 1 cut(s) | 846 |
| XapI | RAATTY | 6 cut(s) | 150, 429, 1031, 1276, 1904, 2011 |
| XceI | RCATGY | 3 cut(s) | 258, 406, 912 |
| XmiI | GTMKAC | 1 cut(s) | 1881 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1031 |
| XspI | CTAG | 5 cut(s) | 53, 351, 531, 1667, 1863 |
| ZraI | GACGTC | 1 cut(s) | 1844 |
| Zsp2I | ATGCAT | 3 cut(s) | 6, 260, 631 |