protein kinase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 162 - 257 | 9.4e-17 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 295 - 392 | 1.2e-34 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 319 - 422 | 7.9e-39 | RNase H-like domain found in reverse transcriptase |
| rve | PF00665 | 507 - 594 | 2.9e-15 | Integrase core domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 360, 932 |
| Acc36I | ACCTGC | 1 cut(s) | 1653 |
| Acc65I | GGTACC | 3 cut(s) | 457, 557, 1160 |
| AccB1I | GGYRCC | 4 cut(s) | 136, 457, 557, 1160 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 291 |
| AccI | GTMKAC | 1 cut(s) | 183 |
| AccIII | TCCGGA | 1 cut(s) | 419 |
| AciI | CCGC | 3 cut(s) | 282, 302, 1346 |
| AclWI | GGATC | 3 cut(s) | 1240, 1253, 2028 |
| AcoI | YGGCCR | 2 cut(s) | 478, 787 |
| AcsI | RAATTY | 1 cut(s) | 1262 |
| AcuI | CTGAAG | 2 cut(s) | 108, 1757 |
| AcvI | CACGTG | 1 cut(s) | 1397 |
| AcyI | GRCGYC | 2 cut(s) | 357, 929 |
| AfaI | GTAC | 5 cut(s) | 408, 459, 559, 1162, 1202 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 291, 567 |
| AflII | CTTAAG | 2 cut(s) | 1318, 1415 |
| AflIII | ACRYGT | 1 cut(s) | 14 |
| AgsI | TTSAA | 7 cut(s) | 53, 149, 175, 401, 1198, 1274, 1334 |
| AjnI | CCWGG | 1 cut(s) | 553 |
| AluBI | AGCT | 9 cut(s) | 651, 913, 1010, 1111, 1193, 1310, 1414, 1799, 1991 |
| AluI | AGCT | 9 cut(s) | 651, 913, 1010, 1111, 1193, 1310, 1414, 1799, 1991 |
| Alw21I | GWGCWC | 3 cut(s) | 1113, 1402, 1986 |
| Alw26I | GTCTC | 5 cut(s) | 81, 186, 194, 832, 1810 |
| AlwI | GGATC | 3 cut(s) | 1240, 1253, 2028 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 476 |
| Aor13HI | TCCGGA | 1 cut(s) | 419 |
| AoxI | GGCC | 4 cut(s) | 478, 787, 1728, 1893 |
| ApeKI | GCWGC | 1 cut(s) | 1190 |
| ApoI | RAATTY | 1 cut(s) | 1262 |
| Asp718I | GGTACC | 3 cut(s) | 457, 557, 1160 |
| AspS9I | GGNCC | 5 cut(s) | 960, 1526, 1729, 1866, 1893 |
| AsuHPI | GGTGA | 2 cut(s) | 1180, 1769 |
| AvaII | GGWCC | 3 cut(s) | 960, 1526, 1866 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1152, 1185 |
| BalI | TGGCCA | 2 cut(s) | 480, 789 |
| BamHI | GGATCC | 1 cut(s) | 1245 |
| BanI | GGYRCC | 4 cut(s) | 136, 457, 557, 1160 |
| BanII | GRGCYC | 1 cut(s) | 1113 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 167, 199 |
| BbrPI | CACGTG | 1 cut(s) | 1397 |
| BbsI | GAAGAC | 1 cut(s) | 1844 |
| Bbv12I | GWGCWC | 3 cut(s) | 1113, 1402, 1986 |
| BbvCI | CCTCAGC | 1 cut(s) | 1800 |
| BbvI | GCAGC | 1 cut(s) | 1202 |
| BccI | CCATC | 4 cut(s) | 285, 1055, 1236, 1688 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 14, 48, 755, 789 |
| BciT130I | CCWGG | 1 cut(s) | 555 |
| BcoDI | GTCTC | 5 cut(s) | 81, 186, 194, 832, 1810 |
| BfaI | CTAG | 4 cut(s) | 347, 761, 1677, 2024 |
| BfmI | CTRYAG | 2 cut(s) | 1098, 1897 |
| BfrI | CTTAAG | 2 cut(s) | 1318, 1415 |
| BfuAI | ACCTGC | 1 cut(s) | 1653 |
| BisI | GCNGC | 1 cut(s) | 1191 |
| BlsI | GCNGC | 1 cut(s) | 1192 |
| BmcAI | AGTACT | 1 cut(s) | 1202 |
| Bme1390I | CCNGG | 1 cut(s) | 555 |
| Bme18I | GGWCC | 3 cut(s) | 960, 1526, 1866 |
| BmgT120I | GGNCC | 5 cut(s) | 960, 1526, 1729, 1866, 1893 |
| BmiI | GGNNCC | 7 cut(s) | 138, 459, 559, 1162, 1247, 1527, 1702 |
| BmrFI | CCNGG | 1 cut(s) | 555 |
| BmrI | ACTGGG | 1 cut(s) | 389 |
| BmsI | GCATC | 5 cut(s) | 65, 252, 976, 1066, 1873 |
| BmuI | ACTGGG | 1 cut(s) | 389 |
| BpiI | GAAGAC | 1 cut(s) | 1844 |
| BpmI | CTGGAG | 1 cut(s) | 936 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1800 |
| BpuEI | CTTGAG | 4 cut(s) | 225, 899, 1045, 1154 |
| BsaAI | YACGTR | 1 cut(s) | 1397 |
| BsaHI | GRCGYC | 2 cut(s) | 357, 929 |
| BsaI | GGTCTC | 2 cut(s) | 832, 1810 |
| BsaJI | CCNNGG | 4 cut(s) | 553, 1164, 1229, 1337 |
| BsaWI | WCCGGW | 1 cut(s) | 419 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 414, 444 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 291, 567 |
| Bse1I | ACTGG | 3 cut(s) | 209, 395, 481 |
| Bse3DI | GCAATG | 1 cut(s) | 30 |
| BseAI | TCCGGA | 1 cut(s) | 419 |
| BseBI | CCWGG | 1 cut(s) | 555 |
| BseDI | CCNNGG | 4 cut(s) | 553, 1164, 1229, 1337 |
| BseGI | GGATG | 6 cut(s) | 59, 296, 631, 871, 1450, 1888 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 291, 567 |
| BseMI | GCAATG | 1 cut(s) | 30 |
| BseMII | CTCAG | 1 cut(s) | 1791 |
| BseNI | ACTGG | 3 cut(s) | 209, 395, 481 |
| BseRI | GAGGAG | 4 cut(s) | 69, 214, 260, 2084 |
| BseXI | GCAGC | 1 cut(s) | 1202 |
| BshFI | GGCC | 4 cut(s) | 480, 789, 1730, 1895 |
| BshNI | GGYRCC | 4 cut(s) | 136, 457, 557, 1160 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1113, 1402, 1986 |
| BsiSI | CCGG | 1 cut(s) | 420 |
| BslFI | GGGAC | 4 cut(s) | 376, 486, 1539, 1915 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 291, 567 |
| BsmAI | GTCTC | 5 cut(s) | 81, 186, 194, 832, 1810 |
| BsmFI | GGGAC | 4 cut(s) | 376, 486, 1539, 1915 |
| BsmI | GAATGC | 1 cut(s) | 445 |
| BsnI | GGCC | 4 cut(s) | 480, 789, 1730, 1895 |
| Bso31I | GGTCTC | 2 cut(s) | 832, 1810 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1113, 1402, 1986 |
| Bsp13I | TCCGGA | 1 cut(s) | 419 |
| Bsp143I | GATC | 5 cut(s) | 776, 1245, 1459, 2020, 2122 |
| Bsp19I | CCATGG | 1 cut(s) | 1337 |
| BspACI | CCGC | 3 cut(s) | 282, 302, 1346 |
| BspANI | GGCC | 4 cut(s) | 480, 789, 1730, 1895 |
| BspCNI | CTCAG | 1 cut(s) | 1792 |
| BspEI | TCCGGA | 1 cut(s) | 419 |
| BspLI | GGNNCC | 7 cut(s) | 138, 459, 559, 1162, 1247, 1527, 1702 |
| BspMI | ACCTGC | 1 cut(s) | 1653 |
| BspPI | GGATC | 3 cut(s) | 1240, 1253, 2028 |
| BspT107I | GGYRCC | 4 cut(s) | 136, 457, 557, 1160 |
| BspTI | CTTAAG | 2 cut(s) | 1318, 1415 |
| BspTNI | GGTCTC | 2 cut(s) | 832, 1810 |
| BsrDI | GCAATG | 1 cut(s) | 30 |
| BsrI | ACTGG | 3 cut(s) | 209, 395, 481 |
| BssECI | CCNNGG | 4 cut(s) | 553, 1164, 1229, 1337 |
| BssMI | GATC | 5 cut(s) | 776, 1245, 1459, 2020, 2122 |
| BssNI | GRCGYC | 2 cut(s) | 357, 929 |
| BssT1I | CCWWGG | 3 cut(s) | 1164, 1229, 1337 |
| Bst2UI | CCWGG | 1 cut(s) | 555 |
| Bst4CI | ACNGT | 5 cut(s) | 430, 472, 1426, 1489, 1843 |
| BstACI | GRCGYC | 2 cut(s) | 357, 929 |
| BstAFI | CTTAAG | 2 cut(s) | 1318, 1415 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1959 |
| BstBAI | YACGTR | 1 cut(s) | 1397 |
| BstC8I | GCNNGC | 3 cut(s) | 1566, 1673, 1797 |
| BstDEI | CTNAG | 4 cut(s) | 187, 411, 1623, 1800 |
| BstDSI | CCRYGG | 1 cut(s) | 1337 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 565 |
| BstF5I | GGATG | 6 cut(s) | 59, 296, 631, 871, 1450, 1888 |
| BstKTI | GATC | 5 cut(s) | 779, 1248, 1462, 2023, 2125 |
| BstMAI | GTCTC | 5 cut(s) | 81, 186, 194, 832, 1810 |
| BstMBI | GATC | 5 cut(s) | 776, 1245, 1459, 2020, 2122 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1007, 1668, 1892, 1959, 1997 |
| BstNI | CCWGG | 1 cut(s) | 555 |
| BstNSI | RCATGY | 2 cut(s) | 18, 1675 |
| BstSCI | CCNGG | 1 cut(s) | 553 |
| BstSFI | CTRYAG | 2 cut(s) | 1098, 1897 |
| BstV1I | GCAGC | 1 cut(s) | 1202 |
| BstV2I | GAAGAC | 1 cut(s) | 1844 |
| BstX2I | RGATCY | 2 cut(s) | 1245, 2020 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1790 |
| BstYI | RGATCY | 2 cut(s) | 1245, 2020 |
| BsuRI | GGCC | 4 cut(s) | 480, 789, 1730, 1895 |
| BtgI | CCRYGG | 1 cut(s) | 1337 |
| BtsCI | GGATG | 6 cut(s) | 59, 296, 631, 871, 1450, 1888 |
| BtsIMutI | CAGTG | 2 cut(s) | 132, 216 |
| BveI | ACCTGC | 1 cut(s) | 1653 |
| Cac8I | GCNNGC | 3 cut(s) | 1566, 1673, 1797 |
| CaiI | CAGNNNCTG | 1 cut(s) | 476 |
| Cfr13I | GGNCC | 5 cut(s) | 960, 1526, 1729, 1866, 1893 |
| CseI | GACGC | 1 cut(s) | 322 |
| Csp6I | GTAC | 5 cut(s) | 407, 458, 558, 1161, 1201 |
| CviQI | GTAC | 5 cut(s) | 407, 458, 558, 1161, 1201 |
| DdeI | CTNAG | 4 cut(s) | 187, 411, 1623, 1800 |
| DpnI | GATC | 5 cut(s) | 778, 1247, 1461, 2022, 2124 |
| DpnII | GATC | 5 cut(s) | 776, 1245, 1459, 2020, 2122 |
| DraI | TTTAAA | 1 cut(s) | 2145 |
| EaeI | YGGCCR | 2 cut(s) | 478, 787 |
| EciI | GGCGGA | 1 cut(s) | 317 |
| Ecl136II | GAGCTC | 1 cut(s) | 1111 |
| Eco130I | CCWWGG | 3 cut(s) | 1164, 1229, 1337 |
| Eco24I | GRGCYC | 1 cut(s) | 1113 |
| Eco31I | GGTCTC | 2 cut(s) | 832, 1810 |
| Eco32I | GATATC | 1 cut(s) | 307 |
| Eco47I | GGWCC | 3 cut(s) | 960, 1526, 1866 |
| Eco53kI | GAGCTC | 1 cut(s) | 1111 |
| Eco57I | CTGAAG | 2 cut(s) | 108, 1757 |
| Eco72I | CACGTG | 1 cut(s) | 1397 |
| EcoICRI | GAGCTC | 1 cut(s) | 1111 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 565 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1526, 1729 |
| EcoRII | CCWGG | 1 cut(s) | 553 |
| EcoRV | GATATC | 1 cut(s) | 307 |
| EcoT14I | CCWWGG | 3 cut(s) | 1164, 1229, 1337 |
| EcoT38I | GRGCYC | 1 cut(s) | 1113 |
| ErhI | CCWWGG | 3 cut(s) | 1164, 1229, 1337 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1098, 1130 |
| FaqI | GGGAC | 4 cut(s) | 376, 486, 1539, 1915 |
| FblI | GTMKAC | 1 cut(s) | 183 |
| Fnu4HI | GCNGC | 1 cut(s) | 1191 |
| FokI | GGATG | 6 cut(s) | 46, 303, 638, 878, 1457, 1895 |
| FriOI | GRGCYC | 1 cut(s) | 1113 |
| Fsp4HI | GCNGC | 1 cut(s) | 1191 |
| FspBI | CTAG | 4 cut(s) | 347, 761, 1677, 2024 |
| GluI | GCNGC | 1 cut(s) | 1191 |
| GsuI | CTGGAG | 1 cut(s) | 936 |
| HaeIII | GGCC | 4 cut(s) | 480, 789, 1730, 1895 |
| HapII | CCGG | 1 cut(s) | 420 |
| HgaI | GACGC | 1 cut(s) | 322 |
| Hin1I | GRCGYC | 2 cut(s) | 357, 929 |
| HindIII | AAGCTT | 3 cut(s) | 649, 1412, 1989 |
| HinfI | GANTC | 6 cut(s) | 377, 1066, 1378, 1619, 1915, 2090 |
| HpaII | CCGG | 1 cut(s) | 420 |
| HphI | GGTGA | 2 cut(s) | 1180, 1769 |
| Hpy166II | GTNNAC | 1 cut(s) | 184 |
| Hpy188I | TCNGA | 7 cut(s) | 376, 567, 592, 994, 1071, 1547, 2103 |
| Hpy8I | GTNNAC | 1 cut(s) | 184 |
| Hpy99I | CGWCG | 1 cut(s) | 528 |
| HpyAV | CCTTC | 6 cut(s) | 55, 132, 1021, 1210, 1282, 1545 |
| HpyCH4III | ACNGT | 5 cut(s) | 430, 472, 1426, 1489, 1843 |
| HpyCH4IV | ACGT | 5 cut(s) | 357, 929, 1269, 1302, 1396 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1007, 1668, 1892, 1959, 1997 |
| HpyF3I | CTNAG | 4 cut(s) | 187, 411, 1623, 1800 |
| HpySE526I | ACGT | 5 cut(s) | 357, 929, 1269, 1302, 1396 |
| Hsp92I | GRCGYC | 2 cut(s) | 357, 929 |
| Kpn2I | TCCGGA | 1 cut(s) | 419 |
| KpnI | GGTACC | 3 cut(s) | 461, 561, 1164 |
| Kzo9I | GATC | 5 cut(s) | 776, 1245, 1459, 2020, 2122 |
| LmnI | GCTCC | 3 cut(s) | 1007, 1116, 1981 |
| Lsp1109I | GCAGC | 1 cut(s) | 1202 |
| LweI | GCATC | 5 cut(s) | 65, 252, 976, 1066, 1873 |
| MaeI | CTAG | 4 cut(s) | 347, 761, 1677, 2024 |
| MaeII | ACGT | 5 cut(s) | 357, 929, 1269, 1302, 1396 |
| MaeIII | GTNAC | 5 cut(s) | 353, 424, 472, 1392, 1750 |
| MalI | GATC | 5 cut(s) | 778, 1247, 1461, 2022, 2124 |
| MboI | GATC | 5 cut(s) | 776, 1245, 1459, 2020, 2122 |
| MboII | GAAGA | 4 cut(s) | 448, 1750, 1849, 2132 |
| MfeI | CAATTG | 2 cut(s) | 2054, 2130 |
| MflI | RGATCY | 2 cut(s) | 1245, 2020 |
| MhlI | GDGCHC | 3 cut(s) | 1113, 1402, 1986 |
| MlsI | TGGCCA | 2 cut(s) | 480, 789 |
| MluNI | TGGCCA | 2 cut(s) | 480, 789 |
| MlyI | GAGTC | 4 cut(s) | 371, 1060, 1613, 1909 |
| MmeI | TCCRAC | 2 cut(s) | 985, 1959 |
| Mox20I | TGGCCA | 2 cut(s) | 480, 789 |
| MroI | TCCGGA | 1 cut(s) | 419 |
| MscI | TGGCCA | 2 cut(s) | 480, 789 |
| MseI | TTAA | 9 cut(s) | 153, 666, 686, 1319, 1416, 1428, 2013, 2144, 2163 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1925 |
| Msp20I | TGGCCA | 2 cut(s) | 480, 789 |
| MspCI | CTTAAG | 2 cut(s) | 1318, 1415 |
| MspI | CCGG | 1 cut(s) | 420 |
| MspR9I | CCNGG | 1 cut(s) | 555 |
| MunI | CAATTG | 2 cut(s) | 2054, 2130 |
| Mva1269I | GAATGC | 1 cut(s) | 445 |
| MvaI | CCWGG | 1 cut(s) | 555 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1007, 1668, 1892, 1959, 1997 |
| NcoI | CCATGG | 1 cut(s) | 1337 |
| NdeII | GATC | 5 cut(s) | 776, 1245, 1459, 2020, 2122 |
| NlaIV | GGNNCC | 7 cut(s) | 138, 459, 559, 1162, 1247, 1527, 1702 |
| NmuCI | GTSAC | 4 cut(s) | 353, 424, 1392, 1750 |
| NspI | RCATGY | 2 cut(s) | 18, 1675 |
| PaeI | GCATGC | 1 cut(s) | 1675 |
| PciI | ACATGT | 1 cut(s) | 14 |
| PctI | GAATGC | 1 cut(s) | 445 |
| PfeI | GAWTC | 2 cut(s) | 1378, 2090 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 291 |
| PkrI | GCNGC | 1 cut(s) | 1192 |
| PleI | GAGTC | 4 cut(s) | 371, 1060, 1613, 1909 |
| PmaCI | CACGTG | 1 cut(s) | 1397 |
| PmlI | CACGTG | 1 cut(s) | 1397 |
| PpsI | GAGTC | 4 cut(s) | 371, 1060, 1613, 1909 |
| Ppu21I | YACGTR | 1 cut(s) | 1397 |
| PpuMI | RGGWCCY | 1 cut(s) | 1526 |
| PscI | ACATGT | 1 cut(s) | 14 |
| Psp124BI | GAGCTC | 1 cut(s) | 1113 |
| Psp5II | RGGWCCY | 1 cut(s) | 1526 |
| Psp6I | CCWGG | 1 cut(s) | 553 |
| PspCI | CACGTG | 1 cut(s) | 1397 |
| PspGI | CCWGG | 1 cut(s) | 553 |
| PspN4I | GGNNCC | 7 cut(s) | 138, 459, 559, 1162, 1247, 1527, 1702 |
| PspPI | GGNCC | 5 cut(s) | 960, 1526, 1729, 1866, 1893 |
| PspPPI | RGGWCCY | 1 cut(s) | 1526 |
| PstNI | CAGNNNCTG | 1 cut(s) | 476 |
| PsuI | RGATCY | 2 cut(s) | 1245, 2020 |
| RsaI | GTAC | 5 cut(s) | 408, 459, 559, 1162, 1202 |
| RsaNI | GTAC | 5 cut(s) | 407, 458, 558, 1161, 1201 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1925 |
| SacI | GAGCTC | 1 cut(s) | 1113 |
| SaqAI | TTAA | 9 cut(s) | 153, 666, 686, 1319, 1416, 1428, 2013, 2144, 2163 |
| SatI | GCNGC | 1 cut(s) | 1191 |
| Sau3AI | GATC | 5 cut(s) | 776, 1245, 1459, 2020, 2122 |
| Sau96I | GGNCC | 5 cut(s) | 960, 1526, 1729, 1866, 1893 |
| ScaI | AGTACT | 1 cut(s) | 1202 |
| SchI | GAGTC | 4 cut(s) | 371, 1060, 1613, 1909 |
| ScrFI | CCNGG | 1 cut(s) | 555 |
| SduI | GDGCHC | 3 cut(s) | 1113, 1402, 1986 |
| SfaNI | GCATC | 5 cut(s) | 65, 252, 976, 1066, 1873 |
| SfcI | CTRYAG | 2 cut(s) | 1098, 1897 |
| SinI | GGWCC | 3 cut(s) | 960, 1526, 1866 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1925 |
| SmlI | CTYRAG | 7 cut(s) | 5, 240, 914, 1060, 1133, 1318, 1415 |
| SmoI | CTYRAG | 7 cut(s) | 5, 240, 914, 1060, 1133, 1318, 1415 |
| SphI | GCATGC | 1 cut(s) | 1675 |
| SsiI | CCGC | 3 cut(s) | 282, 302, 1346 |
| SspI | AATATT | 1 cut(s) | 1497 |
| SspMI | CTAG | 4 cut(s) | 347, 761, 1677, 2024 |
| SstI | GAGCTC | 1 cut(s) | 1113 |
| StyD4I | CCNGG | 1 cut(s) | 553 |
| StyI | CCWWGG | 3 cut(s) | 1164, 1229, 1337 |
| TaaI | ACNGT | 5 cut(s) | 430, 472, 1426, 1489, 1843 |
| TaiI | ACGT | 5 cut(s) | 360, 932, 1272, 1305, 1399 |
| TaqI | TCGA | 6 cut(s) | 775, 836, 1491, 1583, 1609, 1939 |
| TatI | WGTACW | 1 cut(s) | 1200 |
| TfiI | GAWTC | 2 cut(s) | 1378, 2090 |
| Tru1I | TTAA | 9 cut(s) | 153, 666, 686, 1319, 1416, 1428, 2013, 2144, 2163 |
| Tru9I | TTAA | 9 cut(s) | 153, 666, 686, 1319, 1416, 1428, 2013, 2144, 2163 |
| TscAI | CASTG | 2 cut(s) | 132, 216 |
| TseFI | GTSAC | 4 cut(s) | 353, 424, 1392, 1750 |
| TseI | GCWGC | 1 cut(s) | 1190 |
| Tsp45I | GTSAC | 4 cut(s) | 353, 424, 1392, 1750 |
| TspDTI | ATGAA | 8 cut(s) | 225, 465, 610, 727, 1461, 1510, 1527, 2030 |
| TspRI | CASTG | 2 cut(s) | 132, 216 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 291 |
| Vha464I | CTTAAG | 2 cut(s) | 1318, 1415 |
| VpaK11BI | GGWCC | 3 cut(s) | 960, 1526, 1866 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 565 |
| XapI | RAATTY | 1 cut(s) | 1262 |
| XbaI | TCTAGA | 1 cut(s) | 2023 |
| XceI | RCATGY | 2 cut(s) | 18, 1675 |
| XmiI | GTMKAC | 1 cut(s) | 183 |
| XspI | CTAG | 4 cut(s) | 347, 761, 1677, 2024 |
| ZraI | GACGTC | 2 cut(s) | 358, 930 |
| ZrmI | AGTACT | 1 cut(s) | 1202 |