transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 329 |
| AccII | CGCG | 1 cut(s) | 775 |
| AccIII | TCCGGA | 2 cut(s) | 922, 1003 |
| AciI | CCGC | 2 cut(s) | 773, 1047 |
| AcsI | RAATTY | 1 cut(s) | 683 |
| AcuI | CTGAAG | 2 cut(s) | 191, 519 |
| AcvI | CACGTG | 1 cut(s) | 1019 |
| AflII | CTTAAG | 1 cut(s) | 458 |
| AflIII | ACRYGT | 2 cut(s) | 586, 1016 |
| AgsI | TTSAA | 9 cut(s) | 61, 161, 254, 404, 451, 631, 639, 742, 803 |
| AluBI | AGCT | 6 cut(s) | 103, 206, 214, 655, 662, 1036 |
| AluI | AGCT | 6 cut(s) | 103, 206, 214, 655, 662, 1036 |
| Alw21I | GWGCWC | 2 cut(s) | 879, 1024 |
| Alw44I | GTGCAC | 1 cut(s) | 875 |
| Aor13HI | TCCGGA | 2 cut(s) | 922, 1003 |
| ApaLI | GTGCAC | 1 cut(s) | 875 |
| ApoI | RAATTY | 1 cut(s) | 683 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 365 |
| AsuHPI | GGTGA | 1 cut(s) | 160 |
| BaeGI | GKGCMC | 1 cut(s) | 879 |
| BanII | GRGCYC | 1 cut(s) | 155 |
| BbrPI | CACGTG | 1 cut(s) | 1019 |
| Bbv12I | GWGCWC | 2 cut(s) | 879, 1024 |
| BccI | CCATC | 1 cut(s) | 780 |
| BceAI | ACGGC | 2 cut(s) | 242, 492 |
| BciVI | GTATCC | 1 cut(s) | 783 |
| BclI | TGATCA | 1 cut(s) | 486 |
| BfaI | CTAG | 5 cut(s) | 180, 207, 215, 381, 560 |
| BfrI | CTTAAG | 1 cut(s) | 458 |
| BfuAI | ACCTGC | 1 cut(s) | 329 |
| BfuI | GTATCC | 1 cut(s) | 783 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 226 |
| BglII | AGATCT | 1 cut(s) | 689 |
| BmsI | GCATC | 4 cut(s) | 520, 610, 611, 754 |
| BpmI | CTGGAG | 1 cut(s) | 38 |
| BsaAI | YACGTR | 2 cut(s) | 911, 1019 |
| BsaJI | CCNNGG | 2 cut(s) | 474, 959 |
| BsaWI | WCCGGW | 2 cut(s) | 922, 1003 |
| BseAI | TCCGGA | 2 cut(s) | 922, 1003 |
| BseDI | CCNNGG | 2 cut(s) | 474, 959 |
| BseGI | GGATG | 4 cut(s) | 415, 900, 931, 1012 |
| BseMII | CTCAG | 1 cut(s) | 1037 |
| BseSI | GKGCMC | 1 cut(s) | 879 |
| BsgI | GTGCAG | 1 cut(s) | 573 |
| Bsh1236I | CGCG | 1 cut(s) | 775 |
| BsiHKAI | GWGCWC | 2 cut(s) | 879, 1024 |
| BsiSI | CCGG | 2 cut(s) | 923, 1004 |
| BsmI | GAATGC | 1 cut(s) | 446 |
| Bsp1286I | GDGCHC | 3 cut(s) | 155, 879, 1024 |
| Bsp13I | TCCGGA | 2 cut(s) | 922, 1003 |
| Bsp143I | GATC | 4 cut(s) | 486, 689, 819, 856 |
| BspACI | CCGC | 2 cut(s) | 773, 1047 |
| BspCNI | CTCAG | 1 cut(s) | 1036 |
| BspEI | TCCGGA | 2 cut(s) | 922, 1003 |
| BspFNI | CGCG | 1 cut(s) | 775 |
| BspHI | TCATGA | 1 cut(s) | 69 |
| BspMI | ACCTGC | 1 cut(s) | 329 |
| BspTI | CTTAAG | 1 cut(s) | 458 |
| BssECI | CCNNGG | 2 cut(s) | 474, 959 |
| BssMI | GATC | 4 cut(s) | 486, 689, 819, 856 |
| BssT1I | CCWWGG | 1 cut(s) | 959 |
| Bst4CI | ACNGT | 1 cut(s) | 190 |
| Bst6I | CTCTTC | 1 cut(s) | 426 |
| BstAFI | CTTAAG | 1 cut(s) | 458 |
| BstBAI | YACGTR | 2 cut(s) | 911, 1019 |
| BstDEI | CTNAG | 2 cut(s) | 863, 1023 |
| BstDSI | CCRYGG | 1 cut(s) | 474 |
| BstF5I | GGATG | 4 cut(s) | 415, 900, 931, 1012 |
| BstFNI | CGCG | 1 cut(s) | 775 |
| BstKTI | GATC | 4 cut(s) | 489, 692, 822, 859 |
| BstMBI | GATC | 4 cut(s) | 486, 689, 819, 856 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 226, 551 |
| BstNSI | RCATGY | 2 cut(s) | 338, 590 |
| BstSLI | GKGCMC | 1 cut(s) | 879 |
| BstUI | CGCG | 1 cut(s) | 775 |
| BstX2I | RGATCY | 1 cut(s) | 689 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 501 |
| BstYI | RGATCY | 1 cut(s) | 689 |
| BsuI | GTATCC | 1 cut(s) | 783 |
| BtgI | CCRYGG | 1 cut(s) | 474 |
| BtgZI | GCGATG | 1 cut(s) | 543 |
| BtsCI | GGATG | 4 cut(s) | 415, 900, 931, 1012 |
| BveI | ACCTGC | 1 cut(s) | 329 |
| CciI | TCATGA | 1 cut(s) | 69 |
| CviAII | CATG | 6 cut(s) | 70, 335, 482, 490, 587, 731 |
| CviJI | RGCY | 8 cut(s) | 103, 153, 206, 214, 479, 655, 662, 1036 |
| CviKI_1 | RGCY | 8 cut(s) | 103, 153, 206, 214, 479, 655, 662, 1036 |
| DdeI | CTNAG | 2 cut(s) | 863, 1023 |
| DpnI | GATC | 4 cut(s) | 488, 691, 821, 858 |
| DpnII | GATC | 4 cut(s) | 486, 689, 819, 856 |
| Eam1104I | CTCTTC | 1 cut(s) | 426 |
| EarI | CTCTTC | 1 cut(s) | 426 |
| Eco130I | CCWWGG | 1 cut(s) | 959 |
| Eco24I | GRGCYC | 1 cut(s) | 155 |
| Eco57I | CTGAAG | 2 cut(s) | 191, 519 |
| Eco72I | CACGTG | 1 cut(s) | 1019 |
| EcoT14I | CCWWGG | 1 cut(s) | 959 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 604 |
| EcoT38I | GRGCYC | 1 cut(s) | 155 |
| ErhI | CCWWGG | 1 cut(s) | 959 |
| FaeI | CATG | 6 cut(s) | 73, 338, 485, 493, 590, 734 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 261, 293, 1020, 1052 |
| FatI | CATG | 6 cut(s) | 69, 334, 481, 489, 586, 730 |
| FbaI | TGATCA | 1 cut(s) | 486 |
| FokI | GGATG | 4 cut(s) | 422, 887, 938, 1019 |
| FriOI | GRGCYC | 1 cut(s) | 155 |
| FspBI | CTAG | 5 cut(s) | 180, 207, 215, 381, 560 |
| GsuI | CTGGAG | 1 cut(s) | 38 |
| HapII | CCGG | 2 cut(s) | 923, 1004 |
| Hin1II | CATG | 6 cut(s) | 73, 338, 485, 493, 590, 734 |
| HincII | GTYRAC | 2 cut(s) | 115, 574 |
| HindII | GTYRAC | 2 cut(s) | 115, 574 |
| HindIII | AAGCTT | 2 cut(s) | 101, 1034 |
| HinfI | GANTC | 4 cut(s) | 10, 183, 777, 1000 |
| HpaII | CCGG | 2 cut(s) | 923, 1004 |
| HphI | GGTGA | 1 cut(s) | 160 |
| Hpy166II | GTNNAC | 4 cut(s) | 115, 509, 574, 877 |
| Hpy188I | TCNGA | 6 cut(s) | 136, 171, 538, 699, 727, 1026 |
| Hpy8I | GTNNAC | 4 cut(s) | 115, 509, 574, 877 |
| HpyAV | CCTTC | 2 cut(s) | 17, 355 |
| HpyCH4III | ACNGT | 1 cut(s) | 190 |
| HpyCH4IV | ACGT | 2 cut(s) | 910, 1018 |
| HpyCH4V | TGCA | 9 cut(s) | 4, 338, 554, 602, 623, 734, 767, 877, 968 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 226, 551 |
| HpyF3I | CTNAG | 2 cut(s) | 863, 1023 |
| HpySE526I | ACGT | 2 cut(s) | 910, 1018 |
| Hsp92II | CATG | 6 cut(s) | 73, 338, 485, 493, 590, 734 |
| Kpn2I | TCCGGA | 2 cut(s) | 922, 1003 |
| Ksp22I | TGATCA | 1 cut(s) | 486 |
| Kzo9I | GATC | 4 cut(s) | 486, 689, 819, 856 |
| LpnPI | CCDG | 7 cut(s) | 2, 168, 295, 324, 510, 936, 1017 |
| LweI | GCATC | 4 cut(s) | 520, 610, 611, 754 |
| MaeI | CTAG | 5 cut(s) | 180, 207, 215, 381, 560 |
| MaeII | ACGT | 2 cut(s) | 910, 1018 |
| MaeIII | GTNAC | 4 cut(s) | 184, 412, 949, 988 |
| MalI | GATC | 4 cut(s) | 488, 691, 821, 858 |
| MboI | GATC | 4 cut(s) | 486, 689, 819, 856 |
| MboII | GAAGA | 2 cut(s) | 443, 905 |
| MfeI | CAATTG | 2 cut(s) | 626, 932 |
| MflI | RGATCY | 1 cut(s) | 689 |
| MhlI | GDGCHC | 3 cut(s) | 155, 879, 1024 |
| MluCI | AATT | 6 cut(s) | 249, 626, 631, 683, 932, 979 |
| MlyI | GAGTC | 2 cut(s) | 192, 771 |
| MnlI | CCTC | 6 cut(s) | 13, 70, 85, 303, 307, 883 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 604 |
| MroI | TCCGGA | 2 cut(s) | 922, 1003 |
| MroXI | GAANNNNTTC | 1 cut(s) | 365 |
| MseI | TTAA | 4 cut(s) | 195, 459, 521, 944 |
| MspCI | CTTAAG | 1 cut(s) | 458 |
| MspI | CCGG | 2 cut(s) | 923, 1004 |
| MunI | CAATTG | 2 cut(s) | 626, 932 |
| Mva1269I | GAATGC | 1 cut(s) | 446 |
| MvnI | CGCG | 1 cut(s) | 775 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 226, 551 |
| NdeII | GATC | 4 cut(s) | 486, 689, 819, 856 |
| NlaIII | CATG | 6 cut(s) | 73, 338, 485, 493, 590, 734 |
| NmuCI | GTSAC | 2 cut(s) | 184, 988 |
| NsiI | ATGCAT | 2 cut(s) | 6, 604 |
| NspI | RCATGY | 2 cut(s) | 338, 590 |
| PagI | TCATGA | 1 cut(s) | 69 |
| PciI | ACATGT | 1 cut(s) | 586 |
| PctI | GAATGC | 1 cut(s) | 446 |
| PdmI | GAANNNNTTC | 1 cut(s) | 365 |
| PfeI | GAWTC | 2 cut(s) | 10, 1000 |
| PleI | GAGTC | 2 cut(s) | 191, 771 |
| PmaCI | CACGTG | 1 cut(s) | 1019 |
| PmlI | CACGTG | 1 cut(s) | 1019 |
| PpsI | GAGTC | 2 cut(s) | 191, 771 |
| Ppu21I | YACGTR | 2 cut(s) | 911, 1019 |
| PscI | ACATGT | 1 cut(s) | 586 |
| PspCI | CACGTG | 1 cut(s) | 1019 |
| PsuI | RGATCY | 1 cut(s) | 689 |
| SaqAI | TTAA | 4 cut(s) | 195, 459, 521, 944 |
| Sau3AI | GATC | 4 cut(s) | 486, 689, 819, 856 |
| SchI | GAGTC | 2 cut(s) | 192, 771 |
| SduI | GDGCHC | 3 cut(s) | 155, 879, 1024 |
| SfaNI | GCATC | 4 cut(s) | 520, 610, 611, 754 |
| SmlI | CTYRAG | 1 cut(s) | 458 |
| SmoI | CTYRAG | 1 cut(s) | 458 |
| Sse9I | AATT | 6 cut(s) | 249, 626, 631, 683, 932, 979 |
| SsiI | CCGC | 2 cut(s) | 773, 1047 |
| SspMI | CTAG | 5 cut(s) | 180, 207, 215, 381, 560 |
| StyI | CCWWGG | 1 cut(s) | 959 |
| TaaI | ACNGT | 1 cut(s) | 190 |
| TaiI | ACGT | 2 cut(s) | 913, 1021 |
| TaqI | TCGA | 1 cut(s) | 784 |
| TasI | AATT | 6 cut(s) | 249, 626, 631, 683, 932, 979 |
| TfiI | GAWTC | 2 cut(s) | 10, 1000 |
| Tru1I | TTAA | 4 cut(s) | 195, 459, 521, 944 |
| Tru9I | TTAA | 4 cut(s) | 195, 459, 521, 944 |
| TseFI | GTSAC | 2 cut(s) | 184, 988 |
| Tsp45I | GTSAC | 2 cut(s) | 184, 988 |
| TspDTI | ATGAA | 6 cut(s) | 216, 374, 440, 444, 889, 930 |
| Vha464I | CTTAAG | 1 cut(s) | 458 |
| VneI | GTGCAC | 1 cut(s) | 875 |
| XapI | RAATTY | 1 cut(s) | 683 |
| XbaI | TCTAGA | 3 cut(s) | 179, 380, 559 |
| XceI | RCATGY | 2 cut(s) | 338, 590 |
| XmnI | GAANNNNTTC | 1 cut(s) | 365 |
| XspI | CTAG | 5 cut(s) | 180, 207, 215, 381, 560 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 604 |