protein kinase activity
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 917 |
| Acc16I | TGCGCA | 1 cut(s) | 372 |
| Acc36I | ACCTGC | 1 cut(s) | 112 |
| Acc65I | GGTACC | 1 cut(s) | 1635 |
| AccB1I | GGYRCC | 2 cut(s) | 604, 1635 |
| AccIII | TCCGGA | 1 cut(s) | 1804 |
| AciI | CCGC | 1 cut(s) | 1004 |
| AclI | AACGTT | 2 cut(s) | 1737, 1879 |
| AclWI | GGATC | 3 cut(s) | 992, 1098, 1138 |
| AcsI | RAATTY | 5 cut(s) | 269, 377, 810, 1574, 1923 |
| AcuI | CTGAAG | 2 cut(s) | 576, 719 |
| AcyI | GRCGYC | 2 cut(s) | 918, 1779 |
| AfaI | GTAC | 4 cut(s) | 114, 1214, 1597, 1637 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 166, 219, 466, 1083 |
| AflII | CTTAAG | 2 cut(s) | 620, 1918 |
| AflIII | ACRYGT | 1 cut(s) | 505 |
| AjnI | CCWGG | 3 cut(s) | 1208, 1496, 1827 |
| AleI | CACNNNNGTG | 1 cut(s) | 992 |
| Alw21I | GWGCWC | 1 cut(s) | 474 |
| AlwI | GGATC | 3 cut(s) | 992, 1098, 1138 |
| Aor13HI | TCCGGA | 1 cut(s) | 1804 |
| AoxI | GGCC | 2 cut(s) | 1274, 1443 |
| ApeKI | GCWGC | 1 cut(s) | 1625 |
| ApoI | RAATTY | 5 cut(s) | 269, 377, 810, 1574, 1923 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1032, 1064 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1575 |
| Asp718I | GGTACC | 1 cut(s) | 1635 |
| AspA2I | CCTAGG | 1 cut(s) | 1664 |
| AspLEI | GCGC | 3 cut(s) | 257, 373, 1245 |
| AspS9I | GGNCC | 2 cut(s) | 1443, 1500 |
| AsuHPI | GGTGA | 4 cut(s) | 47, 140, 290, 945 |
| AsuII | TTCGAA | 1 cut(s) | 1317 |
| AvaII | GGWCC | 1 cut(s) | 1500 |
| AvrII | CCTAGG | 1 cut(s) | 1664 |
| AxyI | CCTNAGG | 2 cut(s) | 93, 462 |
| BaeGI | GKGCMC | 1 cut(s) | 1730 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 393, 426, 1587, 1620 |
| BanI | GGYRCC | 2 cut(s) | 604, 1635 |
| BanII | GRGCYC | 2 cut(s) | 177, 474 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 535, 567, 1767, 1799 |
| BbsI | GAAGAC | 3 cut(s) | 1146, 1280, 1782 |
| Bbv12I | GWGCWC | 1 cut(s) | 474 |
| BbvI | GCAGC | 1 cut(s) | 1637 |
| BccI | CCATC | 5 cut(s) | 160, 464, 844, 868, 1382 |
| BceAI | ACGGC | 3 cut(s) | 240, 492, 1430 |
| BciT130I | CCWGG | 3 cut(s) | 1210, 1498, 1829 |
| BciVI | GTATCC | 3 cut(s) | 327, 394, 1674 |
| BclI | TGATCA | 2 cut(s) | 1114, 1618 |
| BfmI | CTRYAG | 3 cut(s) | 1060, 1175, 1237 |
| BfoI | RGCGCY | 2 cut(s) | 258, 1246 |
| BfrI | CTTAAG | 2 cut(s) | 620, 1918 |
| BfuAI | ACCTGC | 1 cut(s) | 112 |
| BfuI | GTATCC | 3 cut(s) | 327, 394, 1674 |
| BisI | GCNGC | 1 cut(s) | 1626 |
| BlnI | CCTAGG | 1 cut(s) | 1664 |
| BlsI | GCNGC | 1 cut(s) | 1627 |
| Bme1390I | CCNGG | 3 cut(s) | 1210, 1498, 1829 |
| Bme18I | GGWCC | 1 cut(s) | 1500 |
| BmgT120I | GGNCC | 2 cut(s) | 1443, 1500 |
| BmiI | GGNNCC | 6 cut(s) | 174, 606, 829, 1444, 1502, 1637 |
| BmrFI | CCNGG | 3 cut(s) | 1210, 1498, 1829 |
| BmsI | GCATC | 8 cut(s) | 481, 720, 814, 1110, 1215, 1411, 1433, 1501 |
| BpiI | GAAGAC | 3 cut(s) | 1146, 1280, 1782 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 161, 193 |
| BpmI | CTGGAG | 1 cut(s) | 1192 |
| Bpu14I | TTCGAA | 1 cut(s) | 1317 |
| BpuEI | CTTGAG | 4 cut(s) | 539, 693, 839, 1774 |
| Bsa29I | ATCGAT | 1 cut(s) | 76 |
| BsaHI | GRCGYC | 2 cut(s) | 918, 1779 |
| BsaJI | CCNNGG | 2 cut(s) | 1664, 1841 |
| BsaWI | WCCGGW | 1 cut(s) | 1804 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 998, 1028 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 166, 219, 466, 1083 |
| Bse1I | ACTGG | 2 cut(s) | 956, 1042 |
| Bse21I | CCTNAGG | 2 cut(s) | 93, 462 |
| Bse3DI | GCAATG | 3 cut(s) | 315, 417, 1208 |
| BseAI | TCCGGA | 1 cut(s) | 1804 |
| BseBI | CCWGG | 3 cut(s) | 1210, 1498, 1829 |
| BseCI | ATCGAT | 1 cut(s) | 76 |
| BseDI | CCNNGG | 2 cut(s) | 1664, 1841 |
| BseGI | GGATG | 4 cut(s) | 115, 456, 1306, 1813 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 166, 219, 466, 1083 |
| BseMI | GCAATG | 3 cut(s) | 315, 417, 1208 |
| BseMII | CTCAG | 2 cut(s) | 948, 1037 |
| BseNI | ACTGG | 2 cut(s) | 956, 1042 |
| BseRI | GAGGAG | 2 cut(s) | 185, 482 |
| BseSI | GKGCMC | 1 cut(s) | 1730 |
| BseXI | GCAGC | 1 cut(s) | 1637 |
| BseYI | CCCAGC | 1 cut(s) | 142 |
| BsgI | GTGCAG | 2 cut(s) | 140, 1353 |
| BshFI | GGCC | 2 cut(s) | 1276, 1445 |
| BshNI | GGYRCC | 2 cut(s) | 604, 1635 |
| BshVI | ATCGAT | 1 cut(s) | 76 |
| BsiHKAI | GWGCWC | 1 cut(s) | 474 |
| BsiSI | CCGG | 1 cut(s) | 1805 |
| BslFI | GGGAC | 2 cut(s) | 195, 1178 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 166, 219, 466, 1083 |
| BsmFI | GGGAC | 2 cut(s) | 195, 1178 |
| BsmI | GAATGC | 3 cut(s) | 1006, 1189, 1337 |
| BsnI | GGCC | 2 cut(s) | 1276, 1445 |
| Bsp119I | TTCGAA | 1 cut(s) | 1317 |
| Bsp1286I | GDGCHC | 3 cut(s) | 177, 474, 1730 |
| Bsp13I | TCCGGA | 1 cut(s) | 1804 |
| Bsp143I | GATC | 9 cut(s) | 73, 77, 634, 984, 1090, 1114, 1130, 1618, 1710 |
| BspACI | CCGC | 1 cut(s) | 1004 |
| BspANI | GGCC | 2 cut(s) | 1276, 1445 |
| BspCNI | CTCAG | 2 cut(s) | 947, 1036 |
| BspDI | ATCGAT | 1 cut(s) | 76 |
| BspEI | TCCGGA | 1 cut(s) | 1804 |
| BspHI | TCATGA | 1 cut(s) | 216 |
| BspLI | GGNNCC | 6 cut(s) | 174, 606, 829, 1444, 1502, 1637 |
| BspMI | ACCTGC | 1 cut(s) | 112 |
| BspPI | GGATC | 3 cut(s) | 992, 1098, 1138 |
| BspT104I | TTCGAA | 1 cut(s) | 1317 |
| BspT107I | GGYRCC | 2 cut(s) | 604, 1635 |
| BspTI | CTTAAG | 2 cut(s) | 620, 1918 |
| BsrDI | GCAATG | 3 cut(s) | 315, 417, 1208 |
| BsrI | ACTGG | 2 cut(s) | 956, 1042 |
| BssECI | CCNNGG | 2 cut(s) | 1664, 1841 |
| BssMI | GATC | 9 cut(s) | 73, 77, 634, 984, 1090, 1114, 1130, 1618, 1710 |
| BssNI | GRCGYC | 2 cut(s) | 918, 1779 |
| BssT1I | CCWWGG | 2 cut(s) | 1664, 1841 |
| Bst2UI | CCWGG | 3 cut(s) | 1210, 1498, 1829 |
| Bst4CI | ACNGT | 4 cut(s) | 278, 914, 991, 1033 |
| Bst6I | CTCTTC | 2 cut(s) | 1314, 1823 |
| BstACI | GRCGYC | 2 cut(s) | 918, 1779 |
| BstAFI | CTTAAG | 2 cut(s) | 620, 1918 |
| BstBI | TTCGAA | 1 cut(s) | 1317 |
| BstC8I | GCNNGC | 1 cut(s) | 1901 |
| BstDEI | CTNAG | 7 cut(s) | 93, 462, 934, 942, 1023, 1567, 1789 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 217 |
| BstF5I | GGATG | 4 cut(s) | 115, 456, 1306, 1813 |
| BstH2I | RGCGCY | 2 cut(s) | 258, 1246 |
| BstHHI | GCGC | 3 cut(s) | 257, 373, 1245 |
| BstKTI | GATC | 9 cut(s) | 76, 80, 637, 987, 1093, 1117, 1133, 1621, 1713 |
| BstMBI | GATC | 9 cut(s) | 73, 77, 634, 984, 1090, 1114, 1130, 1618, 1710 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 199, 739, 1442, 1909 |
| BstNI | CCWGG | 3 cut(s) | 1210, 1498, 1829 |
| BstNSI | RCATGY | 3 cut(s) | 509, 1156, 1903 |
| BstSCI | CCNGG | 3 cut(s) | 1208, 1496, 1827 |
| BstSFI | CTRYAG | 3 cut(s) | 1060, 1175, 1237 |
| BstSLI | GKGCMC | 1 cut(s) | 1730 |
| BstV1I | GCAGC | 1 cut(s) | 1637 |
| BstV2I | GAAGAC | 3 cut(s) | 1146, 1280, 1782 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1392 |
| Bsu15I | ATCGAT | 1 cut(s) | 76 |
| Bsu36I | CCTNAGG | 2 cut(s) | 93, 462 |
| BsuI | GTATCC | 3 cut(s) | 327, 394, 1674 |
| BsuRI | GGCC | 2 cut(s) | 1276, 1445 |
| BsuTUI | ATCGAT | 1 cut(s) | 76 |
| BtsCI | GGATG | 4 cut(s) | 115, 456, 1306, 1813 |
| BtsIMutI | CAGTG | 1 cut(s) | 600 |
| BveI | ACCTGC | 1 cut(s) | 112 |
| Cac8I | GCNNGC | 1 cut(s) | 1901 |
| CciI | TCATGA | 1 cut(s) | 216 |
| CfoI | GCGC | 3 cut(s) | 257, 373, 1245 |
| Cfr13I | GGNCC | 2 cut(s) | 1443, 1500 |
| ClaI | ATCGAT | 1 cut(s) | 76 |
| CseI | GACGC | 3 cut(s) | 907, 1482, 1787 |
| Csp6I | GTAC | 4 cut(s) | 113, 1213, 1596, 1636 |
| CviQI | GTAC | 4 cut(s) | 113, 1213, 1596, 1636 |
| DdeI | CTNAG | 7 cut(s) | 93, 462, 934, 942, 1023, 1567, 1789 |
| DpnI | GATC | 9 cut(s) | 75, 79, 636, 986, 1092, 1116, 1132, 1620, 1712 |
| DpnII | GATC | 9 cut(s) | 73, 77, 634, 984, 1090, 1114, 1130, 1618, 1710 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 917 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 917 |
| Eam1104I | CTCTTC | 2 cut(s) | 1314, 1823 |
| EarI | CTCTTC | 2 cut(s) | 1314, 1823 |
| Ecl136II | GAGCTC | 1 cut(s) | 472 |
| Eco130I | CCWWGG | 2 cut(s) | 1664, 1841 |
| Eco24I | GRGCYC | 2 cut(s) | 177, 474 |
| Eco32I | GATATC | 1 cut(s) | 775 |
| Eco47I | GGWCC | 1 cut(s) | 1500 |
| Eco53kI | GAGCTC | 1 cut(s) | 472 |
| Eco57I | CTGAAG | 2 cut(s) | 576, 719 |
| Eco81I | CCTNAGG | 2 cut(s) | 93, 462 |
| EcoICRI | GAGCTC | 1 cut(s) | 472 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 217 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1500 |
| EcoRI | GAATTC | 1 cut(s) | 810 |
| EcoRII | CCWGG | 3 cut(s) | 1208, 1496, 1827 |
| EcoRV | GATATC | 1 cut(s) | 775 |
| EcoT14I | CCWWGG | 2 cut(s) | 1664, 1841 |
| EcoT22I | ATGCAT | 3 cut(s) | 88, 1230, 1426 |
| EcoT38I | GRGCYC | 2 cut(s) | 177, 474 |
| ErhI | CCWWGG | 2 cut(s) | 1664, 1841 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1079, 1111, 1131, 1163, 1172, 1204, 1825, 1857 |
| FaqI | GGGAC | 2 cut(s) | 195, 1178 |
| FbaI | TGATCA | 2 cut(s) | 1114, 1618 |
| Fnu4HI | GCNGC | 1 cut(s) | 1626 |
| FokI | GGATG | 4 cut(s) | 122, 443, 1313, 1820 |
| FriOI | GRGCYC | 2 cut(s) | 177, 474 |
| Fsp4HI | GCNGC | 1 cut(s) | 1626 |
| FspI | TGCGCA | 1 cut(s) | 372 |
| GlaI | GCGC | 3 cut(s) | 256, 372, 1244 |
| GluI | GCNGC | 1 cut(s) | 1626 |
| GsaI | CCCAGC | 1 cut(s) | 146 |
| GsuI | CTGGAG | 1 cut(s) | 1192 |
| HaeII | RGCGCY | 2 cut(s) | 258, 1246 |
| HaeIII | GGCC | 2 cut(s) | 1276, 1445 |
| HapII | CCGG | 1 cut(s) | 1805 |
| HgaI | GACGC | 3 cut(s) | 907, 1482, 1787 |
| HhaI | GCGC | 3 cut(s) | 257, 373, 1245 |
| Hin1I | GRCGYC | 2 cut(s) | 918, 1779 |
| Hin6I | GCGC | 3 cut(s) | 255, 371, 1243 |
| HinP1I | GCGC | 3 cut(s) | 255, 371, 1243 |
| HincII | GTYRAC | 2 cut(s) | 189, 705 |
| HindII | GTYRAC | 2 cut(s) | 189, 705 |
| HindIII | AAGCTT | 1 cut(s) | 902 |
| HinfI | GANTC | 3 cut(s) | 598, 938, 1824 |
| HpaII | CCGG | 1 cut(s) | 1805 |
| HphI | GGTGA | 4 cut(s) | 47, 140, 290, 945 |
| Hpy166II | GTNNAC | 2 cut(s) | 189, 705 |
| Hpy188I | TCNGA | 9 cut(s) | 328, 738, 937, 1026, 1119, 1362, 1429, 1618, 1823 |
| Hpy188III | TCNNGA | 7 cut(s) | 217, 518, 710, 908, 1134, 1694, 1805 |
| Hpy8I | GTNNAC | 2 cut(s) | 189, 705 |
| HpyCH4III | ACNGT | 4 cut(s) | 278, 914, 991, 1033 |
| HpyCH4IV | ACGT | 8 cut(s) | 156, 701, 856, 1167, 1215, 1737, 1879, 1908 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 199, 739, 1442, 1909 |
| HpyF3I | CTNAG | 7 cut(s) | 93, 462, 934, 942, 1023, 1567, 1789 |
| HpySE526I | ACGT | 8 cut(s) | 156, 701, 856, 1167, 1215, 1737, 1879, 1908 |
| Hsp92I | GRCGYC | 2 cut(s) | 918, 1779 |
| HspAI | GCGC | 3 cut(s) | 255, 371, 1243 |
| Kpn2I | TCCGGA | 1 cut(s) | 1804 |
| KpnI | GGTACC | 1 cut(s) | 1639 |
| Ksp22I | TGATCA | 2 cut(s) | 1114, 1618 |
| Kzo9I | GATC | 9 cut(s) | 73, 77, 634, 984, 1090, 1114, 1130, 1618, 1710 |
| LmnI | GCTCC | 4 cut(s) | 172, 469, 827, 1211 |
| Lsp1109I | GCAGC | 1 cut(s) | 1637 |
| LweI | GCATC | 8 cut(s) | 481, 720, 814, 1110, 1215, 1411, 1433, 1501 |
| MaeII | ACGT | 8 cut(s) | 156, 701, 856, 1167, 1215, 1737, 1879, 1908 |
| MaeIII | GTNAC | 2 cut(s) | 1033, 1395 |
| MalI | GATC | 9 cut(s) | 75, 79, 636, 986, 1092, 1116, 1132, 1620, 1712 |
| MboI | GATC | 9 cut(s) | 73, 77, 634, 984, 1090, 1114, 1130, 1618, 1710 |
| MboII | GAAGA | 9 cut(s) | 130, 543, 1009, 1151, 1192, 1280, 1331, 1787, 1810 |
| MfeI | CAATTG | 1 cut(s) | 753 |
| MhlI | GDGCHC | 3 cut(s) | 177, 474, 1730 |
| MlyI | GAGTC | 1 cut(s) | 932 |
| MmeI | TCCRAC | 3 cut(s) | 412, 740, 1658 |
| Mph1103I | ATGCAT | 3 cut(s) | 88, 1230, 1426 |
| MroI | TCCGGA | 1 cut(s) | 1804 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1575 |
| MseI | TTAA | 6 cut(s) | 42, 621, 698, 1631, 1860, 1919 |
| MslI | CAYNNNNRTG | 4 cut(s) | 51, 386, 489, 992 |
| MspA1I | CMGCKG | 1 cut(s) | 146 |
| MspCI | CTTAAG | 2 cut(s) | 620, 1918 |
| MspI | CCGG | 1 cut(s) | 1805 |
| MspR9I | CCNGG | 3 cut(s) | 1210, 1498, 1829 |
| MunI | CAATTG | 1 cut(s) | 753 |
| Mva1269I | GAATGC | 3 cut(s) | 1006, 1189, 1337 |
| MvaI | CCWGG | 3 cut(s) | 1210, 1498, 1829 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 199, 739, 1442, 1909 |
| NdeII | GATC | 9 cut(s) | 73, 77, 634, 984, 1090, 1114, 1130, 1618, 1710 |
| NlaIV | GGNNCC | 6 cut(s) | 174, 606, 829, 1444, 1502, 1637 |
| NmuCI | GTSAC | 2 cut(s) | 1033, 1395 |
| NsbI | TGCGCA | 1 cut(s) | 372 |
| NsiI | ATGCAT | 3 cut(s) | 88, 1230, 1426 |
| NspI | RCATGY | 3 cut(s) | 509, 1156, 1903 |
| NspV | TTCGAA | 1 cut(s) | 1317 |
| OliI | CACNNNNGTG | 1 cut(s) | 992 |
| PaeI | GCATGC | 1 cut(s) | 1903 |
| PagI | TCATGA | 1 cut(s) | 216 |
| PciI | ACATGT | 1 cut(s) | 505 |
| PctI | GAATGC | 3 cut(s) | 1006, 1189, 1337 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1575 |
| PfeI | GAWTC | 2 cut(s) | 598, 1824 |
| PfoI | TCCNGGA | 1 cut(s) | 1496 |
| PkrI | GCNGC | 1 cut(s) | 1627 |
| PleI | GAGTC | 1 cut(s) | 932 |
| PpsI | GAGTC | 1 cut(s) | 932 |
| PpuMI | RGGWCCY | 1 cut(s) | 1500 |
| PscI | ACATGT | 1 cut(s) | 505 |
| Psp124BI | GAGCTC | 1 cut(s) | 474 |
| Psp1406I | AACGTT | 2 cut(s) | 1737, 1879 |
| Psp5II | RGGWCCY | 1 cut(s) | 1500 |
| Psp6I | CCWGG | 3 cut(s) | 1208, 1496, 1827 |
| PspFI | CCCAGC | 1 cut(s) | 142 |
| PspGI | CCWGG | 3 cut(s) | 1208, 1496, 1827 |
| PspN4I | GGNNCC | 6 cut(s) | 174, 606, 829, 1444, 1502, 1637 |
| PspPI | GGNCC | 2 cut(s) | 1443, 1500 |
| PspPPI | RGGWCCY | 1 cut(s) | 1500 |
| PvuII | CAGCTG | 1 cut(s) | 146 |
| RsaI | GTAC | 4 cut(s) | 114, 1214, 1597, 1637 |
| RsaNI | GTAC | 4 cut(s) | 113, 1213, 1596, 1636 |
| RseI | CAYNNNNRTG | 4 cut(s) | 51, 386, 489, 992 |
| SacI | GAGCTC | 1 cut(s) | 474 |
| SaqAI | TTAA | 6 cut(s) | 42, 621, 698, 1631, 1860, 1919 |
| SatI | GCNGC | 1 cut(s) | 1626 |
| Sau3AI | GATC | 9 cut(s) | 73, 77, 634, 984, 1090, 1114, 1130, 1618, 1710 |
| Sau96I | GGNCC | 2 cut(s) | 1443, 1500 |
| SchI | GAGTC | 1 cut(s) | 932 |
| ScrFI | CCNGG | 3 cut(s) | 1210, 1498, 1829 |
| SduI | GDGCHC | 3 cut(s) | 177, 474, 1730 |
| SfaNI | GCATC | 8 cut(s) | 481, 720, 814, 1110, 1215, 1411, 1433, 1501 |
| SfcI | CTRYAG | 3 cut(s) | 1060, 1175, 1237 |
| SfuI | TTCGAA | 1 cut(s) | 1317 |
| SinI | GGWCC | 1 cut(s) | 1500 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 51, 386, 489, 992 |
| SmlI | CTYRAG | 6 cut(s) | 518, 620, 708, 818, 1753, 1918 |
| SmoI | CTYRAG | 6 cut(s) | 518, 620, 708, 818, 1753, 1918 |
| SphI | GCATGC | 1 cut(s) | 1903 |
| SsiI | CCGC | 1 cut(s) | 1004 |
| SstI | GAGCTC | 1 cut(s) | 474 |
| StyD4I | CCNGG | 3 cut(s) | 1208, 1496, 1827 |
| StyI | CCWWGG | 2 cut(s) | 1664, 1841 |
| TaaI | ACNGT | 4 cut(s) | 278, 914, 991, 1033 |
| TaiI | ACGT | 8 cut(s) | 159, 704, 859, 1170, 1218, 1740, 1882, 1911 |
| TaqI | TCGA | 4 cut(s) | 76, 808, 1045, 1317 |
| TatI | WGTACW | 1 cut(s) | 112 |
| TfiI | GAWTC | 2 cut(s) | 598, 1824 |
| Tru1I | TTAA | 6 cut(s) | 42, 621, 698, 1631, 1860, 1919 |
| Tru9I | TTAA | 6 cut(s) | 42, 621, 698, 1631, 1860, 1919 |
| TscAI | CASTG | 1 cut(s) | 600 |
| TseFI | GTSAC | 2 cut(s) | 1033, 1395 |
| TseI | GCWGC | 1 cut(s) | 1625 |
| Tsp45I | GTSAC | 2 cut(s) | 1033, 1395 |
| TspRI | CASTG | 1 cut(s) | 600 |
| Vha464I | CTTAAG | 2 cut(s) | 620, 1918 |
| VpaK11BI | GGWCC | 1 cut(s) | 1500 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 217 |
| XapI | RAATTY | 5 cut(s) | 269, 377, 810, 1574, 1923 |
| XceI | RCATGY | 3 cut(s) | 509, 1156, 1903 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1789 |
| XmaJI | CCTAGG | 1 cut(s) | 1664 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1575 |
| Zsp2I | ATGCAT | 3 cut(s) | 88, 1230, 1426 |