transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 329 |
| AccIII | TCCGGA | 1 cut(s) | 394 |
| AclWI | GGATC | 3 cut(s) | 179, 294, 432 |
| AcyI | GRCGYC | 1 cut(s) | 32 |
| AfaI | GTAC | 1 cut(s) | 118 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 255, 329 |
| AluBI | AGCT | 1 cut(s) | 359 |
| AluI | AGCT | 1 cut(s) | 359 |
| Alw26I | GTCTC | 1 cut(s) | 208 |
| AlwI | GGATC | 3 cut(s) | 179, 294, 432 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 194 |
| Aor13HI | TCCGGA | 1 cut(s) | 394 |
| ApeKI | GCWGC | 1 cut(s) | 161 |
| AsuII | TTCGAA | 1 cut(s) | 420 |
| BbvI | GCAGC | 1 cut(s) | 173 |
| BceAI | ACGGC | 1 cut(s) | 19 |
| BcoDI | GTCTC | 1 cut(s) | 208 |
| BfaI | CTAG | 1 cut(s) | 153 |
| BfmI | CTRYAG | 3 cut(s) | 120, 233, 251 |
| BisI | GCNGC | 1 cut(s) | 162 |
| BlsI | GCNGC | 1 cut(s) | 163 |
| BmcAI | AGTACT | 1 cut(s) | 118 |
| BmiI | GGNNCC | 1 cut(s) | 243 |
| Bpu10I | CCTNAGC | 1 cut(s) | 195 |
| Bpu14I | TTCGAA | 1 cut(s) | 420 |
| BsaHI | GRCGYC | 1 cut(s) | 32 |
| BsaWI | WCCGGW | 1 cut(s) | 394 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 395, 425 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 255, 329 |
| BseAI | TCCGGA | 1 cut(s) | 394 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 255, 329 |
| BseMII | CTCAG | 2 cut(s) | 186, 273 |
| BseRI | GAGGAG | 1 cut(s) | 226 |
| BseXI | GCAGC | 1 cut(s) | 173 |
| BsgI | GTGCAG | 1 cut(s) | 275 |
| BsiSI | CCGG | 1 cut(s) | 395 |
| BslFI | GGGAC | 1 cut(s) | 271 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 255, 329 |
| BsmAI | GTCTC | 1 cut(s) | 208 |
| BsmBI | CGTCTC | 1 cut(s) | 208 |
| BsmFI | GGGAC | 1 cut(s) | 271 |
| BsmI | GAATGC | 1 cut(s) | 416 |
| Bsp119I | TTCGAA | 1 cut(s) | 420 |
| Bsp13I | TCCGGA | 1 cut(s) | 394 |
| Bsp143I | GATC | 4 cut(s) | 155, 184, 286, 437 |
| BspCNI | CTCAG | 2 cut(s) | 187, 274 |
| BspEI | TCCGGA | 1 cut(s) | 394 |
| BspLI | GGNNCC | 1 cut(s) | 243 |
| BspMAI | CTGCAG | 3 cut(s) | 124, 237, 255 |
| BspPI | GGATC | 3 cut(s) | 179, 294, 432 |
| BspT104I | TTCGAA | 1 cut(s) | 420 |
| BssMI | GATC | 4 cut(s) | 155, 184, 286, 437 |
| BssNI | GRCGYC | 1 cut(s) | 32 |
| Bst4CI | ACNGT | 1 cut(s) | 296 |
| BstACI | GRCGYC | 1 cut(s) | 32 |
| BstBI | TTCGAA | 1 cut(s) | 420 |
| BstDEI | CTNAG | 2 cut(s) | 195, 282 |
| BstKTI | GATC | 4 cut(s) | 158, 187, 289, 440 |
| BstMAI | GTCTC | 1 cut(s) | 208 |
| BstMBI | GATC | 4 cut(s) | 155, 184, 286, 437 |
| BstSFI | CTRYAG | 3 cut(s) | 120, 233, 251 |
| BstV1I | GCAGC | 1 cut(s) | 173 |
| BstX2I | RGATCY | 1 cut(s) | 286 |
| BstYI | RGATCY | 1 cut(s) | 286 |
| BtsI | GCAGTG | 1 cut(s) | 242 |
| BtsIMutI | CAGTG | 2 cut(s) | 242, 301 |
| CaiI | CAGNNNCTG | 1 cut(s) | 194 |
| CseI | GACGC | 2 cut(s) | 40, 225 |
| Csp6I | GTAC | 1 cut(s) | 117 |
| CviAII | CATG | 2 cut(s) | 142, 362 |
| CviJI | RGCY | 1 cut(s) | 359 |
| CviKI_1 | RGCY | 1 cut(s) | 359 |
| CviQI | GTAC | 1 cut(s) | 117 |
| DdeI | CTNAG | 2 cut(s) | 195, 282 |
| DpnI | GATC | 4 cut(s) | 157, 186, 288, 439 |
| DpnII | GATC | 4 cut(s) | 155, 184, 286, 437 |
| Esp3I | CGTCTC | 1 cut(s) | 208 |
| FaeI | CATG | 2 cut(s) | 145, 365 |
| FaiI | YATR | 4 cut(s) | 48, 143, 363, 374 |
| FaqI | GGGAC | 1 cut(s) | 271 |
| FatI | CATG | 2 cut(s) | 141, 361 |
| Fnu4HI | GCNGC | 1 cut(s) | 162 |
| Fsp4HI | GCNGC | 1 cut(s) | 162 |
| FspBI | CTAG | 1 cut(s) | 153 |
| GluI | GCNGC | 1 cut(s) | 162 |
| HapII | CCGG | 1 cut(s) | 395 |
| HgaI | GACGC | 2 cut(s) | 40, 225 |
| Hin1I | GRCGYC | 1 cut(s) | 32 |
| Hin1II | CATG | 2 cut(s) | 145, 365 |
| HincII | GTYRAC | 1 cut(s) | 335 |
| HindII | GTYRAC | 1 cut(s) | 335 |
| HinfI | GANTC | 2 cut(s) | 175, 347 |
| HpaII | CCGG | 1 cut(s) | 395 |
| Hpy166II | GTNNAC | 1 cut(s) | 335 |
| Hpy188I | TCNGA | 2 cut(s) | 149, 283 |
| Hpy188III | TCNNGA | 4 cut(s) | 22, 188, 323, 395 |
| Hpy8I | GTNNAC | 1 cut(s) | 335 |
| Hpy99I | CGWCG | 1 cut(s) | 438 |
| HpyAV | CCTTC | 2 cut(s) | 255, 401 |
| HpyCH4III | ACNGT | 1 cut(s) | 296 |
| HpyCH4V | TGCA | 7 cut(s) | 122, 141, 235, 253, 292, 384, 416 |
| HpyF3I | CTNAG | 2 cut(s) | 195, 282 |
| Hsp92I | GRCGYC | 1 cut(s) | 32 |
| Hsp92II | CATG | 2 cut(s) | 145, 365 |
| Kpn2I | TCCGGA | 1 cut(s) | 394 |
| Kzo9I | GATC | 4 cut(s) | 155, 184, 286, 437 |
| LpnPI | CCDG | 7 cut(s) | 201, 205, 207, 239, 263, 336, 408 |
| Lsp1109I | GCAGC | 1 cut(s) | 173 |
| MaeI | CTAG | 1 cut(s) | 153 |
| MalI | GATC | 4 cut(s) | 157, 186, 288, 439 |
| MboI | GATC | 4 cut(s) | 155, 184, 286, 437 |
| MflI | RGATCY | 1 cut(s) | 286 |
| MluCI | AATT | 2 cut(s) | 75, 170 |
| MnlI | CCTC | 4 cut(s) | 204, 277, 319, 397 |
| MroI | TCCGGA | 1 cut(s) | 394 |
| MseI | TTAA | 1 cut(s) | 353 |
| MspI | CCGG | 1 cut(s) | 395 |
| Mva1269I | GAATGC | 1 cut(s) | 416 |
| NdeII | GATC | 4 cut(s) | 155, 184, 286, 437 |
| NlaIII | CATG | 2 cut(s) | 145, 365 |
| NlaIV | GGNNCC | 1 cut(s) | 243 |
| NspV | TTCGAA | 1 cut(s) | 420 |
| PctI | GAATGC | 1 cut(s) | 416 |
| PfeI | GAWTC | 2 cut(s) | 175, 347 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 329 |
| PkrI | GCNGC | 1 cut(s) | 163 |
| PspN4I | GGNNCC | 1 cut(s) | 243 |
| PstI | CTGCAG | 3 cut(s) | 124, 237, 255 |
| PstNI | CAGNNNCTG | 1 cut(s) | 194 |
| PsuI | RGATCY | 1 cut(s) | 286 |
| RsaI | GTAC | 1 cut(s) | 118 |
| RsaNI | GTAC | 1 cut(s) | 117 |
| SaqAI | TTAA | 1 cut(s) | 353 |
| SatI | GCNGC | 1 cut(s) | 162 |
| Sau3AI | GATC | 4 cut(s) | 155, 184, 286, 437 |
| SbfI | CCTGCAGG | 1 cut(s) | 255 |
| ScaI | AGTACT | 1 cut(s) | 118 |
| SdaI | CCTGCAGG | 1 cut(s) | 255 |
| SetI | ASST | 3 cut(s) | 196, 340, 361 |
| SfcI | CTRYAG | 3 cut(s) | 120, 233, 251 |
| SfuI | TTCGAA | 1 cut(s) | 420 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 255 |
| Sse9I | AATT | 2 cut(s) | 75, 170 |
| SspMI | CTAG | 1 cut(s) | 153 |
| TaaI | ACNGT | 1 cut(s) | 296 |
| TaqI | TCGA | 1 cut(s) | 420 |
| TasI | AATT | 2 cut(s) | 75, 170 |
| TatI | WGTACW | 1 cut(s) | 116 |
| TfiI | GAWTC | 2 cut(s) | 175, 347 |
| Tru1I | TTAA | 1 cut(s) | 353 |
| Tru9I | TTAA | 1 cut(s) | 353 |
| TscAI | CASTG | 2 cut(s) | 242, 301 |
| TseI | GCWGC | 1 cut(s) | 161 |
| TspDTI | ATGAA | 2 cut(s) | 80, 339 |
| TspRI | CASTG | 2 cut(s) | 242, 301 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 329 |
| XspI | CTAG | 1 cut(s) | 153 |
| ZrmI | AGTACT | 1 cut(s) | 118 |