protein kinase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 784 - 939 | 2e-26 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 1002 - 1100 | 3.3e-33 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 1027 - 1130 | 2.9e-36 | RNase H-like domain found in reverse transcriptase |
| Integrase_H2C2 | PF17921 | 1230 - 1287 | 5.2e-11 | Integrase zinc binding domain |
| rve | PF00665 | 1308 - 1391 | 3.5e-12 | Integrase core domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1362 |
| AarI | CACCTGC | 1 cut(s) | 112 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2678 |
| AatII | GACGTC | 1 cut(s) | 2173 |
| Acc36I | ACCTGC | 5 cut(s) | 112, 1065, 1465, 1717, 4046 |
| Acc65I | GGTACC | 2 cut(s) | 553, 1668 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 754, 2073, 2437, 4261 |
| AccI | GTMKAC | 3 cut(s) | 236, 2173, 3088 |
| AccII | CGCG | 3 cut(s) | 858, 1724, 1964 |
| AccIII | TCCGGA | 1 cut(s) | 3076 |
| AclI | AACGTT | 1 cut(s) | 261 |
| AclWI | GGATC | 9 cut(s) | 78, 91, 2105, 2119, 2132, 2412, 2526, 3377, 4496 |
| AcoI | YGGCCR | 2 cut(s) | 2911, 4177 |
| AcsI | RAATTY | 2 cut(s) | 514, 3915 |
| AcuI | CTGAAG | 3 cut(s) | 1758, 3365, 4178 |
| AcvI | CACGTG | 2 cut(s) | 2112, 4100 |
| AcyI | GRCGYC | 3 cut(s) | 1561, 2142, 2170 |
| AfeI | AGCGCT | 1 cut(s) | 2444 |
| AflII | CTTAAG | 2 cut(s) | 1394, 4583 |
| AflIII | ACRYGT | 6 cut(s) | 1596, 1962, 2043, 2111, 4099, 4785 |
| AhlI | ACTAGT | 1 cut(s) | 862 |
| AjiI | CACGTC | 3 cut(s) | 1597, 2044, 4786 |
| AleI | CACNNNNGTG | 1 cut(s) | 2885 |
| Alw21I | GWGCWC | 4 cut(s) | 305, 828, 4371, 4746 |
| Alw26I | GTCTC | 7 cut(s) | 252, 441, 484, 1976, 2269, 4320, 4718 |
| AlwI | GGATC | 9 cut(s) | 78, 91, 2105, 2119, 2132, 2412, 2526, 3377, 4496 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3698 |
| Ama87I | CYCGRG | 3 cut(s) | 403, 4217, 4594 |
| Aor13HI | TCCGGA | 1 cut(s) | 3076 |
| Aor51HI | AGCGCT | 1 cut(s) | 2444 |
| ApaI | GGGCCC | 2 cut(s) | 3950, 4235 |
| ApeKI | GCWGC | 6 cut(s) | 71, 74, 650, 3314, 3417, 3502 |
| ApoI | RAATTY | 2 cut(s) | 514, 3915 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1295, 1327, 2981, 3013 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 4691 |
| Asp718I | GGTACC | 2 cut(s) | 553, 1668 |
| AspA2I | CCTAGG | 3 cut(s) | 376, 1378, 1969 |
| AspLEI | GCGC | 7 cut(s) | 139, 525, 858, 1726, 2144, 2445, 2571 |
| AsuC2I | CCSGG | 3 cut(s) | 438, 4595, 4596 |
| AvaI | CYCGRG | 3 cut(s) | 403, 4217, 4594 |
| AvaII | GGWCC | 7 cut(s) | 12, 955, 1267, 2553, 3189, 3436, 4170 |
| AvrII | CCTAGG | 3 cut(s) | 376, 1378, 1969 |
| AxyI | CCTNAGG | 1 cut(s) | 549 |
| BaeGI | GKGCMC | 7 cut(s) | 318, 2286, 2337, 2977, 3531, 3950, 4235 |
| BalI | TGGCCA | 2 cut(s) | 2913, 4179 |
| BamHI | GGATCC | 2 cut(s) | 83, 2124 |
| BanII | GRGCYC | 5 cut(s) | 444, 883, 3645, 3950, 4235 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4407, 4439 |
| BauI | CACGAG | 1 cut(s) | 2513 |
| BbrPI | CACGTG | 2 cut(s) | 2112, 4100 |
| BbsI | GAAGAC | 7 cut(s) | 222, 924, 2534, 3471, 4229, 4508, 4685 |
| Bbv12I | GWGCWC | 4 cut(s) | 305, 828, 4371, 4746 |
| BbvCI | CCTCAGC | 1 cut(s) | 996 |
| BbvI | GCAGC | 6 cut(s) | 58, 61, 637, 3326, 3429, 3514 |
| BccI | CCATC | 8 cut(s) | 351, 845, 1491, 1622, 2132, 3071, 3360, 4109 |
| BceAI | ACGGC | 3 cut(s) | 690, 3072, 4305 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2560, 2594 |
| BciVI | GTATCC | 2 cut(s) | 4201, 4206 |
| BclI | TGATCA | 4 cut(s) | 1105, 1995, 2211, 3333 |
| BcnI | CCSGG | 3 cut(s) | 438, 4595, 4596 |
| BcoDI | GTCTC | 7 cut(s) | 252, 441, 484, 1976, 2269, 4320, 4718 |
| BcuI | ACTAGT | 1 cut(s) | 862 |
| BfmI | CTRYAG | 5 cut(s) | 3243, 3479, 4282, 4436, 4659 |
| BfoI | RGCGCY | 3 cut(s) | 526, 2145, 2446 |
| BfrI | CTTAAG | 2 cut(s) | 1394, 4583 |
| BfuAI | ACCTGC | 5 cut(s) | 112, 1065, 1465, 1717, 4046 |
| BfuI | GTATCC | 2 cut(s) | 4201, 4206 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 899, 4382 |
| BglII | AGATCT | 2 cut(s) | 1113, 2499 |
| BisI | GCNGC | 7 cut(s) | 72, 75, 651, 900, 3315, 3418, 3503 |
| BlnI | CCTAGG | 3 cut(s) | 376, 1378, 1969 |
| BlpI | GCTNAGC | 1 cut(s) | 2446 |
| BlsI | GCNGC | 7 cut(s) | 73, 76, 652, 901, 3316, 3419, 3504 |
| Bme18I | GGWCC | 7 cut(s) | 12, 955, 1267, 2553, 3189, 3436, 4170 |
| BmeT110I | CYCGRG | 3 cut(s) | 403, 4217, 4594 |
| BmgBI | CACGTC | 3 cut(s) | 1597, 2044, 4786 |
| BmrI | ACTGGG | 2 cut(s) | 1043, 1985 |
| BmuI | ACTGGG | 2 cut(s) | 1043, 1985 |
| BpiI | GAAGAC | 7 cut(s) | 222, 924, 2534, 3471, 4229, 4508, 4685 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 481, 513, 2885, 2917 |
| BpmI | CTGGAG | 6 cut(s) | 99, 333, 1856, 2033, 2253, 4751 |
| Bpu10I | CCTNAGC | 3 cut(s) | 996, 1947, 2847 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2446 |
| BpuMI | CCSGG | 3 cut(s) | 438, 4595, 4596 |
| BsaAI | YACGTR | 3 cut(s) | 1510, 2112, 4100 |
| BsaBI | GATNNNNATC | 1 cut(s) | 361 |
| BsaHI | GRCGYC | 3 cut(s) | 1561, 2142, 2170 |
| BsaI | GGTCTC | 4 cut(s) | 441, 484, 1976, 2269 |
| BsaWI | WCCGGW | 4 cut(s) | 1879, 2121, 2376, 3076 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2858, 2888 |
| Bse1I | ACTGG | 8 cut(s) | 1049, 1839, 1991, 2270, 2356, 3865, 4173, 4355 |
| Bse21I | CCTNAGG | 1 cut(s) | 549 |
| Bse3DI | GCAATG | 2 cut(s) | 285, 1749 |
| Bse8I | GATNNNNATC | 1 cut(s) | 361 |
| BseAI | TCCGGA | 1 cut(s) | 3076 |
| BseJI | GATNNNNATC | 1 cut(s) | 361 |
| BseMI | GCAATG | 2 cut(s) | 285, 1749 |
| BseMII | CTCAG | 7 cut(s) | 457, 533, 563, 987, 1938, 2646, 3690 |
| BseNI | ACTGG | 8 cut(s) | 1049, 1839, 1991, 2270, 2356, 3865, 4173, 4355 |
| BseRI | GAGGAG | 5 cut(s) | 285, 288, 1790, 2333, 4469 |
| BseSI | GKGCMC | 7 cut(s) | 318, 2286, 2337, 2977, 3531, 3950, 4235 |
| BseXI | GCAGC | 6 cut(s) | 58, 61, 637, 3326, 3429, 3514 |
| BseYI | CCCAGC | 3 cut(s) | 336, 958, 3204 |
| BsgI | GTGCAG | 1 cut(s) | 1493 |
| Bsh1236I | CGCG | 3 cut(s) | 858, 1724, 1964 |
| BsiHKAI | GWGCWC | 4 cut(s) | 305, 828, 4371, 4746 |
| BsiHKCI | CYCGRG | 3 cut(s) | 403, 4217, 4594 |
| BsiSI | CCGG | 7 cut(s) | 437, 769, 1880, 2122, 2377, 3077, 4595 |
| BslFI | GGGAC | 9 cut(s) | 318, 569, 628, 1360, 1548, 1621, 2566, 3674, 4183 |
| BsmAI | GTCTC | 7 cut(s) | 252, 441, 484, 1976, 2269, 4320, 4718 |
| BsmBI | CGTCTC | 1 cut(s) | 4718 |
| BsmFI | GGGAC | 9 cut(s) | 318, 569, 628, 1360, 1548, 1621, 2566, 3674, 4183 |
| BsmI | GAATGC | 2 cut(s) | 619, 2392 |
| Bso31I | GGTCTC | 4 cut(s) | 441, 484, 1976, 2269 |
| BsoBI | CYCGRG | 3 cut(s) | 403, 4217, 4594 |
| Bsp120I | GGGCCC | 2 cut(s) | 3946, 4231 |
| Bsp13I | TCCGGA | 1 cut(s) | 3076 |
| Bsp1407I | TGTACA | 1 cut(s) | 1599 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2446 |
| Bsp19I | CCATGG | 1 cut(s) | 1617 |
| BspCNI | CTCAG | 7 cut(s) | 456, 532, 562, 988, 1939, 2645, 3691 |
| BspEI | TCCGGA | 1 cut(s) | 3076 |
| BspFNI | CGCG | 3 cut(s) | 858, 1724, 1964 |
| BspMI | ACCTGC | 5 cut(s) | 112, 1065, 1465, 1717, 4046 |
| BspPI | GGATC | 9 cut(s) | 78, 91, 2105, 2119, 2132, 2412, 2526, 3377, 4496 |
| BspTI | CTTAAG | 2 cut(s) | 1394, 4583 |
| BspTNI | GGTCTC | 4 cut(s) | 441, 484, 1976, 2269 |
| BsrDI | GCAATG | 2 cut(s) | 285, 1749 |
| BsrGI | TGTACA | 1 cut(s) | 1599 |
| BsrI | ACTGG | 8 cut(s) | 1049, 1839, 1991, 2270, 2356, 3865, 4173, 4355 |
| BssNI | GRCGYC | 3 cut(s) | 1561, 2142, 2170 |
| BssSI | CACGAG | 1 cut(s) | 2513 |
| BssT1I | CCWWGG | 9 cut(s) | 114, 376, 815, 1378, 1617, 1814, 1969, 2952, 4734 |
| Bst2BI | CACGAG | 1 cut(s) | 2513 |
| Bst4CI | ACNGT | 7 cut(s) | 636, 805, 1825, 2305, 2887, 4139, 4228 |
| Bst6I | CTCTTC | 1 cut(s) | 4749 |
| BstACI | GRCGYC | 3 cut(s) | 1561, 2142, 2170 |
| BstAFI | CTTAAG | 2 cut(s) | 1394, 4583 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2281 |
| BstAUI | TGTACA | 1 cut(s) | 1599 |
| BstBAI | YACGTR | 3 cut(s) | 1510, 2112, 4100 |
| BstC8I | GCNNGC | 6 cut(s) | 342, 828, 2452, 2573, 4345, 4420 |
| BstDSI | CCRYGG | 2 cut(s) | 1617, 3054 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1570, 1775, 4769 |
| BstFNI | CGCG | 3 cut(s) | 858, 1724, 1964 |
| BstH2I | RGCGCY | 3 cut(s) | 526, 2145, 2446 |
| BstHHI | GCGC | 7 cut(s) | 139, 525, 858, 1726, 2144, 2445, 2571 |
| BstMAI | GTCTC | 7 cut(s) | 252, 441, 484, 1976, 2269, 4320, 4718 |
| BstNSI | RCATGY | 5 cut(s) | 1150, 2544, 2575, 2995, 4347 |
| BstSFI | CTRYAG | 5 cut(s) | 3243, 3479, 4282, 4436, 4659 |
| BstSLI | GKGCMC | 7 cut(s) | 318, 2286, 2337, 2977, 3531, 3950, 4235 |
| BstSNI | TACGTA | 1 cut(s) | 1510 |
| BstUI | CGCG | 3 cut(s) | 858, 1724, 1964 |
| BstV1I | GCAGC | 6 cut(s) | 58, 61, 637, 3326, 3429, 3514 |
| BstV2I | GAAGAC | 7 cut(s) | 222, 924, 2534, 3471, 4229, 4508, 4685 |
| BstX2I | RGATCY | 6 cut(s) | 83, 1113, 2124, 2499, 3369, 4488 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 357, 3860 |
| BstYI | RGATCY | 6 cut(s) | 83, 1113, 2124, 2499, 3369, 4488 |
| Bsu36I | CCTNAGG | 1 cut(s) | 549 |
| BsuI | GTATCC | 2 cut(s) | 4201, 4206 |
| BtgI | CCRYGG | 2 cut(s) | 1617, 3054 |
| BtrI | CACGTC | 3 cut(s) | 1597, 2044, 4786 |
| BveI | ACCTGC | 5 cut(s) | 112, 1065, 1465, 1717, 4046 |
| Cac8I | GCNNGC | 6 cut(s) | 342, 828, 2452, 2573, 4345, 4420 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3698 |
| CfoI | GCGC | 7 cut(s) | 139, 525, 858, 1726, 2144, 2445, 2571 |
| Cfr9I | CCCGGG | 1 cut(s) | 4594 |
| CseI | GACGC | 1 cut(s) | 1550 |
| CsiI | ACCWGGT | 3 cut(s) | 529, 1307, 2596 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 516, 551, 3993, 4028 |
| DinI | GGCGCC | 1 cut(s) | 2143 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2678 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2678 |
| EaeI | YGGCCR | 2 cut(s) | 2911, 4177 |
| Eam1104I | CTCTTC | 1 cut(s) | 4749 |
| EarI | CTCTTC | 1 cut(s) | 4749 |
| EciI | GGCGGA | 2 cut(s) | 2169, 3449 |
| Eco105I | TACGTA | 1 cut(s) | 1510 |
| Eco130I | CCWWGG | 9 cut(s) | 114, 376, 815, 1378, 1617, 1814, 1969, 2952, 4734 |
| Eco147I | AGGCCT | 4 cut(s) | 547, 4376, 4472, 4511 |
| Eco24I | GRGCYC | 5 cut(s) | 444, 883, 3645, 3950, 4235 |
| Eco31I | GGTCTC | 4 cut(s) | 441, 484, 1976, 2269 |
| Eco32I | GATATC | 2 cut(s) | 2089, 3326 |
| Eco47I | GGWCC | 7 cut(s) | 12, 955, 1267, 2553, 3189, 3436, 4170 |
| Eco47III | AGCGCT | 1 cut(s) | 2444 |
| Eco57I | CTGAAG | 3 cut(s) | 1758, 3365, 4178 |
| Eco72I | CACGTG | 2 cut(s) | 2112, 4100 |
| Eco81I | CCTNAGG | 1 cut(s) | 549 |
| Eco88I | CYCGRG | 3 cut(s) | 403, 4217, 4594 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1570, 1775, 4769 |
| EcoO109I | RGGNCCY | 5 cut(s) | 12, 955, 1267, 1388, 2553 |
| EcoRI | GAATTC | 1 cut(s) | 514 |
| EcoRV | GATATC | 2 cut(s) | 2089, 3326 |
| EcoT14I | CCWWGG | 9 cut(s) | 114, 376, 815, 1378, 1617, 1814, 1969, 2952, 4734 |
| EcoT22I | ATGCAT | 1 cut(s) | 3115 |
| EcoT38I | GRGCYC | 5 cut(s) | 444, 883, 3645, 3950, 4235 |
| EgeI | GGCGCC | 1 cut(s) | 2143 |
| EheI | GGCGCC | 1 cut(s) | 2143 |
| ErhI | CCWWGG | 9 cut(s) | 114, 376, 815, 1378, 1617, 1814, 1969, 2952, 4734 |
| Esp3I | CGTCTC | 1 cut(s) | 4718 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2519, 2551, 2762, 2794 |
| FaqI | GGGAC | 9 cut(s) | 318, 569, 628, 1360, 1548, 1621, 2566, 3674, 4183 |
| FauI | CCCGC | 3 cut(s) | 646, 2443, 4411 |
| FauNDI | CATATG | 2 cut(s) | 2409, 3068 |
| FbaI | TGATCA | 4 cut(s) | 1105, 1995, 2211, 3333 |
| FblI | GTMKAC | 3 cut(s) | 236, 2173, 3088 |
| Fnu4HI | GCNGC | 7 cut(s) | 72, 75, 651, 900, 3315, 3418, 3503 |
| FriOI | GRGCYC | 5 cut(s) | 444, 883, 3645, 3950, 4235 |
| Fsp4HI | GCNGC | 7 cut(s) | 72, 75, 651, 900, 3315, 3418, 3503 |
| GlaI | GCGC | 7 cut(s) | 138, 524, 857, 1725, 2143, 2444, 2570 |
| GluI | GCNGC | 7 cut(s) | 72, 75, 651, 900, 3315, 3418, 3503 |
| GsaI | CCCAGC | 3 cut(s) | 340, 962, 3208 |
| GsuI | CTGGAG | 6 cut(s) | 99, 333, 1856, 2033, 2253, 4751 |
| HaeII | RGCGCY | 3 cut(s) | 526, 2145, 2446 |
| HapII | CCGG | 7 cut(s) | 437, 769, 1880, 2122, 2377, 3077, 4595 |
| HgaI | GACGC | 1 cut(s) | 1550 |
| HhaI | GCGC | 7 cut(s) | 139, 525, 858, 1726, 2144, 2445, 2571 |
| Hin1I | GRCGYC | 3 cut(s) | 1561, 2142, 2170 |
| Hin6I | GCGC | 7 cut(s) | 137, 523, 856, 1724, 2142, 2443, 2569 |
| HinP1I | GCGC | 7 cut(s) | 137, 523, 856, 1724, 2142, 2443, 2569 |
| HincII | GTYRAC | 7 cut(s) | 226, 370, 868, 982, 1821, 3051, 3550 |
| HindII | GTYRAC | 7 cut(s) | 226, 370, 868, 982, 1821, 3051, 3550 |
| HindIII | AAGCTT | 3 cut(s) | 561, 684, 4540 |
| HpaI | GTTAAC | 3 cut(s) | 370, 1821, 3550 |
| HpaII | CCGG | 7 cut(s) | 437, 769, 1880, 2122, 2377, 3077, 4595 |
| Hpy99I | CGWCG | 1 cut(s) | 1598 |
| HpyCH4III | ACNGT | 7 cut(s) | 636, 805, 1825, 2305, 2887, 4139, 4228 |
| Hsp92I | GRCGYC | 3 cut(s) | 1561, 2142, 2170 |
| HspAI | GCGC | 7 cut(s) | 137, 523, 856, 1724, 2142, 2443, 2569 |
| KasI | GGCGCC | 1 cut(s) | 2141 |
| KflI | GGGWCCC | 1 cut(s) | 12 |
| Kpn2I | TCCGGA | 1 cut(s) | 3076 |
| KpnI | GGTACC | 2 cut(s) | 557, 1672 |
| Ksp22I | TGATCA | 4 cut(s) | 1105, 1995, 2211, 3333 |
| KspAI | GTTAAC | 3 cut(s) | 370, 1821, 3550 |
| LmnI | GCTCC | 7 cut(s) | 275, 1201, 2440, 3131, 4251, 4360, 4741 |
| Lsp1109I | GCAGC | 6 cut(s) | 58, 61, 637, 3326, 3429, 3514 |
| MabI | ACCWGGT | 3 cut(s) | 529, 1307, 2596 |
| MflI | RGATCY | 6 cut(s) | 83, 1113, 2124, 2499, 3369, 4488 |
| MlsI | TGGCCA | 2 cut(s) | 2913, 4179 |
| MluI | ACGCGT | 1 cut(s) | 1962 |
| MluNI | TGGCCA | 2 cut(s) | 2913, 4179 |
| Mly113I | GGCGCC | 1 cut(s) | 2142 |
| MlyI | GAGTC | 6 cut(s) | 33, 301, 1603, 2071, 3094, 3704 |
| MmeI | TCCRAC | 5 cut(s) | 1908, 2054, 2418, 3109, 4218 |
| Mox20I | TGGCCA | 2 cut(s) | 2913, 4179 |
| Mph1103I | ATGCAT | 1 cut(s) | 3115 |
| MroI | TCCGGA | 1 cut(s) | 3076 |
| MroXI | GAANNNNTTC | 1 cut(s) | 4691 |
| MscI | TGGCCA | 2 cut(s) | 2913, 4179 |
| MseI | TTAA | 9 cut(s) | 257, 264, 369, 669, 1038, 1395, 1820, 3549, 4584 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2885, 3663 |
| Msp20I | TGGCCA | 2 cut(s) | 2913, 4179 |
| MspCI | CTTAAG | 2 cut(s) | 1394, 4583 |
| MspI | CCGG | 7 cut(s) | 437, 769, 1880, 2122, 2377, 3077, 4595 |
| Mva1269I | GAATGC | 2 cut(s) | 619, 2392 |
| MvnI | CGCG | 3 cut(s) | 858, 1724, 1964 |
| NarI | GGCGCC | 1 cut(s) | 2142 |
| NciI | CCSGG | 3 cut(s) | 438, 4595, 4596 |
| NcoI | CCATGG | 1 cut(s) | 1617 |
| NdeI | CATATG | 2 cut(s) | 2409, 3068 |
| NmuCI | GTSAC | 9 cut(s) | 1301, 2299, 2347, 2354, 2774, 2785, 2864, 3559, 3665 |
| NsiI | ATGCAT | 1 cut(s) | 3115 |
| NspI | RCATGY | 5 cut(s) | 1150, 2544, 2575, 2995, 4347 |
| OliI | CACNNNNGTG | 1 cut(s) | 2885 |
| PaeI | GCATGC | 2 cut(s) | 2575, 4347 |
| PaeR7I | CTCGAG | 1 cut(s) | 4217 |
| PaqCI | CACCTGC | 1 cut(s) | 112 |
| PasI | CCCWGGG | 1 cut(s) | 1271 |
| PceI | AGGCCT | 4 cut(s) | 547, 4376, 4472, 4511 |
| PctI | GAATGC | 2 cut(s) | 619, 2392 |
| PdmI | GAANNNNTTC | 1 cut(s) | 4691 |
| PfeI | GAWTC | 9 cut(s) | 362, 736, 1526, 1715, 2713, 3361, 4040, 4528, 4730 |
| PflFI | GACNNNGTC | 2 cut(s) | 221, 3671 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 754, 2073, 2437, 4261 |
| PfoI | TCCNGGA | 1 cut(s) | 4767 |
| PkrI | GCNGC | 7 cut(s) | 73, 76, 652, 901, 3316, 3419, 3504 |
| PleI | GAGTC | 6 cut(s) | 33, 301, 1603, 2071, 3093, 3703 |
| PluTI | GGCGCC | 1 cut(s) | 2145 |
| PmaCI | CACGTG | 2 cut(s) | 2112, 4100 |
| PmlI | CACGTG | 2 cut(s) | 2112, 4100 |
| PpsI | GAGTC | 6 cut(s) | 33, 301, 1603, 2071, 3093, 3703 |
| Ppu21I | YACGTR | 3 cut(s) | 1510, 2112, 4100 |
| PpuMI | RGGWCCY | 4 cut(s) | 12, 955, 1267, 2553 |
| PsiI | TTATAA | 1 cut(s) | 1362 |
| Psp1406I | AACGTT | 1 cut(s) | 261 |
| Psp5II | RGGWCCY | 4 cut(s) | 12, 955, 1267, 2553 |
| PspCI | CACGTG | 2 cut(s) | 2112, 4100 |
| PspFI | CCCAGC | 3 cut(s) | 336, 958, 3204 |
| PspOMI | GGGCCC | 2 cut(s) | 3946, 4231 |
| PspPPI | RGGWCCY | 4 cut(s) | 12, 955, 1267, 2553 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4591, 4623 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3698 |
| PsuI | RGATCY | 6 cut(s) | 83, 1113, 2124, 2499, 3369, 4488 |
| PsyI | GACNNNGTC | 2 cut(s) | 221, 3671 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2885, 3663 |
| SaqAI | TTAA | 9 cut(s) | 257, 264, 369, 669, 1038, 1395, 1820, 3549, 4584 |
| SatI | GCNGC | 7 cut(s) | 72, 75, 651, 900, 3315, 3418, 3503 |
| SchI | GAGTC | 6 cut(s) | 33, 301, 1603, 2071, 3094, 3704 |
| SexAI | ACCWGGT | 3 cut(s) | 529, 1307, 2596 |
| SfcI | CTRYAG | 5 cut(s) | 3243, 3479, 4282, 4436, 4659 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 899 |
| SfoI | GGCGCC | 1 cut(s) | 2143 |
| Sfr274I | CTCGAG | 1 cut(s) | 4217 |
| SinI | GGWCC | 7 cut(s) | 12, 955, 1267, 2553, 3189, 3436, 4170 |
| SlaI | CTCGAG | 1 cut(s) | 4217 |
| SmaI | CCCGGG | 1 cut(s) | 4596 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2885, 3663 |
| SnaBI | TACGTA | 1 cut(s) | 1510 |
| SpeI | ACTAGT | 1 cut(s) | 862 |
| SphI | GCATGC | 2 cut(s) | 2575, 4347 |
| SseBI | AGGCCT | 4 cut(s) | 547, 4376, 4472, 4511 |
| SspDI | GGCGCC | 1 cut(s) | 2141 |
| SspI | AATATT | 1 cut(s) | 2650 |
| StuI | AGGCCT | 4 cut(s) | 547, 4376, 4472, 4511 |
| StyI | CCWWGG | 9 cut(s) | 114, 376, 815, 1378, 1617, 1814, 1969, 2952, 4734 |
| TaaI | ACNGT | 7 cut(s) | 636, 805, 1825, 2305, 2887, 4139, 4228 |
| TaqI | TCGA | 7 cut(s) | 305, 1158, 1593, 2370, 3096, 3364, 4218 |
| TatI | WGTACW | 1 cut(s) | 1599 |
| TauI | GCSGC | 1 cut(s) | 902 |
| TfiI | GAWTC | 9 cut(s) | 362, 736, 1526, 1715, 2713, 3361, 4040, 4528, 4730 |
| Tru1I | TTAA | 9 cut(s) | 257, 264, 369, 669, 1038, 1395, 1820, 3549, 4584 |
| Tru9I | TTAA | 9 cut(s) | 257, 264, 369, 669, 1038, 1395, 1820, 3549, 4584 |
| TseFI | GTSAC | 9 cut(s) | 1301, 2299, 2347, 2354, 2774, 2785, 2864, 3559, 3665 |
| TseI | GCWGC | 6 cut(s) | 71, 74, 650, 3314, 3417, 3502 |
| Tsp45I | GTSAC | 9 cut(s) | 1301, 2299, 2347, 2354, 2774, 2785, 2864, 3559, 3665 |
| TspGWI | ACGGA | 4 cut(s) | 193, 2493, 3871, 4350 |
| TspMI | CCCGGG | 1 cut(s) | 4594 |
| Tth111I | GACNNNGTC | 2 cut(s) | 221, 3671 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 754, 2073, 2437, 4261 |
| Vha464I | CTTAAG | 2 cut(s) | 1394, 4583 |
| VpaK11BI | GGWCC | 7 cut(s) | 12, 955, 1267, 2553, 3189, 3436, 4170 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1570, 1775, 4769 |
| XapI | RAATTY | 2 cut(s) | 514, 3915 |
| XbaI | TCTAGA | 1 cut(s) | 4577 |
| XceI | RCATGY | 5 cut(s) | 1150, 2544, 2575, 2995, 4347 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2191 |
| XhoI | CTCGAG | 1 cut(s) | 4217 |
| XmaI | CCCGGG | 1 cut(s) | 4594 |
| XmaJI | CCTAGG | 3 cut(s) | 376, 1378, 1969 |
| XmiI | GTMKAC | 3 cut(s) | 236, 2173, 3088 |
| XmnI | GAANNNNTTC | 1 cut(s) | 4691 |
| ZraI | GACGTC | 1 cut(s) | 2171 |
| Zsp2I | ATGCAT | 1 cut(s) | 3115 |