protein kinase activity
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2106 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2583 |
| Acc36I | ACCTGC | 4 cut(s) | 265, 1273, 2522, 2535 |
| AccB1I | GGYRCC | 1 cut(s) | 2910 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1686, 2395 |
| AccBSI | CCGCTC | 1 cut(s) | 2514 |
| AccII | CGCG | 2 cut(s) | 331, 935 |
| AccIII | TCCGGA | 4 cut(s) | 779, 900, 2800, 3297 |
| AclI | AACGTT | 1 cut(s) | 2347 |
| AclWI | GGATC | 9 cut(s) | 51, 1070, 1083, 1645, 1745, 2025, 2139, 3255, 3268 |
| AcoI | YGGCCR | 3 cut(s) | 600, 1372, 3352 |
| AcsI | RAATTY | 4 cut(s) | 784, 1436, 3387, 3833 |
| AcuI | CTGAAG | 1 cut(s) | 822 |
| AcvI | CACGTG | 1 cut(s) | 1955 |
| AcyI | GRCGYC | 1 cut(s) | 2724 |
| AfaI | GTAC | 4 cut(s) | 1044, 2400, 2751, 3903 |
| AflII | CTTAAG | 2 cut(s) | 1826, 3203 |
| AflIII | ACRYGT | 4 cut(s) | 94, 1952, 1954, 2856 |
| AgeI | ACCGGT | 1 cut(s) | 3529 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3701 |
| AhlI | ACTAGT | 1 cut(s) | 154 |
| AjnI | CCWGG | 3 cut(s) | 1078, 1115, 3736 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 872, 904 |
| AleI | CACNNNNGTG | 1 cut(s) | 1066 |
| Alw21I | GWGCWC | 2 cut(s) | 876, 2821 |
| Alw26I | GTCTC | 6 cut(s) | 93, 1039, 1589, 3427, 3495, 3866 |
| AlwI | GGATC | 9 cut(s) | 51, 1070, 1083, 1645, 1745, 2025, 2139, 3255, 3268 |
| Ama87I | CYCGRG | 4 cut(s) | 9, 875, 1767, 2814 |
| Aor13HI | TCCGGA | 4 cut(s) | 779, 900, 2800, 3297 |
| AoxI | GGCC | 8 cut(s) | 424, 600, 1128, 1372, 2419, 2939, 3352, 3406 |
| ApeKI | GCWGC | 6 cut(s) | 224, 1492, 1616, 2636, 2758, 3590 |
| ApoI | RAATTY | 4 cut(s) | 784, 1436, 3387, 3833 |
| AsiGI | ACCGGT | 1 cut(s) | 3529 |
| AsuC2I | CCSGG | 1 cut(s) | 599 |
| AsuHPI | GGTGA | 7 cut(s) | 159, 1081, 1208, 1420, 1924, 3608, 3853 |
| AvaI | CYCGRG | 4 cut(s) | 9, 875, 1767, 2814 |
| AvaII | GGWCC | 6 cut(s) | 907, 1822, 2166, 2509, 3086, 3764 |
| AxyI | CCTNAGG | 1 cut(s) | 2127 |
| BaeGI | GKGCMC | 1 cut(s) | 2915 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1200, 1233 |
| BalI | TGGCCA | 1 cut(s) | 3354 |
| BamHI | GGATCC | 2 cut(s) | 1075, 3260 |
| BanI | GGYRCC | 1 cut(s) | 2910 |
| BanII | GRGCYC | 2 cut(s) | 876, 3014 |
| BauI | CACGAG | 1 cut(s) | 3627 |
| BbrPI | CACGTG | 1 cut(s) | 1955 |
| BbsI | GAAGAC | 2 cut(s) | 2693, 3404 |
| Bbv12I | GWGCWC | 2 cut(s) | 876, 2821 |
| BbvI | GCAGC | 6 cut(s) | 236, 1504, 1603, 2623, 2770, 3602 |
| BccI | CCATC | 8 cut(s) | 172, 1436, 1495, 1795, 2084, 2684, 2921, 3248 |
| BceAI | ACGGC | 1 cut(s) | 1644 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 658, 692 |
| BciT130I | CCWGG | 3 cut(s) | 1080, 1117, 3738 |
| BciVI | GTATCC | 1 cut(s) | 1494 |
| BclI | TGATCA | 1 cut(s) | 2893 |
| BcnI | CCSGG | 1 cut(s) | 599 |
| BcoDI | GTCTC | 6 cut(s) | 93, 1039, 1589, 3427, 3495, 3866 |
| BcuI | ACTAGT | 1 cut(s) | 154 |
| BfmI | CTRYAG | 1 cut(s) | 2118 |
| BfrI | CTTAAG | 2 cut(s) | 1826, 3203 |
| BfuAI | ACCTGC | 4 cut(s) | 265, 1273, 2522, 2535 |
| BfuI | GTATCC | 1 cut(s) | 1494 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2194 |
| BglII | AGATCT | 1 cut(s) | 1138 |
| BisI | GCNGC | 8 cut(s) | 225, 329, 332, 1493, 1617, 2637, 2759, 3591 |
| BlsI | GCNGC | 8 cut(s) | 226, 330, 333, 1494, 1618, 2638, 2760, 3592 |
| Bme1390I | CCNGG | 4 cut(s) | 599, 1080, 1117, 3738 |
| Bme18I | GGWCC | 6 cut(s) | 907, 1822, 2166, 2509, 3086, 3764 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3701 |
| BmeT110I | CYCGRG | 4 cut(s) | 9, 875, 1767, 2814 |
| BmrFI | CCNGG | 4 cut(s) | 599, 1080, 1117, 3738 |
| BmrI | ACTGGG | 1 cut(s) | 1974 |
| BmuI | ACTGGG | 1 cut(s) | 1974 |
| BpiI | GAAGAC | 2 cut(s) | 2693, 3404 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1019, 1051, 1378, 1410, 2498, 2530 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1661 |
| BpuEI | CTTGAG | 3 cut(s) | 410, 3451, 3842 |
| BpuMI | CCSGG | 1 cut(s) | 599 |
| Bsa29I | ATCGAT | 7 cut(s) | 616, 637, 678, 699, 729, 750, 3585 |
| BsaAI | YACGTR | 2 cut(s) | 1955, 2857 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2961 |
| BsaHI | GRCGYC | 1 cut(s) | 2724 |
| BsaJI | CCNNGG | 6 cut(s) | 329, 539, 789, 1079, 1431, 3236 |
| BsaWI | WCCGGW | 6 cut(s) | 779, 900, 2689, 2800, 3297, 3529 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 228, 258, 1963, 1993 |
| Bse118I | RCCGGY | 4 cut(s) | 440, 1603, 2063, 3529 |
| Bse1I | ACTGG | 2 cut(s) | 809, 1969 |
| Bse21I | CCTNAGG | 1 cut(s) | 2127 |
| Bse3DI | GCAATG | 3 cut(s) | 1482, 1598, 3613 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2961 |
| BseAI | TCCGGA | 4 cut(s) | 779, 900, 2800, 3297 |
| BseBI | CCWGG | 3 cut(s) | 1080, 1117, 3738 |
| BseCI | ATCGAT | 7 cut(s) | 616, 637, 678, 699, 729, 750, 3585 |
| BseDI | CCNNGG | 6 cut(s) | 329, 539, 789, 1079, 1431, 3236 |
| BseJI | GATNNNNATC | 1 cut(s) | 2961 |
| BseMI | GCAATG | 3 cut(s) | 1482, 1598, 3613 |
| BseMII | CTCAG | 5 cut(s) | 1050, 2118, 2304, 2742, 3918 |
| BseNI | ACTGG | 2 cut(s) | 809, 1969 |
| BseRI | GAGGAG | 6 cut(s) | 249, 884, 1272, 1350, 1652, 3896 |
| BseSI | GKGCMC | 1 cut(s) | 2915 |
| BseXI | GCAGC | 6 cut(s) | 236, 1504, 1603, 2623, 2770, 3602 |
| BsgI | GTGCAG | 2 cut(s) | 1301, 3819 |
| Bsh1236I | CGCG | 2 cut(s) | 331, 935 |
| BshFI | GGCC | 8 cut(s) | 426, 602, 1130, 1374, 2421, 2941, 3354, 3408 |
| BshNI | GGYRCC | 1 cut(s) | 2910 |
| BshTI | ACCGGT | 1 cut(s) | 3529 |
| BshVI | ATCGAT | 7 cut(s) | 616, 637, 678, 699, 729, 750, 3585 |
| BsiHKAI | GWGCWC | 2 cut(s) | 876, 2821 |
| BsiHKCI | CYCGRG | 4 cut(s) | 9, 875, 1767, 2814 |
| BslFI | GGGAC | 3 cut(s) | 581, 2179, 3099 |
| BsmAI | GTCTC | 6 cut(s) | 93, 1039, 1589, 3427, 3495, 3866 |
| BsmBI | CGTCTC | 2 cut(s) | 93, 3866 |
| BsmFI | GGGAC | 3 cut(s) | 581, 2179, 3099 |
| BsmI | GAATGC | 2 cut(s) | 496, 2639 |
| BsnI | GGCC | 8 cut(s) | 426, 602, 1130, 1374, 2421, 2941, 3354, 3408 |
| BsoBI | CYCGRG | 4 cut(s) | 9, 875, 1767, 2814 |
| Bsp1286I | GDGCHC | 4 cut(s) | 876, 2821, 2915, 3014 |
| Bsp13I | TCCGGA | 4 cut(s) | 779, 900, 2800, 3297 |
| Bsp19I | CCATGG | 1 cut(s) | 1431 |
| BspANI | GGCC | 8 cut(s) | 426, 602, 1130, 1374, 2421, 2941, 3354, 3408 |
| BspCNI | CTCAG | 5 cut(s) | 1049, 2119, 2303, 2741, 3919 |
| BspDI | ATCGAT | 7 cut(s) | 616, 637, 678, 699, 729, 750, 3585 |
| BspEI | TCCGGA | 4 cut(s) | 779, 900, 2800, 3297 |
| BspFNI | CGCG | 2 cut(s) | 331, 935 |
| BspHI | TCATGA | 2 cut(s) | 1383, 2917 |
| BspMI | ACCTGC | 4 cut(s) | 265, 1273, 2522, 2535 |
| BspPI | GGATC | 9 cut(s) | 51, 1070, 1083, 1645, 1745, 2025, 2139, 3255, 3268 |
| BspT107I | GGYRCC | 1 cut(s) | 2910 |
| BspTI | CTTAAG | 2 cut(s) | 1826, 3203 |
| BsrBI | CCGCTC | 1 cut(s) | 2514 |
| BsrDI | GCAATG | 3 cut(s) | 1482, 1598, 3613 |
| BsrFI | RCCGGY | 4 cut(s) | 440, 1603, 2063, 3529 |
| BsrI | ACTGG | 2 cut(s) | 809, 1969 |
| BssAI | RCCGGY | 4 cut(s) | 440, 1603, 2063, 3529 |
| BssECI | CCNNGG | 6 cut(s) | 329, 539, 789, 1079, 1431, 3236 |
| BssNI | GRCGYC | 1 cut(s) | 2724 |
| BssSI | CACGAG | 1 cut(s) | 3627 |
| BssT1I | CCWWGG | 4 cut(s) | 539, 789, 1431, 3236 |
| Bst2BI | CACGAG | 1 cut(s) | 3627 |
| Bst2UI | CCWGG | 3 cut(s) | 1080, 1117, 3738 |
| Bst4CI | ACNGT | 6 cut(s) | 463, 1015, 1238, 1918, 2580, 3403 |
| Bst6I | CTCTTC | 1 cut(s) | 2619 |
| BstACI | GRCGYC | 1 cut(s) | 2724 |
| BstAFI | CTTAAG | 2 cut(s) | 1826, 3203 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2979 |
| BstBAI | YACGTR | 2 cut(s) | 1955, 2857 |
| BstC8I | GCNNGC | 5 cut(s) | 424, 1396, 1730, 1994, 2591 |
| BstDSI | CCRYGG | 2 cut(s) | 329, 1431 |
| BstEII | GGTNACC | 1 cut(s) | 793 |
| BstFNI | CGCG | 2 cut(s) | 331, 935 |
| BstMAI | GTCTC | 6 cut(s) | 93, 1039, 1589, 3427, 3495, 3866 |
| BstNI | CCWGG | 3 cut(s) | 1080, 1117, 3738 |
| BstNSI | RCATGY | 4 cut(s) | 272, 1728, 1732, 2319 |
| BstPI | GGTNACC | 1 cut(s) | 793 |
| BstSCI | CCNGG | 4 cut(s) | 597, 1078, 1115, 3736 |
| BstSFI | CTRYAG | 1 cut(s) | 2118 |
| BstSLI | GKGCMC | 1 cut(s) | 2915 |
| BstUI | CGCG | 2 cut(s) | 331, 935 |
| BstV1I | GCAGC | 6 cut(s) | 236, 1504, 1603, 2623, 2770, 3602 |
| BstV2I | GAAGAC | 2 cut(s) | 2693, 3404 |
| BstX2I | RGATCY | 4 cut(s) | 1075, 1138, 1737, 3260 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2694 |
| BstYI | RGATCY | 4 cut(s) | 1075, 1138, 1737, 3260 |
| Bsu15I | ATCGAT | 7 cut(s) | 616, 637, 678, 699, 729, 750, 3585 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2127 |
| BsuI | GTATCC | 1 cut(s) | 1494 |
| BsuRI | GGCC | 8 cut(s) | 426, 602, 1130, 1374, 2421, 2941, 3354, 3408 |
| BsuTUI | ATCGAT | 7 cut(s) | 616, 637, 678, 699, 729, 750, 3585 |
| BtgI | CCRYGG | 2 cut(s) | 329, 1431 |
| BtgZI | GCGATG | 1 cut(s) | 1473 |
| BtsI | GCAGTG | 2 cut(s) | 1638, 3807 |
| BtsIMutI | CAGTG | 4 cut(s) | 1030, 1638, 3256, 3807 |
| BveI | ACCTGC | 4 cut(s) | 265, 1273, 2522, 2535 |
| Cac8I | GCNNGC | 5 cut(s) | 424, 1396, 1730, 1994, 2591 |
| CciI | TCATGA | 2 cut(s) | 1383, 2917 |
| Cfr10I | RCCGGY | 4 cut(s) | 440, 1603, 2063, 3529 |
| Cfr42I | CCGCGG | 1 cut(s) | 332 |
| ClaI | ATCGAT | 7 cut(s) | 616, 637, 678, 699, 729, 750, 3585 |
| CseI | GACGC | 4 cut(s) | 75, 383, 941, 2732 |
| CsiI | ACCWGGT | 1 cut(s) | 1115 |
| Csp6I | GTAC | 4 cut(s) | 1043, 2399, 2750, 3902 |
| CspAI | ACCGGT | 1 cut(s) | 3529 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1949, 1984, 2840, 2875 |
| CviQI | GTAC | 4 cut(s) | 1043, 2399, 2750, 3902 |
| DraI | TTTAAA | 1 cut(s) | 2343 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2583 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3701 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2583 |
| EaeI | YGGCCR | 3 cut(s) | 600, 1372, 3352 |
| Eam1104I | CTCTTC | 1 cut(s) | 2619 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3701 |
| EarI | CTCTTC | 1 cut(s) | 2619 |
| Ecl136II | GAGCTC | 1 cut(s) | 874 |
| Eco130I | CCWWGG | 4 cut(s) | 539, 789, 1431, 3236 |
| Eco24I | GRGCYC | 2 cut(s) | 876, 3014 |
| Eco47I | GGWCC | 6 cut(s) | 907, 1822, 2166, 2509, 3086, 3764 |
| Eco53kI | GAGCTC | 1 cut(s) | 874 |
| Eco57I | CTGAAG | 1 cut(s) | 822 |
| Eco72I | CACGTG | 1 cut(s) | 1955 |
| Eco81I | CCTNAGG | 1 cut(s) | 2127 |
| Eco88I | CYCGRG | 4 cut(s) | 9, 875, 1767, 2814 |
| Eco91I | GGTNACC | 1 cut(s) | 793 |
| EcoICRI | GAGCTC | 1 cut(s) | 874 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1822, 2166 |
| EcoO65I | GGTNACC | 1 cut(s) | 793 |
| EcoRII | CCWGG | 3 cut(s) | 1078, 1115, 3736 |
| EcoT14I | CCWWGG | 4 cut(s) | 539, 789, 1431, 3236 |
| EcoT22I | ATGCAT | 6 cut(s) | 1183, 1525, 1730, 1734, 2231, 2317 |
| EcoT38I | GRGCYC | 2 cut(s) | 876, 3014 |
| ErhI | CCWWGG | 4 cut(s) | 539, 789, 1431, 3236 |
| Esp3I | CGTCTC | 2 cut(s) | 93, 3866 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2132, 2164, 2646, 2678 |
| FaqI | GGGAC | 3 cut(s) | 581, 2179, 3099 |
| FauI | CCCGC | 2 cut(s) | 415, 1726 |
| FbaI | TGATCA | 1 cut(s) | 2893 |
| Fnu4HI | GCNGC | 8 cut(s) | 225, 329, 332, 1493, 1617, 2637, 2759, 3591 |
| FriOI | GRGCYC | 2 cut(s) | 876, 3014 |
| Fsp4HI | GCNGC | 8 cut(s) | 225, 329, 332, 1493, 1617, 2637, 2759, 3591 |
| GluI | GCNGC | 8 cut(s) | 225, 329, 332, 1493, 1617, 2637, 2759, 3591 |
| HaeIII | GGCC | 8 cut(s) | 426, 602, 1130, 1374, 2421, 2941, 3354, 3408 |
| HgaI | GACGC | 4 cut(s) | 75, 383, 941, 2732 |
| Hin1I | GRCGYC | 1 cut(s) | 2724 |
| HincII | GTYRAC | 1 cut(s) | 2993 |
| HindII | GTYRAC | 1 cut(s) | 2993 |
| HindIII | AAGCTT | 2 cut(s) | 1055, 1994 |
| HphI | GGTGA | 7 cut(s) | 159, 1081, 1208, 1420, 1924, 3608, 3853 |
| Hpy166II | GTNNAC | 5 cut(s) | 247, 469, 916, 2993, 3634 |
| Hpy8I | GTNNAC | 5 cut(s) | 247, 469, 916, 2993, 3634 |
| Hpy99I | CGWCG | 2 cut(s) | 1019, 2184 |
| HpyCH4III | ACNGT | 6 cut(s) | 463, 1015, 1238, 1918, 2580, 3403 |
| Hsp92I | GRCGYC | 1 cut(s) | 2724 |
| Kpn2I | TCCGGA | 4 cut(s) | 779, 900, 2800, 3297 |
| Ksp22I | TGATCA | 1 cut(s) | 2893 |
| KspI | CCGCGG | 1 cut(s) | 332 |
| Lsp1109I | GCAGC | 6 cut(s) | 236, 1504, 1603, 2623, 2770, 3602 |
| MabI | ACCWGGT | 1 cut(s) | 1115 |
| MbiI | CCGCTC | 1 cut(s) | 2514 |
| MfeI | CAATTG | 3 cut(s) | 1226, 2897, 3480 |
| MflI | RGATCY | 4 cut(s) | 1075, 1138, 1737, 3260 |
| MhlI | GDGCHC | 4 cut(s) | 876, 2821, 2915, 3014 |
| MlsI | TGGCCA | 1 cut(s) | 3354 |
| MluNI | TGGCCA | 1 cut(s) | 3354 |
| MlyI | GAGTC | 4 cut(s) | 2707, 2806, 3849, 3913 |
| MmeI | TCCRAC | 2 cut(s) | 318, 1667 |
| Mox20I | TGGCCA | 1 cut(s) | 3354 |
| Mph1103I | ATGCAT | 6 cut(s) | 1183, 1525, 1730, 1734, 2231, 2317 |
| MroI | TCCGGA | 4 cut(s) | 779, 900, 2800, 3297 |
| MscI | TGGCCA | 1 cut(s) | 3354 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1066, 1727 |
| Msp20I | TGGCCA | 1 cut(s) | 3354 |
| MspA1I | CMGCKG | 4 cut(s) | 331, 689, 1040, 3593 |
| MspCI | CTTAAG | 2 cut(s) | 1826, 3203 |
| MspR9I | CCNGG | 4 cut(s) | 599, 1080, 1117, 3738 |
| MunI | CAATTG | 3 cut(s) | 1226, 2897, 3480 |
| Mva1269I | GAATGC | 2 cut(s) | 496, 2639 |
| MvaI | CCWGG | 3 cut(s) | 1080, 1117, 3738 |
| MvnI | CGCG | 2 cut(s) | 331, 935 |
| NciI | CCSGG | 1 cut(s) | 599 |
| NcoI | CCATGG | 1 cut(s) | 1431 |
| NmuCI | GTSAC | 5 cut(s) | 69, 400, 659, 1912, 2720 |
| NsiI | ATGCAT | 6 cut(s) | 1183, 1525, 1730, 1734, 2231, 2317 |
| NspI | RCATGY | 4 cut(s) | 272, 1728, 1732, 2319 |
| OliI | CACNNNNGTG | 1 cut(s) | 1066 |
| PaeI | GCATGC | 1 cut(s) | 1732 |
| PaeR7I | CTCGAG | 3 cut(s) | 875, 1767, 2814 |
| PagI | TCATGA | 2 cut(s) | 1383, 2917 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2992 |
| PctI | GAATGC | 2 cut(s) | 496, 2639 |
| PfeI | GAWTC | 9 cut(s) | 119, 385, 1945, 2303, 2797, 2921, 2931, 2957, 3179 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1686, 2395 |
| PinAI | ACCGGT | 1 cut(s) | 3529 |
| PkrI | GCNGC | 8 cut(s) | 226, 330, 333, 1494, 1618, 2638, 2760, 3592 |
| PleI | GAGTC | 4 cut(s) | 2706, 2806, 3849, 3913 |
| PmaCI | CACGTG | 1 cut(s) | 1955 |
| PmlI | CACGTG | 1 cut(s) | 1955 |
| PpsI | GAGTC | 4 cut(s) | 2706, 2806, 3849, 3913 |
| Ppu21I | YACGTR | 2 cut(s) | 1955, 2857 |
| PpuMI | RGGWCCY | 2 cut(s) | 1822, 2166 |
| PsiI | TTATAA | 1 cut(s) | 2106 |
| Psp124BI | GAGCTC | 1 cut(s) | 876 |
| Psp1406I | AACGTT | 1 cut(s) | 2347 |
| Psp5II | RGGWCCY | 2 cut(s) | 1822, 2166 |
| Psp6I | CCWGG | 3 cut(s) | 1078, 1115, 3736 |
| PspCI | CACGTG | 1 cut(s) | 1955 |
| PspEI | GGTNACC | 1 cut(s) | 793 |
| PspGI | CCWGG | 3 cut(s) | 1078, 1115, 3736 |
| PspPPI | RGGWCCY | 2 cut(s) | 1822, 2166 |
| PspXI | VCTCGAGB | 1 cut(s) | 2814 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3733, 3765 |
| PsuI | RGATCY | 4 cut(s) | 1075, 1138, 1737, 3260 |
| PvuII | CAGCTG | 2 cut(s) | 689, 3593 |
| RsaI | GTAC | 4 cut(s) | 1044, 2400, 2751, 3903 |
| RsaNI | GTAC | 4 cut(s) | 1043, 2399, 2750, 3902 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1066, 1727 |
| SacI | GAGCTC | 1 cut(s) | 876 |
| SacII | CCGCGG | 1 cut(s) | 332 |
| SatI | GCNGC | 8 cut(s) | 225, 329, 332, 1493, 1617, 2637, 2759, 3591 |
| SchI | GAGTC | 4 cut(s) | 2707, 2806, 3849, 3913 |
| ScrFI | CCNGG | 4 cut(s) | 599, 1080, 1117, 3738 |
| SduI | GDGCHC | 4 cut(s) | 876, 2821, 2915, 3014 |
| SexAI | ACCWGGT | 1 cut(s) | 1115 |
| SfcI | CTRYAG | 1 cut(s) | 2118 |
| Sfr274I | CTCGAG | 3 cut(s) | 875, 1767, 2814 |
| Sfr303I | CCGCGG | 1 cut(s) | 332 |
| SgrBI | CCGCGG | 1 cut(s) | 332 |
| SinI | GGWCC | 6 cut(s) | 907, 1822, 2166, 2509, 3086, 3764 |
| SlaI | CTCGAG | 3 cut(s) | 875, 1767, 2814 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1066, 1727 |
| SmlI | CTYRAG | 8 cut(s) | 389, 875, 1767, 1826, 2814, 3203, 3430, 3857 |
| SmoI | CTYRAG | 8 cut(s) | 389, 875, 1767, 1826, 2814, 3203, 3430, 3857 |
| SpeI | ACTAGT | 1 cut(s) | 154 |
| SphI | GCATGC | 1 cut(s) | 1732 |
| SstI | GAGCTC | 1 cut(s) | 876 |
| StyD4I | CCNGG | 4 cut(s) | 597, 1078, 1115, 3736 |
| StyI | CCWWGG | 4 cut(s) | 539, 789, 1431, 3236 |
| TaaI | ACNGT | 6 cut(s) | 463, 1015, 1238, 1918, 2580, 3403 |
| TatI | WGTACW | 1 cut(s) | 2749 |
| TauI | GCSGC | 2 cut(s) | 331, 334 |
| TfiI | GAWTC | 9 cut(s) | 119, 385, 1945, 2303, 2797, 2921, 2931, 2957, 3179 |
| TscAI | CASTG | 4 cut(s) | 1030, 1638, 3256, 3807 |
| TseFI | GTSAC | 5 cut(s) | 69, 400, 659, 1912, 2720 |
| TseI | GCWGC | 6 cut(s) | 224, 1492, 1616, 2636, 2758, 3590 |
| Tsp45I | GTSAC | 5 cut(s) | 69, 400, 659, 1912, 2720 |
| TspGWI | ACGGA | 3 cut(s) | 131, 383, 1643 |
| TspRI | CASTG | 4 cut(s) | 1030, 1638, 3256, 3807 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1686, 2395 |
| Vha464I | CTTAAG | 2 cut(s) | 1826, 3203 |
| VpaK11BI | GGWCC | 6 cut(s) | 907, 1822, 2166, 2509, 3086, 3764 |
| XapI | RAATTY | 4 cut(s) | 784, 1436, 3387, 3833 |
| XbaI | TCTAGA | 2 cut(s) | 2573, 3014 |
| XceI | RCATGY | 4 cut(s) | 272, 1728, 1732, 2319 |
| XhoI | CTCGAG | 3 cut(s) | 875, 1767, 2814 |
| Zsp2I | ATGCAT | 6 cut(s) | 1183, 1525, 1730, 1734, 2231, 2317 |