transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 685 |
| AccB1I | GGYRCC | 1 cut(s) | 654 |
| AciI | CCGC | 1 cut(s) | 215 |
| AclI | AACGTT | 1 cut(s) | 21 |
| AclWI | GGATC | 1 cut(s) | 225 |
| AcsI | RAATTY | 2 cut(s) | 518, 690 |
| AfaI | GTAC | 1 cut(s) | 373 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 63, 750 |
| AgsI | TTSAA | 8 cut(s) | 107, 389, 416, 436, 446, 499, 707, 730 |
| AjnI | CCWGG | 1 cut(s) | 61 |
| AluBI | AGCT | 6 cut(s) | 113, 169, 362, 449, 554, 668 |
| AluI | AGCT | 6 cut(s) | 113, 169, 362, 449, 554, 668 |
| Alw21I | GWGCWC | 1 cut(s) | 529 |
| Alw26I | GTCTC | 1 cut(s) | 207 |
| AlwI | GGATC | 1 cut(s) | 225 |
| ApoI | RAATTY | 2 cut(s) | 518, 690 |
| AseI | ATTAAT | 1 cut(s) | 489 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 97 |
| AspS9I | GGNCC | 1 cut(s) | 674 |
| AvaII | GGWCC | 1 cut(s) | 674 |
| BanI | GGYRCC | 1 cut(s) | 654 |
| BbsI | GAAGAC | 1 cut(s) | 423 |
| Bbv12I | GWGCWC | 1 cut(s) | 529 |
| BccI | CCATC | 2 cut(s) | 706, 753 |
| BciT130I | CCWGG | 1 cut(s) | 63 |
| BcoDI | GTCTC | 1 cut(s) | 207 |
| BfaI | CTAG | 4 cut(s) | 132, 170, 212, 579 |
| BfmI | CTRYAG | 1 cut(s) | 291 |
| BfuAI | ACCTGC | 1 cut(s) | 685 |
| Bme1390I | CCNGG | 1 cut(s) | 63 |
| Bme18I | GGWCC | 1 cut(s) | 674 |
| BmgT120I | GGNCC | 1 cut(s) | 674 |
| BmiI | GGNNCC | 2 cut(s) | 656, 675 |
| BmrFI | CCNGG | 1 cut(s) | 63 |
| BmsI | GCATC | 2 cut(s) | 135, 466 |
| BpiI | GAAGAC | 1 cut(s) | 423 |
| Bsa29I | ATCGAT | 2 cut(s) | 220, 273 |
| BsaJI | CCNNGG | 2 cut(s) | 62, 236 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 63, 750 |
| Bse118I | RCCGGY | 1 cut(s) | 368 |
| BseBI | CCWGG | 1 cut(s) | 63 |
| BseCI | ATCGAT | 2 cut(s) | 220, 273 |
| BseDI | CCNNGG | 2 cut(s) | 62, 236 |
| BseGI | GGATG | 2 cut(s) | 457, 532 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 63, 750 |
| BseMII | CTCAG | 1 cut(s) | 740 |
| BshNI | GGYRCC | 1 cut(s) | 654 |
| BshVI | ATCGAT | 2 cut(s) | 220, 273 |
| BsiHKAI | GWGCWC | 1 cut(s) | 529 |
| BsiSI | CCGG | 1 cut(s) | 369 |
| BslFI | GGGAC | 1 cut(s) | 687 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 63, 750 |
| BsmAI | GTCTC | 1 cut(s) | 207 |
| BsmFI | GGGAC | 1 cut(s) | 687 |
| Bsp1286I | GDGCHC | 1 cut(s) | 529 |
| Bsp143I | GATC | 5 cut(s) | 121, 217, 221, 270, 274 |
| BspACI | CCGC | 1 cut(s) | 215 |
| BspCNI | CTCAG | 1 cut(s) | 741 |
| BspDI | ATCGAT | 2 cut(s) | 220, 273 |
| BspLI | GGNNCC | 2 cut(s) | 656, 675 |
| BspMI | ACCTGC | 1 cut(s) | 685 |
| BspPI | GGATC | 1 cut(s) | 225 |
| BspT107I | GGYRCC | 1 cut(s) | 654 |
| BsrFI | RCCGGY | 1 cut(s) | 368 |
| BssAI | RCCGGY | 1 cut(s) | 368 |
| BssECI | CCNNGG | 2 cut(s) | 62, 236 |
| BssMI | GATC | 5 cut(s) | 121, 217, 221, 270, 274 |
| Bst2UI | CCWGG | 1 cut(s) | 63 |
| Bst6I | CTCTTC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 2 cut(s) | 358, 749 |
| BstDSI | CCRYGG | 1 cut(s) | 236 |
| BstF5I | GGATG | 2 cut(s) | 457, 532 |
| BstKTI | GATC | 5 cut(s) | 124, 220, 224, 273, 277 |
| BstMAI | GTCTC | 1 cut(s) | 207 |
| BstMBI | GATC | 5 cut(s) | 121, 217, 221, 270, 274 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 406, 652 |
| BstNI | CCWGG | 1 cut(s) | 63 |
| BstSCI | CCNGG | 1 cut(s) | 61 |
| BstSFI | CTRYAG | 1 cut(s) | 291 |
| BstV2I | GAAGAC | 1 cut(s) | 423 |
| Bsu15I | ATCGAT | 2 cut(s) | 220, 273 |
| BsuTUI | ATCGAT | 2 cut(s) | 220, 273 |
| BtgI | CCRYGG | 1 cut(s) | 236 |
| BtsCI | GGATG | 2 cut(s) | 457, 532 |
| BveI | ACCTGC | 1 cut(s) | 685 |
| Cfr10I | RCCGGY | 1 cut(s) | 368 |
| Cfr13I | GGNCC | 1 cut(s) | 674 |
| ClaI | ATCGAT | 2 cut(s) | 220, 273 |
| Csp6I | GTAC | 1 cut(s) | 372 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 33, 68 |
| CviJI | RGCY | 7 cut(s) | 113, 169, 362, 449, 554, 668, 800 |
| CviKI_1 | RGCY | 7 cut(s) | 113, 169, 362, 449, 554, 668, 800 |
| CviQI | GTAC | 1 cut(s) | 372 |
| DdeI | CTNAG | 2 cut(s) | 358, 749 |
| DpnI | GATC | 5 cut(s) | 123, 219, 223, 272, 276 |
| DpnII | GATC | 5 cut(s) | 121, 217, 221, 270, 274 |
| DraI | TTTAAA | 1 cut(s) | 163 |
| Eam1104I | CTCTTC | 1 cut(s) | 6 |
| EarI | CTCTTC | 1 cut(s) | 6 |
| Eco47I | GGWCC | 1 cut(s) | 674 |
| EcoO109I | RGGNCCY | 1 cut(s) | 674 |
| EcoRII | CCWGG | 1 cut(s) | 61 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 710, 742 |
| FaqI | GGGAC | 1 cut(s) | 687 |
| FokI | GGATG | 2 cut(s) | 444, 519 |
| FspBI | CTAG | 4 cut(s) | 132, 170, 212, 579 |
| HapII | CCGG | 1 cut(s) | 369 |
| HincII | GTYRAC | 2 cut(s) | 54, 807 |
| HindII | GTYRAC | 2 cut(s) | 54, 807 |
| HindIII | AAGCTT | 3 cut(s) | 111, 552, 666 |
| HinfI | GANTC | 5 cut(s) | 76, 304, 331, 499, 776 |
| HpaI | GTTAAC | 1 cut(s) | 807 |
| HpaII | CCGG | 1 cut(s) | 369 |
| Hpy166II | GTNNAC | 2 cut(s) | 54, 807 |
| Hpy188I | TCNGA | 3 cut(s) | 10, 504, 750 |
| Hpy188III | TCNNGA | 5 cut(s) | 266, 301, 308, 496, 548 |
| Hpy8I | GTNNAC | 2 cut(s) | 54, 807 |
| HpyCH4IV | ACGT | 1 cut(s) | 21 |
| HpyCH4V | TGCA | 2 cut(s) | 84, 713 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 406, 652 |
| HpyF3I | CTNAG | 2 cut(s) | 358, 749 |
| HpySE526I | ACGT | 1 cut(s) | 21 |
| KspAI | GTTAAC | 1 cut(s) | 807 |
| Kzo9I | GATC | 5 cut(s) | 121, 217, 221, 270, 274 |
| LpnPI | CCDG | 4 cut(s) | 48, 75, 382, 690 |
| LweI | GCATC | 2 cut(s) | 135, 466 |
| MaeI | CTAG | 4 cut(s) | 132, 170, 212, 579 |
| MaeII | ACGT | 1 cut(s) | 21 |
| MaeIII | GTNAC | 2 cut(s) | 226, 598 |
| MalI | GATC | 5 cut(s) | 123, 219, 223, 272, 276 |
| MboI | GATC | 5 cut(s) | 121, 217, 221, 270, 274 |
| MboII | GAAGA | 7 cut(s) | 23, 90, 329, 332, 428, 485, 605 |
| MfeI | CAATTG | 2 cut(s) | 87, 734 |
| MhlI | GDGCHC | 1 cut(s) | 529 |
| MluCI | AATT | 8 cut(s) | 87, 336, 518, 561, 606, 622, 690, 734 |
| MlyI | GAGTC | 1 cut(s) | 785 |
| MmeI | TCCRAC | 2 cut(s) | 560, 629 |
| MnlI | CCTC | 5 cut(s) | 296, 555, 642, 645, 744 |
| MroXI | GAANNNNTTC | 1 cut(s) | 97 |
| MseI | TTAA | 7 cut(s) | 138, 162, 281, 453, 489, 585, 806 |
| MslI | CAYNNNNRTG | 1 cut(s) | 660 |
| MspI | CCGG | 1 cut(s) | 369 |
| MspR9I | CCNGG | 1 cut(s) | 63 |
| MunI | CAATTG | 2 cut(s) | 87, 734 |
| MvaI | CCWGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 406, 652 |
| NdeII | GATC | 5 cut(s) | 121, 217, 221, 270, 274 |
| NlaIV | GGNNCC | 2 cut(s) | 656, 675 |
| NmuCI | GTSAC | 1 cut(s) | 226 |
| PdmI | GAANNNNTTC | 1 cut(s) | 97 |
| PfeI | GAWTC | 4 cut(s) | 76, 304, 331, 499 |
| PleI | GAGTC | 1 cut(s) | 784 |
| PpsI | GAGTC | 1 cut(s) | 784 |
| PpuMI | RGGWCCY | 1 cut(s) | 674 |
| PshBI | ATTAAT | 1 cut(s) | 489 |
| Psp1406I | AACGTT | 1 cut(s) | 21 |
| Psp5II | RGGWCCY | 1 cut(s) | 674 |
| Psp6I | CCWGG | 1 cut(s) | 61 |
| PspGI | CCWGG | 1 cut(s) | 61 |
| PspN4I | GGNNCC | 2 cut(s) | 656, 675 |
| PspPI | GGNCC | 1 cut(s) | 674 |
| PspPPI | RGGWCCY | 1 cut(s) | 674 |
| RsaI | GTAC | 1 cut(s) | 373 |
| RsaNI | GTAC | 1 cut(s) | 372 |
| RseI | CAYNNNNRTG | 1 cut(s) | 660 |
| SaqAI | TTAA | 7 cut(s) | 138, 162, 281, 453, 489, 585, 806 |
| Sau3AI | GATC | 5 cut(s) | 121, 217, 221, 270, 274 |
| Sau96I | GGNCC | 1 cut(s) | 674 |
| SchI | GAGTC | 1 cut(s) | 785 |
| ScrFI | CCNGG | 1 cut(s) | 63 |
| SduI | GDGCHC | 1 cut(s) | 529 |
| SfaNI | GCATC | 2 cut(s) | 135, 466 |
| SfcI | CTRYAG | 1 cut(s) | 291 |
| SinI | GGWCC | 1 cut(s) | 674 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 660 |
| Sse9I | AATT | 8 cut(s) | 87, 336, 518, 561, 606, 622, 690, 734 |
| SsiI | CCGC | 1 cut(s) | 215 |
| SspMI | CTAG | 4 cut(s) | 132, 170, 212, 579 |
| StyD4I | CCNGG | 1 cut(s) | 61 |
| TaiI | ACGT | 1 cut(s) | 24 |
| TaqI | TCGA | 5 cut(s) | 220, 265, 273, 523, 549 |
| TasI | AATT | 8 cut(s) | 87, 336, 518, 561, 606, 622, 690, 734 |
| TfiI | GAWTC | 4 cut(s) | 76, 304, 331, 499 |
| Tru1I | TTAA | 7 cut(s) | 138, 162, 281, 453, 489, 585, 806 |
| Tru9I | TTAA | 7 cut(s) | 138, 162, 281, 453, 489, 585, 806 |
| TseFI | GTSAC | 1 cut(s) | 226 |
| Tsp45I | GTSAC | 1 cut(s) | 226 |
| TspDTI | ATGAA | 5 cut(s) | 200, 554, 558, 678, 701 |
| VpaK11BI | GGWCC | 1 cut(s) | 674 |
| VspI | ATTAAT | 1 cut(s) | 489 |
| XapI | RAATTY | 2 cut(s) | 518, 690 |
| XmnI | GAANNNNTTC | 1 cut(s) | 97 |
| XspI | CTAG | 4 cut(s) | 132, 170, 212, 579 |