transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 112 |
| Acc36I | ACCTGC | 1 cut(s) | 112 |
| AciI | CCGC | 3 cut(s) | 72, 107, 215 |
| AclWI | GGATC | 5 cut(s) | 225, 273, 286, 330, 415 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 54, 180, 508 |
| AflIII | ACRYGT | 1 cut(s) | 23 |
| AgsI | TTSAA | 2 cut(s) | 431, 471 |
| AhlI | ACTAGT | 1 cut(s) | 200 |
| AjnI | CCWGG | 1 cut(s) | 444 |
| AluBI | AGCT | 2 cut(s) | 77, 86 |
| AluI | AGCT | 2 cut(s) | 77, 86 |
| Alw21I | GWGCWC | 1 cut(s) | 200 |
| Alw26I | GTCTC | 2 cut(s) | 5, 160 |
| AlwI | GGATC | 5 cut(s) | 225, 273, 286, 330, 415 |
| ApeKI | GCWGC | 1 cut(s) | 74 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 491 |
| AspS9I | GGNCC | 4 cut(s) | 400, 456, 476, 532 |
| AsuHPI | GGTGA | 3 cut(s) | 93, 205, 226 |
| AvaII | GGWCC | 4 cut(s) | 400, 456, 476, 532 |
| BaeGI | GKGCMC | 1 cut(s) | 139 |
| BamHI | GGATCC | 1 cut(s) | 278 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 27, 59 |
| Bbv12I | GWGCWC | 1 cut(s) | 200 |
| BbvI | GCAGC | 1 cut(s) | 86 |
| BccI | CCATC | 1 cut(s) | 443 |
| BciT130I | CCWGG | 1 cut(s) | 446 |
| BcoDI | GTCTC | 2 cut(s) | 5, 160 |
| BcuI | ACTAGT | 1 cut(s) | 200 |
| BfaI | CTAG | 1 cut(s) | 201 |
| BfuAI | ACCTGC | 1 cut(s) | 112 |
| BisI | GCNGC | 2 cut(s) | 72, 75 |
| BlsI | GCNGC | 2 cut(s) | 73, 76 |
| Bme1390I | CCNGG | 1 cut(s) | 446 |
| Bme18I | GGWCC | 4 cut(s) | 400, 456, 476, 532 |
| BmgT120I | GGNCC | 4 cut(s) | 400, 456, 476, 532 |
| BmiI | GGNNCC | 5 cut(s) | 280, 392, 401, 402, 457 |
| BmrFI | CCNGG | 1 cut(s) | 446 |
| BmsI | GCATC | 1 cut(s) | 58 |
| BpmI | CTGGAG | 1 cut(s) | 99 |
| BpuEI | CTTGAG | 2 cut(s) | 249, 512 |
| BsaI | GGTCTC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 5 cut(s) | 48, 307, 394, 412, 444 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 75, 105 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 54, 180, 508 |
| Bse3DI | GCAATG | 1 cut(s) | 210 |
| BseBI | CCWGG | 1 cut(s) | 446 |
| BseDI | CCNNGG | 5 cut(s) | 48, 307, 394, 412, 444 |
| BseGI | GGATG | 2 cut(s) | 313, 454 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 54, 180, 508 |
| BseMI | GCAATG | 1 cut(s) | 210 |
| BseRI | GAGGAG | 2 cut(s) | 96, 551 |
| BseSI | GKGCMC | 1 cut(s) | 139 |
| BseXI | GCAGC | 1 cut(s) | 86 |
| BsiHKAI | GWGCWC | 1 cut(s) | 200 |
| BslFI | GGGAC | 2 cut(s) | 386, 469 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 54, 180, 508 |
| BsmAI | GTCTC | 2 cut(s) | 5, 160 |
| BsmFI | GGGAC | 2 cut(s) | 386, 469 |
| BsmI | GAATGC | 1 cut(s) | 373 |
| Bso31I | GGTCTC | 1 cut(s) | 5 |
| Bsp1286I | GDGCHC | 2 cut(s) | 139, 200 |
| Bsp143I | GATC | 4 cut(s) | 217, 278, 322, 420 |
| BspACI | CCGC | 3 cut(s) | 72, 107, 215 |
| BspLI | GGNNCC | 5 cut(s) | 280, 392, 401, 402, 457 |
| BspMI | ACCTGC | 1 cut(s) | 112 |
| BspPI | GGATC | 5 cut(s) | 225, 273, 286, 330, 415 |
| BspTNI | GGTCTC | 1 cut(s) | 5 |
| BsrDI | GCAATG | 1 cut(s) | 210 |
| BssECI | CCNNGG | 5 cut(s) | 48, 307, 394, 412, 444 |
| BssMI | GATC | 4 cut(s) | 217, 278, 322, 420 |
| BssT1I | CCWWGG | 4 cut(s) | 48, 307, 394, 412 |
| Bst2UI | CCWGG | 1 cut(s) | 446 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 134 |
| BstDEI | CTNAG | 1 cut(s) | 338 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 52 |
| BstF5I | GGATG | 2 cut(s) | 313, 454 |
| BstKTI | GATC | 4 cut(s) | 220, 281, 325, 423 |
| BstMAI | GTCTC | 2 cut(s) | 5, 160 |
| BstMBI | GATC | 4 cut(s) | 217, 278, 322, 420 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 83, 134 |
| BstNI | CCWGG | 1 cut(s) | 446 |
| BstNSI | RCATGY | 2 cut(s) | 27, 558 |
| BstSCI | CCNGG | 1 cut(s) | 444 |
| BstSLI | GKGCMC | 1 cut(s) | 139 |
| BstV1I | GCAGC | 1 cut(s) | 86 |
| BstX2I | RGATCY | 1 cut(s) | 278 |
| BstYI | RGATCY | 1 cut(s) | 278 |
| BtsCI | GGATG | 2 cut(s) | 313, 454 |
| BveI | ACCTGC | 1 cut(s) | 112 |
| Cfr13I | GGNCC | 4 cut(s) | 400, 456, 476, 532 |
| CviAII | CATG | 3 cut(s) | 24, 272, 555 |
| CviJI | RGCY | 3 cut(s) | 77, 86, 381 |
| CviKI_1 | RGCY | 3 cut(s) | 77, 86, 381 |
| DdeI | CTNAG | 1 cut(s) | 338 |
| DpnI | GATC | 4 cut(s) | 219, 280, 324, 422 |
| DpnII | GATC | 4 cut(s) | 217, 278, 322, 420 |
| Eco130I | CCWWGG | 4 cut(s) | 48, 307, 394, 412 |
| Eco31I | GGTCTC | 1 cut(s) | 5 |
| Eco47I | GGWCC | 4 cut(s) | 400, 456, 476, 532 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 52 |
| EcoO109I | RGGNCCY | 2 cut(s) | 400, 532 |
| EcoRII | CCWGG | 1 cut(s) | 444 |
| EcoT14I | CCWWGG | 4 cut(s) | 48, 307, 394, 412 |
| ErhI | CCWWGG | 4 cut(s) | 48, 307, 394, 412 |
| FaeI | CATG | 3 cut(s) | 27, 275, 558 |
| FaqI | GGGAC | 2 cut(s) | 386, 469 |
| FatI | CATG | 3 cut(s) | 23, 271, 554 |
| Fnu4HI | GCNGC | 2 cut(s) | 72, 75 |
| FokI | GGATG | 2 cut(s) | 300, 461 |
| Fsp4HI | GCNGC | 2 cut(s) | 72, 75 |
| FspBI | CTAG | 1 cut(s) | 201 |
| GluI | GCNGC | 2 cut(s) | 72, 75 |
| GsuI | CTGGAG | 1 cut(s) | 99 |
| Hin1II | CATG | 3 cut(s) | 27, 275, 558 |
| HinfI | GANTC | 2 cut(s) | 39, 359 |
| HphI | GGTGA | 3 cut(s) | 93, 205, 226 |
| Hpy166II | GTNNAC | 2 cut(s) | 247, 476 |
| Hpy188I | TCNGA | 1 cut(s) | 497 |
| Hpy8I | GTNNAC | 2 cut(s) | 247, 476 |
| HpyAV | CCTTC | 4 cut(s) | 26, 29, 109, 248 |
| HpyCH4IV | ACGT | 2 cut(s) | 408, 522 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 83, 134 |
| HpyF3I | CTNAG | 1 cut(s) | 338 |
| HpySE526I | ACGT | 2 cut(s) | 408, 522 |
| Hsp92II | CATG | 3 cut(s) | 27, 275, 558 |
| KflI | GGGWCCC | 1 cut(s) | 400 |
| Kzo9I | GATC | 4 cut(s) | 217, 278, 322, 420 |
| LmnI | GCTCC | 1 cut(s) | 83 |
| LpnPI | CCDG | 5 cut(s) | 63, 117, 219, 431, 458 |
| Lsp1109I | GCAGC | 1 cut(s) | 86 |
| LweI | GCATC | 1 cut(s) | 58 |
| MaeI | CTAG | 1 cut(s) | 201 |
| MaeII | ACGT | 2 cut(s) | 408, 522 |
| MaeIII | GTNAC | 1 cut(s) | 99 |
| MalI | GATC | 4 cut(s) | 219, 280, 324, 422 |
| MboI | GATC | 4 cut(s) | 217, 278, 322, 420 |
| MfeI | CAATTG | 1 cut(s) | 221 |
| MflI | RGATCY | 1 cut(s) | 278 |
| MhlI | GDGCHC | 2 cut(s) | 139, 200 |
| MluCI | AATT | 1 cut(s) | 221 |
| MlyI | GAGTC | 2 cut(s) | 33, 368 |
| MmeI | TCCRAC | 1 cut(s) | 543 |
| MroXI | GAANNNNTTC | 1 cut(s) | 491 |
| MspA1I | CMGCKG | 1 cut(s) | 77 |
| MspR9I | CCNGG | 1 cut(s) | 446 |
| MunI | CAATTG | 1 cut(s) | 221 |
| Mva1269I | GAATGC | 1 cut(s) | 373 |
| MvaI | CCWGG | 1 cut(s) | 446 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 83, 134 |
| NdeII | GATC | 4 cut(s) | 217, 278, 322, 420 |
| NlaIII | CATG | 3 cut(s) | 27, 275, 558 |
| NlaIV | GGNNCC | 5 cut(s) | 280, 392, 401, 402, 457 |
| NmuCI | GTSAC | 1 cut(s) | 99 |
| NspI | RCATGY | 2 cut(s) | 27, 558 |
| PaqCI | CACCTGC | 1 cut(s) | 112 |
| PciI | ACATGT | 1 cut(s) | 23 |
| PctI | GAATGC | 1 cut(s) | 373 |
| PdmI | GAANNNNTTC | 1 cut(s) | 491 |
| PkrI | GCNGC | 2 cut(s) | 73, 76 |
| PleI | GAGTC | 2 cut(s) | 33, 367 |
| PpsI | GAGTC | 2 cut(s) | 33, 367 |
| PpuMI | RGGWCCY | 2 cut(s) | 400, 532 |
| PscI | ACATGT | 1 cut(s) | 23 |
| Psp5II | RGGWCCY | 2 cut(s) | 400, 532 |
| Psp6I | CCWGG | 1 cut(s) | 444 |
| PspGI | CCWGG | 1 cut(s) | 444 |
| PspN4I | GGNNCC | 5 cut(s) | 280, 392, 401, 402, 457 |
| PspPI | GGNCC | 4 cut(s) | 400, 456, 476, 532 |
| PspPPI | RGGWCCY | 2 cut(s) | 400, 532 |
| PsuI | RGATCY | 1 cut(s) | 278 |
| PvuII | CAGCTG | 1 cut(s) | 77 |
| SatI | GCNGC | 2 cut(s) | 72, 75 |
| Sau3AI | GATC | 4 cut(s) | 217, 278, 322, 420 |
| Sau96I | GGNCC | 4 cut(s) | 400, 456, 476, 532 |
| SchI | GAGTC | 2 cut(s) | 33, 368 |
| ScrFI | CCNGG | 1 cut(s) | 446 |
| SduI | GDGCHC | 2 cut(s) | 139, 200 |
| SfaNI | GCATC | 1 cut(s) | 58 |
| SinI | GGWCC | 4 cut(s) | 400, 456, 476, 532 |
| SmlI | CTYRAG | 2 cut(s) | 264, 527 |
| SmoI | CTYRAG | 2 cut(s) | 264, 527 |
| SpeI | ACTAGT | 1 cut(s) | 200 |
| Sse9I | AATT | 1 cut(s) | 221 |
| SsiI | CCGC | 3 cut(s) | 72, 107, 215 |
| SspMI | CTAG | 1 cut(s) | 201 |
| StyD4I | CCNGG | 1 cut(s) | 444 |
| StyI | CCWWGG | 4 cut(s) | 48, 307, 394, 412 |
| TaiI | ACGT | 2 cut(s) | 411, 525 |
| TasI | AATT | 1 cut(s) | 221 |
| TauI | GCSGC | 1 cut(s) | 74 |
| TseFI | GTSAC | 1 cut(s) | 99 |
| TseI | GCWGC | 1 cut(s) | 74 |
| Tsp45I | GTSAC | 1 cut(s) | 99 |
| TspDTI | ATGAA | 3 cut(s) | 17, 48, 500 |
| TspGWI | ACGGA | 1 cut(s) | 335 |
| VpaK11BI | GGWCC | 4 cut(s) | 400, 456, 476, 532 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 52 |
| XceI | RCATGY | 2 cut(s) | 27, 558 |
| XmnI | GAANNNNTTC | 1 cut(s) | 491 |
| XspI | CTAG | 1 cut(s) | 201 |