transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 3 cut(s) | 58, 456, 650 |
| AciI | CCGC | 1 cut(s) | 176 |
| AcsI | RAATTY | 4 cut(s) | 112, 232, 406, 678 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 58, 389, 456, 555, 650 |
| AgsI | TTSAA | 7 cut(s) | 38, 46, 126, 439, 571, 577, 601 |
| AjnI | CCWGG | 1 cut(s) | 475 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 223, 255 |
| AluBI | AGCT | 4 cut(s) | 193, 200, 266, 344 |
| AluI | AGCT | 4 cut(s) | 193, 200, 266, 344 |
| AoxI | GGCC | 4 cut(s) | 25, 49, 447, 625 |
| ApeKI | GCWGC | 1 cut(s) | 253 |
| ApoI | RAATTY | 4 cut(s) | 112, 232, 406, 678 |
| AspS9I | GGNCC | 1 cut(s) | 49 |
| AsuHPI | GGTGA | 2 cut(s) | 108, 228 |
| BbsI | GAAGAC | 1 cut(s) | 339 |
| BbvI | GCAGC | 1 cut(s) | 240 |
| BccI | CCATC | 4 cut(s) | 82, 166, 581, 683 |
| BceAI | ACGGC | 1 cut(s) | 485 |
| BciT130I | CCWGG | 1 cut(s) | 477 |
| BfaI | CTAG | 2 cut(s) | 120, 267 |
| BisI | GCNGC | 1 cut(s) | 254 |
| BlsI | GCNGC | 1 cut(s) | 255 |
| Bme1390I | CCNGG | 1 cut(s) | 477 |
| BmgT120I | GGNCC | 1 cut(s) | 49 |
| BmiI | GGNNCC | 1 cut(s) | 481 |
| BmrFI | CCNGG | 1 cut(s) | 477 |
| BmsI | GCATC | 2 cut(s) | 255, 487 |
| BpiI | GAAGAC | 1 cut(s) | 339 |
| BpuEI | CTTGAG | 1 cut(s) | 694 |
| BsaJI | CCNNGG | 2 cut(s) | 501, 649 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 58, 389, 456, 555, 650 |
| BseBI | CCWGG | 1 cut(s) | 477 |
| BseDI | CCNNGG | 2 cut(s) | 501, 649 |
| BseGI | GGATG | 3 cut(s) | 83, 420, 502 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 58, 389, 456, 555, 650 |
| BseMII | CTCAG | 1 cut(s) | 132 |
| BseRI | GAGGAG | 1 cut(s) | 182 |
| BseXI | GCAGC | 1 cut(s) | 240 |
| BshFI | GGCC | 4 cut(s) | 27, 51, 449, 627 |
| BslFI | GGGAC | 1 cut(s) | 573 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 58, 389, 456, 555, 650 |
| BsmFI | GGGAC | 1 cut(s) | 573 |
| BsnI | GGCC | 4 cut(s) | 27, 51, 449, 627 |
| Bsp143I | GATC | 1 cut(s) | 277 |
| Bsp19I | CCATGG | 1 cut(s) | 649 |
| BspACI | CCGC | 1 cut(s) | 176 |
| BspANI | GGCC | 4 cut(s) | 27, 51, 449, 627 |
| BspCNI | CTCAG | 1 cut(s) | 133 |
| BspLI | GGNNCC | 1 cut(s) | 481 |
| BssECI | CCNNGG | 2 cut(s) | 501, 649 |
| BssMI | GATC | 1 cut(s) | 277 |
| BssT1I | CCWWGG | 1 cut(s) | 649 |
| Bst2UI | CCWGG | 1 cut(s) | 477 |
| Bst4CI | ACNGT | 1 cut(s) | 42 |
| Bst6I | CTCTTC | 2 cut(s) | 96, 159 |
| BstC8I | GCNNGC | 1 cut(s) | 178 |
| BstDEI | CTNAG | 2 cut(s) | 141, 507 |
| BstDSI | CCRYGG | 2 cut(s) | 501, 649 |
| BstEII | GGTNACC | 1 cut(s) | 654 |
| BstF5I | GGATG | 3 cut(s) | 83, 420, 502 |
| BstKTI | GATC | 1 cut(s) | 280 |
| BstMBI | GATC | 1 cut(s) | 277 |
| BstNI | CCWGG | 1 cut(s) | 477 |
| BstPI | GGTNACC | 1 cut(s) | 654 |
| BstSCI | CCNGG | 1 cut(s) | 475 |
| BstV1I | GCAGC | 1 cut(s) | 240 |
| BstV2I | GAAGAC | 1 cut(s) | 339 |
| BsuRI | GGCC | 4 cut(s) | 27, 51, 449, 627 |
| BtgI | CCRYGG | 2 cut(s) | 501, 649 |
| BtsCI | GGATG | 3 cut(s) | 83, 420, 502 |
| Cac8I | GCNNGC | 1 cut(s) | 178 |
| Cfr13I | GGNCC | 1 cut(s) | 49 |
| CsiI | ACCWGGT | 1 cut(s) | 475 |
| CviAII | CATG | 3 cut(s) | 243, 492, 650 |
| DdeI | CTNAG | 2 cut(s) | 141, 507 |
| DpnI | GATC | 1 cut(s) | 279 |
| DpnII | GATC | 1 cut(s) | 277 |
| DraI | TTTAAA | 1 cut(s) | 622 |
| Eam1104I | CTCTTC | 2 cut(s) | 96, 159 |
| EarI | CTCTTC | 2 cut(s) | 96, 159 |
| Eco130I | CCWWGG | 1 cut(s) | 649 |
| Eco147I | AGGCCT | 1 cut(s) | 627 |
| Eco91I | GGTNACC | 1 cut(s) | 654 |
| EcoO65I | GGTNACC | 1 cut(s) | 654 |
| EcoRI | GAATTC | 1 cut(s) | 112 |
| EcoRII | CCWGG | 1 cut(s) | 475 |
| EcoT14I | CCWWGG | 1 cut(s) | 649 |
| EcoT22I | ATGCAT | 1 cut(s) | 248 |
| ErhI | CCWWGG | 1 cut(s) | 649 |
| FaeI | CATG | 3 cut(s) | 246, 495, 653 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 177, 209, 500, 532 |
| FaqI | GGGAC | 1 cut(s) | 573 |
| FatI | CATG | 3 cut(s) | 242, 491, 649 |
| FauI | CCCGC | 1 cut(s) | 169 |
| FauNDI | CATATG | 1 cut(s) | 300 |
| Fnu4HI | GCNGC | 1 cut(s) | 254 |
| FokI | GGATG | 3 cut(s) | 70, 427, 509 |
| Fsp4HI | GCNGC | 1 cut(s) | 254 |
| FspBI | CTAG | 2 cut(s) | 120, 267 |
| GluI | GCNGC | 1 cut(s) | 254 |
| HaeIII | GGCC | 4 cut(s) | 27, 51, 449, 627 |
| Hin1II | CATG | 3 cut(s) | 246, 495, 653 |
| HinfI | GANTC | 3 cut(s) | 137, 466, 714 |
| HphI | GGTGA | 2 cut(s) | 108, 228 |
| Hpy166II | GTNNAC | 2 cut(s) | 380, 644 |
| Hpy188I | TCNGA | 1 cut(s) | 142 |
| Hpy188III | TCNNGA | 2 cut(s) | 631, 711 |
| Hpy8I | GTNNAC | 2 cut(s) | 380, 644 |
| HpyAV | CCTTC | 5 cut(s) | 40, 101, 152, 249, 318 |
| HpyCH4III | ACNGT | 1 cut(s) | 42 |
| HpyCH4V | TGCA | 3 cut(s) | 246, 388, 676 |
| HpyF3I | CTNAG | 2 cut(s) | 141, 507 |
| Hsp92II | CATG | 3 cut(s) | 246, 495, 653 |
| Kzo9I | GATC | 1 cut(s) | 277 |
| LmnI | GCTCC | 1 cut(s) | 613 |
| LpnPI | CCDG | 3 cut(s) | 374, 462, 489 |
| Lsp1109I | GCAGC | 1 cut(s) | 240 |
| LweI | GCATC | 2 cut(s) | 255, 487 |
| MabI | ACCWGGT | 1 cut(s) | 475 |
| MaeI | CTAG | 2 cut(s) | 120, 267 |
| MaeIII | GTNAC | 1 cut(s) | 654 |
| MalI | GATC | 1 cut(s) | 279 |
| MboI | GATC | 1 cut(s) | 277 |
| MboII | GAAGA | 7 cut(s) | 110, 113, 176, 197, 279, 344, 559 |
| MluCI | AATT | 7 cut(s) | 33, 112, 146, 151, 232, 406, 678 |
| MlyI | GAGTC | 2 cut(s) | 460, 723 |
| MnlI | CCTC | 6 cut(s) | 97, 160, 199, 405, 494, 638 |
| Mph1103I | ATGCAT | 1 cut(s) | 248 |
| MseI | TTAA | 4 cut(s) | 150, 351, 554, 621 |
| MslI | CAYNNNNRTG | 1 cut(s) | 241 |
| MspR9I | CCNGG | 1 cut(s) | 477 |
| MvaI | CCWGG | 1 cut(s) | 477 |
| NcoI | CCATGG | 1 cut(s) | 649 |
| NdeI | CATATG | 1 cut(s) | 300 |
| NdeII | GATC | 1 cut(s) | 277 |
| NlaIII | CATG | 3 cut(s) | 246, 495, 653 |
| NlaIV | GGNNCC | 1 cut(s) | 481 |
| NsiI | ATGCAT | 1 cut(s) | 248 |
| PceI | AGGCCT | 1 cut(s) | 627 |
| PfeI | GAWTC | 1 cut(s) | 137 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 58, 456, 650 |
| PkrI | GCNGC | 1 cut(s) | 255 |
| PleI | GAGTC | 2 cut(s) | 460, 722 |
| PpsI | GAGTC | 2 cut(s) | 460, 722 |
| Psp6I | CCWGG | 1 cut(s) | 475 |
| PspEI | GGTNACC | 1 cut(s) | 654 |
| PspGI | CCWGG | 1 cut(s) | 475 |
| PspN4I | GGNNCC | 1 cut(s) | 481 |
| PspPI | GGNCC | 1 cut(s) | 49 |
| RseI | CAYNNNNRTG | 1 cut(s) | 241 |
| SaqAI | TTAA | 4 cut(s) | 150, 351, 554, 621 |
| SatI | GCNGC | 1 cut(s) | 254 |
| Sau3AI | GATC | 1 cut(s) | 277 |
| Sau96I | GGNCC | 1 cut(s) | 49 |
| SchI | GAGTC | 2 cut(s) | 460, 723 |
| ScrFI | CCNGG | 1 cut(s) | 477 |
| SexAI | ACCWGGT | 1 cut(s) | 475 |
| SfaNI | GCATC | 2 cut(s) | 255, 487 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 241 |
| SmlI | CTYRAG | 1 cut(s) | 709 |
| SmoI | CTYRAG | 1 cut(s) | 709 |
| Sse9I | AATT | 7 cut(s) | 33, 112, 146, 151, 232, 406, 678 |
| SseBI | AGGCCT | 1 cut(s) | 627 |
| SsiI | CCGC | 1 cut(s) | 176 |
| SspMI | CTAG | 2 cut(s) | 120, 267 |
| StuI | AGGCCT | 1 cut(s) | 627 |
| StyD4I | CCNGG | 1 cut(s) | 475 |
| StyI | CCWWGG | 1 cut(s) | 649 |
| TaaI | ACNGT | 1 cut(s) | 42 |
| TaqI | TCGA | 1 cut(s) | 196 |
| TasI | AATT | 7 cut(s) | 33, 112, 146, 151, 232, 406, 678 |
| TfiI | GAWTC | 1 cut(s) | 137 |
| Tru1I | TTAA | 4 cut(s) | 150, 351, 554, 621 |
| Tru9I | TTAA | 4 cut(s) | 150, 351, 554, 621 |
| TseI | GCWGC | 1 cut(s) | 253 |
| TspDTI | ATGAA | 4 cut(s) | 72, 231, 300, 345 |
| TspGWI | ACGGA | 1 cut(s) | 83 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 58, 456, 650 |
| XapI | RAATTY | 4 cut(s) | 112, 232, 406, 678 |
| XspI | CTAG | 2 cut(s) | 120, 267 |
| Zsp2I | ATGCAT | 1 cut(s) | 248 |