transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 385 |
| AccB1I | GGYRCC | 2 cut(s) | 320, 494 |
| AccII | CGCG | 1 cut(s) | 178 |
| AciI | CCGC | 3 cut(s) | 2, 43, 219 |
| AfaI | GTAC | 2 cut(s) | 181, 332 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 209, 317, 538 |
| AgsI | TTSAA | 4 cut(s) | 32, 449, 459, 518 |
| AhlI | ACTAGT | 1 cut(s) | 182 |
| AluBI | AGCT | 2 cut(s) | 282, 315 |
| AluI | AGCT | 2 cut(s) | 282, 315 |
| AoxI | GGCC | 3 cut(s) | 86, 211, 220 |
| AspLEI | GCGC | 1 cut(s) | 178 |
| AspS9I | GGNCC | 4 cut(s) | 86, 212, 221, 275 |
| AvaII | GGWCC | 1 cut(s) | 275 |
| BanI | GGYRCC | 2 cut(s) | 320, 494 |
| BanII | GRGCYC | 1 cut(s) | 203 |
| BbsI | GAAGAC | 1 cut(s) | 244 |
| BbvCI | CCTCAGC | 1 cut(s) | 316 |
| BccI | CCATC | 1 cut(s) | 165 |
| BclI | TGATCA | 1 cut(s) | 425 |
| BcuI | ACTAGT | 1 cut(s) | 182 |
| BfaI | CTAG | 4 cut(s) | 24, 166, 183, 346 |
| BfuAI | ACCTGC | 1 cut(s) | 385 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 219 |
| BglII | AGATCT | 1 cut(s) | 433 |
| BisI | GCNGC | 1 cut(s) | 220 |
| BlsI | GCNGC | 1 cut(s) | 221 |
| Bme18I | GGWCC | 1 cut(s) | 275 |
| BmgT120I | GGNCC | 4 cut(s) | 86, 212, 221, 275 |
| BmiI | GGNNCC | 3 cut(s) | 277, 322, 496 |
| BmrI | ACTGGG | 1 cut(s) | 363 |
| BmsI | GCATC | 1 cut(s) | 493 |
| BmuI | ACTGGG | 1 cut(s) | 363 |
| BpiI | GAAGAC | 1 cut(s) | 244 |
| Bpu10I | CCTNAGC | 1 cut(s) | 316 |
| BsaJI | CCNNGG | 1 cut(s) | 135 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 209, 317, 538 |
| Bse1I | ACTGG | 1 cut(s) | 369 |
| BseDI | CCNNGG | 1 cut(s) | 135 |
| BseGI | GGATG | 1 cut(s) | 269 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 209, 317, 538 |
| BseMII | CTCAG | 1 cut(s) | 307 |
| BseNI | ACTGG | 1 cut(s) | 369 |
| BseYI | CCCAGC | 1 cut(s) | 278 |
| Bsh1236I | CGCG | 1 cut(s) | 178 |
| BshFI | GGCC | 3 cut(s) | 88, 213, 222 |
| BshNI | GGYRCC | 2 cut(s) | 320, 494 |
| BsiSI | CCGG | 1 cut(s) | 89 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 209, 317, 538 |
| BsnI | GGCC | 3 cut(s) | 88, 213, 222 |
| Bsp1286I | GDGCHC | 1 cut(s) | 203 |
| Bsp143I | GATC | 3 cut(s) | 425, 433, 475 |
| BspACI | CCGC | 3 cut(s) | 2, 43, 219 |
| BspANI | GGCC | 3 cut(s) | 88, 213, 222 |
| BspCNI | CTCAG | 1 cut(s) | 308 |
| BspFNI | CGCG | 1 cut(s) | 178 |
| BspLI | GGNNCC | 3 cut(s) | 277, 322, 496 |
| BspMI | ACCTGC | 1 cut(s) | 385 |
| BspT107I | GGYRCC | 2 cut(s) | 320, 494 |
| BsrI | ACTGG | 1 cut(s) | 369 |
| BssECI | CCNNGG | 1 cut(s) | 135 |
| BssMI | GATC | 3 cut(s) | 425, 433, 475 |
| BssT1I | CCWWGG | 1 cut(s) | 135 |
| Bst4CI | ACNGT | 1 cut(s) | 125 |
| BstC8I | GCNNGC | 2 cut(s) | 148, 468 |
| BstDEI | CTNAG | 2 cut(s) | 256, 316 |
| BstF5I | GGATG | 1 cut(s) | 269 |
| BstFNI | CGCG | 1 cut(s) | 178 |
| BstHHI | GCGC | 1 cut(s) | 178 |
| BstKTI | GATC | 3 cut(s) | 428, 436, 478 |
| BstMBI | GATC | 3 cut(s) | 425, 433, 475 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 219 |
| BstNSI | RCATGY | 2 cut(s) | 150, 470 |
| BstUI | CGCG | 1 cut(s) | 178 |
| BstV2I | GAAGAC | 1 cut(s) | 244 |
| BstX2I | RGATCY | 1 cut(s) | 433 |
| BstYI | RGATCY | 1 cut(s) | 433 |
| BsuRI | GGCC | 3 cut(s) | 88, 213, 222 |
| BtsCI | GGATG | 1 cut(s) | 269 |
| BtsIMutI | CAGTG | 1 cut(s) | 130 |
| BveI | ACCTGC | 1 cut(s) | 385 |
| Cac8I | GCNNGC | 2 cut(s) | 148, 468 |
| CfoI | GCGC | 1 cut(s) | 178 |
| Cfr13I | GGNCC | 4 cut(s) | 86, 212, 221, 275 |
| Csp6I | GTAC | 2 cut(s) | 180, 331 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 274, 309 |
| CviAII | CATG | 2 cut(s) | 147, 467 |
| CviJI | RGCY | 7 cut(s) | 88, 156, 201, 213, 222, 282, 315 |
| CviKI_1 | RGCY | 7 cut(s) | 88, 156, 201, 213, 222, 282, 315 |
| CviQI | GTAC | 2 cut(s) | 180, 331 |
| DdeI | CTNAG | 2 cut(s) | 256, 316 |
| DpnI | GATC | 3 cut(s) | 427, 435, 477 |
| DpnII | GATC | 3 cut(s) | 425, 433, 475 |
| Eco130I | CCWWGG | 1 cut(s) | 135 |
| Eco24I | GRGCYC | 1 cut(s) | 203 |
| Eco47I | GGWCC | 1 cut(s) | 275 |
| EcoO109I | RGGNCCY | 1 cut(s) | 275 |
| EcoT14I | CCWWGG | 1 cut(s) | 135 |
| EcoT38I | GRGCYC | 1 cut(s) | 203 |
| ErhI | CCWWGG | 1 cut(s) | 135 |
| FaeI | CATG | 2 cut(s) | 150, 470 |
| FaiI | YATR | 6 cut(s) | 20, 148, 226, 381, 468, 527 |
| FatI | CATG | 2 cut(s) | 146, 466 |
| FauI | CCCGC | 1 cut(s) | 36 |
| FbaI | TGATCA | 1 cut(s) | 425 |
| Fnu4HI | GCNGC | 1 cut(s) | 220 |
| FokI | GGATG | 1 cut(s) | 276 |
| FriOI | GRGCYC | 1 cut(s) | 203 |
| Fsp4HI | GCNGC | 1 cut(s) | 220 |
| FspBI | CTAG | 4 cut(s) | 24, 166, 183, 346 |
| GlaI | GCGC | 1 cut(s) | 177 |
| GluI | GCNGC | 1 cut(s) | 220 |
| GsaI | CCCAGC | 1 cut(s) | 282 |
| HaeIII | GGCC | 3 cut(s) | 88, 213, 222 |
| HapII | CCGG | 1 cut(s) | 89 |
| HhaI | GCGC | 1 cut(s) | 178 |
| Hin1II | CATG | 2 cut(s) | 150, 470 |
| Hin6I | GCGC | 1 cut(s) | 176 |
| HinP1I | GCGC | 1 cut(s) | 176 |
| HincII | GTYRAC | 2 cut(s) | 188, 302 |
| HindII | GTYRAC | 2 cut(s) | 188, 302 |
| HinfI | GANTC | 1 cut(s) | 69 |
| HpaII | CCGG | 1 cut(s) | 89 |
| Hpy166II | GTNNAC | 2 cut(s) | 188, 302 |
| Hpy188I | TCNGA | 2 cut(s) | 68, 425 |
| Hpy188III | TCNNGA | 4 cut(s) | 24, 429, 449, 515 |
| Hpy8I | GTNNAC | 2 cut(s) | 188, 302 |
| HpyAV | CCTTC | 6 cut(s) | 203, 254, 266, 321, 446, 512 |
| HpyCH4III | ACNGT | 1 cut(s) | 125 |
| HpyCH4IV | ACGT | 1 cut(s) | 241 |
| HpyCH4V | TGCA | 2 cut(s) | 484, 529 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 219 |
| HpyF3I | CTNAG | 2 cut(s) | 256, 316 |
| HpySE526I | ACGT | 1 cut(s) | 241 |
| Hsp92II | CATG | 2 cut(s) | 150, 470 |
| HspAI | GCGC | 1 cut(s) | 176 |
| Ksp22I | TGATCA | 1 cut(s) | 425 |
| Kzo9I | GATC | 3 cut(s) | 425, 433, 475 |
| LpnPI | CCDG | 7 cut(s) | 88, 102, 209, 292, 380, 382, 477 |
| LweI | GCATC | 1 cut(s) | 493 |
| MaeI | CTAG | 4 cut(s) | 24, 166, 183, 346 |
| MaeII | ACGT | 1 cut(s) | 241 |
| MalI | GATC | 3 cut(s) | 427, 435, 477 |
| MboI | GATC | 3 cut(s) | 425, 433, 475 |
| MboII | GAAGA | 5 cut(s) | 243, 246, 249, 422, 437 |
| MflI | RGATCY | 1 cut(s) | 433 |
| MhlI | GDGCHC | 1 cut(s) | 203 |
| MluCI | AATT | 2 cut(s) | 27, 334 |
| MnlI | CCTC | 4 cut(s) | 202, 242, 311, 532 |
| MseI | TTAA | 1 cut(s) | 358 |
| MspI | CCGG | 1 cut(s) | 89 |
| MvnI | CGCG | 1 cut(s) | 178 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 219 |
| NdeII | GATC | 3 cut(s) | 425, 433, 475 |
| NlaIII | CATG | 2 cut(s) | 150, 470 |
| NlaIV | GGNNCC | 3 cut(s) | 277, 322, 496 |
| NspI | RCATGY | 2 cut(s) | 150, 470 |
| PaeI | GCATGC | 2 cut(s) | 150, 470 |
| PfeI | GAWTC | 1 cut(s) | 69 |
| PkrI | GCNGC | 1 cut(s) | 221 |
| PpuMI | RGGWCCY | 1 cut(s) | 275 |
| Psp5II | RGGWCCY | 1 cut(s) | 275 |
| PspFI | CCCAGC | 1 cut(s) | 278 |
| PspN4I | GGNNCC | 3 cut(s) | 277, 322, 496 |
| PspPI | GGNCC | 4 cut(s) | 86, 212, 221, 275 |
| PspPPI | RGGWCCY | 1 cut(s) | 275 |
| PsuI | RGATCY | 1 cut(s) | 433 |
| RsaI | GTAC | 2 cut(s) | 181, 332 |
| RsaNI | GTAC | 2 cut(s) | 180, 331 |
| SaqAI | TTAA | 1 cut(s) | 358 |
| SatI | GCNGC | 1 cut(s) | 220 |
| Sau3AI | GATC | 3 cut(s) | 425, 433, 475 |
| Sau96I | GGNCC | 4 cut(s) | 86, 212, 221, 275 |
| SduI | GDGCHC | 1 cut(s) | 203 |
| SetI | ASST | 9 cut(s) | 244, 253, 284, 317, 332, 386, 399, 457, 496 |
| SfaNI | GCATC | 1 cut(s) | 493 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 219 |
| SinI | GGWCC | 1 cut(s) | 275 |
| SpeI | ACTAGT | 1 cut(s) | 182 |
| SphI | GCATGC | 2 cut(s) | 150, 470 |
| Sse9I | AATT | 2 cut(s) | 27, 334 |
| SsiI | CCGC | 3 cut(s) | 2, 43, 219 |
| SspMI | CTAG | 4 cut(s) | 24, 166, 183, 346 |
| StyI | CCWWGG | 1 cut(s) | 135 |
| TaaI | ACNGT | 1 cut(s) | 125 |
| TaiI | ACGT | 1 cut(s) | 244 |
| TaqI | TCGA | 1 cut(s) | 478 |
| TasI | AATT | 2 cut(s) | 27, 334 |
| TauI | GCSGC | 1 cut(s) | 222 |
| TfiI | GAWTC | 1 cut(s) | 69 |
| Tru1I | TTAA | 1 cut(s) | 358 |
| Tru9I | TTAA | 1 cut(s) | 358 |
| TscAI | CASTG | 1 cut(s) | 130 |
| TspDTI | ATGAA | 2 cut(s) | 61, 244 |
| TspRI | CASTG | 1 cut(s) | 130 |
| VpaK11BI | GGWCC | 1 cut(s) | 275 |
| XbaI | TCTAGA | 1 cut(s) | 23 |
| XceI | RCATGY | 2 cut(s) | 150, 470 |
| XspI | CTAG | 4 cut(s) | 24, 166, 183, 346 |