transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 900 |
| Acc36I | ACCTGC | 1 cut(s) | 994 |
| AciI | CCGC | 2 cut(s) | 209, 532 |
| AclI | AACGTT | 1 cut(s) | 352 |
| AclWI | GGATC | 1 cut(s) | 818 |
| AcsI | RAATTY | 3 cut(s) | 701, 943, 1097 |
| AcuI | CTGAAG | 1 cut(s) | 392 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 994 |
| AjnI | CCWGG | 2 cut(s) | 913, 958 |
| AluBI | AGCT | 6 cut(s) | 32, 166, 370, 476, 632, 1084 |
| AluI | AGCT | 6 cut(s) | 32, 166, 370, 476, 632, 1084 |
| Alw21I | GWGCWC | 1 cut(s) | 1059 |
| Alw26I | GTCTC | 2 cut(s) | 958, 978 |
| AlwI | GGATC | 1 cut(s) | 818 |
| AoxI | GGCC | 3 cut(s) | 23, 529, 985 |
| ApaI | GGGCCC | 1 cut(s) | 989 |
| ApoI | RAATTY | 3 cut(s) | 701, 943, 1097 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 935, 967 |
| AseI | ATTAAT | 2 cut(s) | 84, 95 |
| AspS9I | GGNCC | 4 cut(s) | 529, 841, 985, 986 |
| AsuC2I | CCSGG | 2 cut(s) | 553, 593 |
| AsuHPI | GGTGA | 3 cut(s) | 371, 1009, 1075 |
| AvaII | GGWCC | 1 cut(s) | 841 |
| BaeGI | GKGCMC | 1 cut(s) | 989 |
| BanII | GRGCYC | 1 cut(s) | 989 |
| BauI | CACGAG | 1 cut(s) | 693 |
| BbsI | GAAGAC | 1 cut(s) | 68 |
| Bbv12I | GWGCWC | 1 cut(s) | 1059 |
| BccI | CCATC | 3 cut(s) | 127, 677, 832 |
| BceAI | ACGGC | 1 cut(s) | 319 |
| BciT130I | CCWGG | 2 cut(s) | 915, 960 |
| BcnI | CCSGG | 2 cut(s) | 553, 593 |
| BcoDI | GTCTC | 2 cut(s) | 958, 978 |
| BfaI | CTAG | 4 cut(s) | 248, 318, 423, 542 |
| BfuAI | ACCTGC | 1 cut(s) | 994 |
| BglII | AGATCT | 1 cut(s) | 244 |
| BisI | GCNGC | 1 cut(s) | 532 |
| BlsI | GCNGC | 1 cut(s) | 533 |
| Bme1390I | CCNGG | 4 cut(s) | 553, 593, 915, 960 |
| Bme18I | GGWCC | 1 cut(s) | 841 |
| BmgT120I | GGNCC | 4 cut(s) | 529, 841, 985, 986 |
| BmiI | GGNNCC | 2 cut(s) | 987, 1131 |
| BmrFI | CCNGG | 4 cut(s) | 553, 593, 915, 960 |
| BmsI | GCATC | 2 cut(s) | 91, 664 |
| BoxI | GACNNNNGTC | 1 cut(s) | 970 |
| BpiI | GAAGAC | 1 cut(s) | 68 |
| BpmI | CTGGAG | 1 cut(s) | 367 |
| BpuEI | CTTGAG | 1 cut(s) | 1043 |
| BpuMI | CCSGG | 2 cut(s) | 553, 593 |
| BsaJI | CCNNGG | 1 cut(s) | 959 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 994 |
| Bse1I | ACTGG | 1 cut(s) | 1133 |
| BseBI | CCWGG | 2 cut(s) | 915, 960 |
| BseDI | CCNNGG | 1 cut(s) | 959 |
| BseGI | GGATG | 2 cut(s) | 505, 640 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 994 |
| BseNI | ACTGG | 1 cut(s) | 1133 |
| BseRI | GAGGAG | 1 cut(s) | 441 |
| BseSI | GKGCMC | 1 cut(s) | 989 |
| BsgI | GTGCAG | 1 cut(s) | 223 |
| BshFI | GGCC | 3 cut(s) | 25, 531, 987 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1059 |
| BsiSI | CCGG | 3 cut(s) | 553, 576, 592 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 994 |
| BsmAI | GTCTC | 2 cut(s) | 958, 978 |
| BsmI | GAATGC | 1 cut(s) | 665 |
| BsnI | GGCC | 3 cut(s) | 25, 531, 987 |
| Bsp120I | GGGCCC | 1 cut(s) | 985 |
| Bsp1286I | GDGCHC | 2 cut(s) | 989, 1059 |
| Bsp143I | GATC | 5 cut(s) | 37, 244, 601, 823, 1137 |
| BspACI | CCGC | 2 cut(s) | 209, 532 |
| BspANI | GGCC | 3 cut(s) | 25, 531, 987 |
| BspLI | GGNNCC | 2 cut(s) | 987, 1131 |
| BspMI | ACCTGC | 1 cut(s) | 994 |
| BspPI | GGATC | 1 cut(s) | 818 |
| BsrI | ACTGG | 1 cut(s) | 1133 |
| BssECI | CCNNGG | 1 cut(s) | 959 |
| BssMI | GATC | 5 cut(s) | 37, 244, 601, 823, 1137 |
| BssSI | CACGAG | 1 cut(s) | 693 |
| Bst2BI | CACGAG | 1 cut(s) | 693 |
| Bst2UI | CCWGG | 2 cut(s) | 915, 960 |
| Bst4CI | ACNGT | 5 cut(s) | 45, 201, 610, 770, 1019 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 226 |
| BstC8I | GCNNGC | 2 cut(s) | 665, 1108 |
| BstDEI | CTNAG | 1 cut(s) | 310 |
| BstF5I | GGATG | 2 cut(s) | 505, 640 |
| BstKTI | GATC | 5 cut(s) | 40, 247, 604, 826, 1140 |
| BstMAI | GTCTC | 2 cut(s) | 958, 978 |
| BstMBI | GATC | 5 cut(s) | 37, 244, 601, 823, 1137 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 226, 805 |
| BstNI | CCWGG | 2 cut(s) | 915, 960 |
| BstNSI | RCATGY | 1 cut(s) | 667 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 970 |
| BstSCI | CCNGG | 4 cut(s) | 551, 591, 913, 958 |
| BstSLI | GKGCMC | 1 cut(s) | 989 |
| BstV2I | GAAGAC | 1 cut(s) | 68 |
| BstX2I | RGATCY | 2 cut(s) | 244, 823 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 526 |
| BstYI | RGATCY | 2 cut(s) | 244, 823 |
| BsuRI | GGCC | 3 cut(s) | 25, 531, 987 |
| BtsCI | GGATG | 2 cut(s) | 505, 640 |
| BtsI | GCAGTG | 1 cut(s) | 211 |
| BtsIMutI | CAGTG | 3 cut(s) | 206, 211, 1140 |
| BveI | ACCTGC | 1 cut(s) | 994 |
| Cac8I | GCNNGC | 2 cut(s) | 665, 1108 |
| Cfr13I | GGNCC | 4 cut(s) | 529, 841, 985, 986 |
| CviAII | CATG | 4 cut(s) | 496, 645, 664, 884 |
| DdeI | CTNAG | 1 cut(s) | 310 |
| DpnI | GATC | 5 cut(s) | 39, 246, 603, 825, 1139 |
| DpnII | GATC | 5 cut(s) | 37, 244, 601, 823, 1137 |
| DraI | TTTAAA | 1 cut(s) | 349 |
| Eco147I | AGGCCT | 1 cut(s) | 25 |
| Eco24I | GRGCYC | 1 cut(s) | 989 |
| Eco47I | GGWCC | 1 cut(s) | 841 |
| Eco57I | CTGAAG | 1 cut(s) | 392 |
| EcoO109I | RGGNCCY | 2 cut(s) | 985, 986 |
| EcoRII | CCWGG | 2 cut(s) | 913, 958 |
| EcoT22I | ATGCAT | 3 cut(s) | 665, 679, 1091 |
| EcoT38I | GRGCYC | 1 cut(s) | 989 |
| FaeI | CATG | 4 cut(s) | 499, 648, 667, 887 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1099, 1131 |
| FatI | CATG | 4 cut(s) | 495, 644, 663, 883 |
| Fnu4HI | GCNGC | 1 cut(s) | 532 |
| FokI | GGATG | 2 cut(s) | 512, 627 |
| FriOI | GRGCYC | 1 cut(s) | 989 |
| Fsp4HI | GCNGC | 1 cut(s) | 532 |
| FspBI | CTAG | 4 cut(s) | 248, 318, 423, 542 |
| GluI | GCNGC | 1 cut(s) | 532 |
| GsuI | CTGGAG | 1 cut(s) | 367 |
| HaeIII | GGCC | 3 cut(s) | 25, 531, 987 |
| HapII | CCGG | 3 cut(s) | 553, 576, 592 |
| Hin1II | CATG | 4 cut(s) | 499, 648, 667, 887 |
| HincII | GTYRAC | 2 cut(s) | 48, 457 |
| HindII | GTYRAC | 2 cut(s) | 48, 457 |
| HindIII | AAGCTT | 1 cut(s) | 164 |
| HinfI | GANTC | 9 cut(s) | 173, 187, 429, 556, 742, 754, 971, 1112, 1120 |
| HpaII | CCGG | 3 cut(s) | 553, 576, 592 |
| HphI | GGTGA | 3 cut(s) | 371, 1009, 1075 |
| Hpy166II | GTNNAC | 4 cut(s) | 48, 325, 457, 1027 |
| Hpy188I | TCNGA | 4 cut(s) | 178, 828, 1125, 1142 |
| Hpy188III | TCNNGA | 4 cut(s) | 11, 170, 758, 862 |
| Hpy8I | GTNNAC | 4 cut(s) | 48, 325, 457, 1027 |
| HpyAV | CCTTC | 3 cut(s) | 356, 976, 1120 |
| HpyCH4III | ACNGT | 5 cut(s) | 45, 201, 610, 770, 1019 |
| HpyCH4IV | ACGT | 2 cut(s) | 352, 1023 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 226, 805 |
| HpyF3I | CTNAG | 1 cut(s) | 310 |
| HpySE526I | ACGT | 2 cut(s) | 352, 1023 |
| Hsp92II | CATG | 4 cut(s) | 499, 648, 667, 887 |
| Kzo9I | GATC | 5 cut(s) | 37, 244, 601, 823, 1137 |
| LweI | GCATC | 2 cut(s) | 91, 664 |
| MaeI | CTAG | 4 cut(s) | 248, 318, 423, 542 |
| MaeII | ACGT | 2 cut(s) | 352, 1023 |
| MaeIII | GTNAC | 3 cut(s) | 706, 764, 1019 |
| MalI | GATC | 5 cut(s) | 39, 246, 603, 825, 1139 |
| MboI | GATC | 5 cut(s) | 37, 244, 601, 823, 1137 |
| MboII | GAAGA | 5 cut(s) | 73, 250, 449, 611, 1078 |
| MfeI | CAATTG | 3 cut(s) | 395, 720, 794 |
| MflI | RGATCY | 2 cut(s) | 244, 823 |
| MhlI | GDGCHC | 2 cut(s) | 989, 1059 |
| MlyI | GAGTC | 6 cut(s) | 438, 550, 736, 980, 1114, 1121 |
| MmeI | TCCRAC | 1 cut(s) | 471 |
| MnlI | CCTC | 7 cut(s) | 15, 240, 391, 419, 496, 702, 1033 |
| Mph1103I | ATGCAT | 3 cut(s) | 665, 679, 1091 |
| MslI | CAYNNNNRTG | 3 cut(s) | 643, 645, 855 |
| MspA1I | CMGCKG | 1 cut(s) | 476 |
| MspI | CCGG | 3 cut(s) | 553, 576, 592 |
| MspR9I | CCNGG | 4 cut(s) | 553, 593, 915, 960 |
| MunI | CAATTG | 3 cut(s) | 395, 720, 794 |
| Mva1269I | GAATGC | 1 cut(s) | 665 |
| MvaI | CCWGG | 2 cut(s) | 915, 960 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 226, 805 |
| NciI | CCSGG | 2 cut(s) | 553, 593 |
| NdeII | GATC | 5 cut(s) | 37, 244, 601, 823, 1137 |
| NlaIII | CATG | 4 cut(s) | 499, 648, 667, 887 |
| NlaIV | GGNNCC | 2 cut(s) | 987, 1131 |
| NmuCI | GTSAC | 2 cut(s) | 706, 764 |
| NsiI | ATGCAT | 3 cut(s) | 665, 679, 1091 |
| NspI | RCATGY | 1 cut(s) | 667 |
| PaeI | GCATGC | 1 cut(s) | 667 |
| PceI | AGGCCT | 1 cut(s) | 25 |
| PctI | GAATGC | 1 cut(s) | 665 |
| PfeI | GAWTC | 3 cut(s) | 173, 187, 754 |
| PkrI | GCNGC | 1 cut(s) | 533 |
| PleI | GAGTC | 6 cut(s) | 437, 550, 736, 979, 1114, 1120 |
| PpsI | GAGTC | 6 cut(s) | 437, 550, 736, 979, 1114, 1120 |
| PshAI | GACNNNNGTC | 1 cut(s) | 970 |
| PshBI | ATTAAT | 2 cut(s) | 84, 95 |
| PsiI | TTATAA | 1 cut(s) | 900 |
| Psp1406I | AACGTT | 1 cut(s) | 352 |
| Psp6I | CCWGG | 2 cut(s) | 913, 958 |
| PspGI | CCWGG | 2 cut(s) | 913, 958 |
| PspN4I | GGNNCC | 2 cut(s) | 987, 1131 |
| PspOMI | GGGCCC | 1 cut(s) | 985 |
| PspPI | GGNCC | 4 cut(s) | 529, 841, 985, 986 |
| PsuI | RGATCY | 2 cut(s) | 244, 823 |
| PvuII | CAGCTG | 1 cut(s) | 476 |
| RseI | CAYNNNNRTG | 3 cut(s) | 643, 645, 855 |
| SatI | GCNGC | 1 cut(s) | 532 |
| Sau3AI | GATC | 5 cut(s) | 37, 244, 601, 823, 1137 |
| Sau96I | GGNCC | 4 cut(s) | 529, 841, 985, 986 |
| SchI | GAGTC | 6 cut(s) | 438, 550, 736, 980, 1114, 1121 |
| ScrFI | CCNGG | 4 cut(s) | 553, 593, 915, 960 |
| SduI | GDGCHC | 2 cut(s) | 989, 1059 |
| SfaNI | GCATC | 2 cut(s) | 91, 664 |
| SinI | GGWCC | 1 cut(s) | 841 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 643, 645, 855 |
| SmlI | CTYRAG | 1 cut(s) | 1058 |
| SmoI | CTYRAG | 1 cut(s) | 1058 |
| SphI | GCATGC | 1 cut(s) | 667 |
| SseBI | AGGCCT | 1 cut(s) | 25 |
| SsiI | CCGC | 2 cut(s) | 209, 532 |
| SspMI | CTAG | 4 cut(s) | 248, 318, 423, 542 |
| StuI | AGGCCT | 1 cut(s) | 25 |
| StyD4I | CCNGG | 4 cut(s) | 551, 591, 913, 958 |
| TaaI | ACNGT | 5 cut(s) | 45, 201, 610, 770, 1019 |
| TaiI | ACGT | 2 cut(s) | 355, 1026 |
| TauI | GCSGC | 1 cut(s) | 534 |
| TfiI | GAWTC | 3 cut(s) | 173, 187, 754 |
| TscAI | CASTG | 3 cut(s) | 206, 211, 1140 |
| TseFI | GTSAC | 2 cut(s) | 706, 764 |
| Tsp45I | GTSAC | 2 cut(s) | 706, 764 |
| TspDTI | ATGAA | 1 cut(s) | 74 |
| TspRI | CASTG | 3 cut(s) | 206, 211, 1140 |
| VpaK11BI | GGWCC | 1 cut(s) | 841 |
| VspI | ATTAAT | 2 cut(s) | 84, 95 |
| XapI | RAATTY | 3 cut(s) | 701, 943, 1097 |
| XceI | RCATGY | 1 cut(s) | 667 |
| XspI | CTAG | 4 cut(s) | 248, 318, 423, 542 |
| Zsp2I | ATGCAT | 3 cut(s) | 665, 679, 1091 |