transposition, RNA-mediated
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 54, 205 |
| AfaI | GTAC | 1 cut(s) | 16 |
| AflII | CTTAAG | 1 cut(s) | 98 |
| AluBI | AGCT | 2 cut(s) | 97, 161 |
| AluI | AGCT | 2 cut(s) | 97, 161 |
| AlwI | GGATC | 2 cut(s) | 54, 205 |
| AsuC2I | CCSGG | 1 cut(s) | 195 |
| BcnI | CCSGG | 1 cut(s) | 195 |
| BfrI | CTTAAG | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 1 cut(s) | 195 |
| BmrFI | CCNGG | 1 cut(s) | 195 |
| BmsI | GCATC | 1 cut(s) | 72 |
| Bpu10I | CCTNAGC | 1 cut(s) | 162 |
| BpuMI | CCSGG | 1 cut(s) | 195 |
| Bse3DI | GCAATG | 1 cut(s) | 39 |
| BseGI | GGATG | 1 cut(s) | 121 |
| BseMI | GCAATG | 1 cut(s) | 39 |
| BsiSI | CCGG | 1 cut(s) | 194 |
| BsmI | GAATGC | 1 cut(s) | 140 |
| Bsp143I | GATC | 2 cut(s) | 46, 197 |
| BspPI | GGATC | 2 cut(s) | 54, 205 |
| BspTI | CTTAAG | 1 cut(s) | 98 |
| BsrDI | GCAATG | 1 cut(s) | 39 |
| BssMI | GATC | 2 cut(s) | 46, 197 |
| Bst4CI | ACNGT | 1 cut(s) | 14 |
| BstAFI | CTTAAG | 1 cut(s) | 98 |
| BstDEI | CTNAG | 1 cut(s) | 162 |
| BstF5I | GGATG | 1 cut(s) | 121 |
| BstKTI | GATC | 2 cut(s) | 49, 200 |
| BstMBI | GATC | 2 cut(s) | 46, 197 |
| BstSCI | CCNGG | 1 cut(s) | 193 |
| BtsCI | GGATG | 1 cut(s) | 121 |
| Csp6I | GTAC | 1 cut(s) | 15 |
| CviAII | CATG | 1 cut(s) | 210 |
| CviJI | RGCY | 4 cut(s) | 5, 97, 161, 178 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 97, 161, 178 |
| CviQI | GTAC | 1 cut(s) | 15 |
| DdeI | CTNAG | 1 cut(s) | 162 |
| DpnI | GATC | 2 cut(s) | 48, 199 |
| DpnII | GATC | 2 cut(s) | 46, 197 |
| FaeI | CATG | 1 cut(s) | 213 |
| FaiI | YATR | 2 cut(s) | 70, 211 |
| FatI | CATG | 1 cut(s) | 209 |
| FokI | GGATG | 1 cut(s) | 128 |
| HapII | CCGG | 1 cut(s) | 194 |
| Hin1II | CATG | 1 cut(s) | 213 |
| HpaII | CCGG | 1 cut(s) | 194 |
| HpyAV | CCTTC | 1 cut(s) | 77 |
| HpyCH4III | ACNGT | 1 cut(s) | 14 |
| HpyCH4V | TGCA | 2 cut(s) | 63, 80 |
| HpyF3I | CTNAG | 1 cut(s) | 162 |
| Hsp92II | CATG | 1 cut(s) | 213 |
| Kzo9I | GATC | 2 cut(s) | 46, 197 |
| LpnPI | CCDG | 1 cut(s) | 207 |
| LweI | GCATC | 1 cut(s) | 72 |
| MalI | GATC | 2 cut(s) | 48, 199 |
| MboI | GATC | 2 cut(s) | 46, 197 |
| MluCI | AATT | 1 cut(s) | 184 |
| MnlI | CCTC | 5 cut(s) | 15, 80, 112, 129, 201 |
| MseI | TTAA | 1 cut(s) | 99 |
| MspCI | CTTAAG | 1 cut(s) | 98 |
| MspI | CCGG | 1 cut(s) | 194 |
| MspR9I | CCNGG | 1 cut(s) | 195 |
| Mva1269I | GAATGC | 1 cut(s) | 140 |
| NciI | CCSGG | 1 cut(s) | 195 |
| NdeII | GATC | 2 cut(s) | 46, 197 |
| NlaIII | CATG | 1 cut(s) | 213 |
| PctI | GAATGC | 1 cut(s) | 140 |
| PfoI | TCCNGGA | 1 cut(s) | 193 |
| RsaI | GTAC | 1 cut(s) | 16 |
| RsaNI | GTAC | 1 cut(s) | 15 |
| SaqAI | TTAA | 1 cut(s) | 99 |
| Sau3AI | GATC | 2 cut(s) | 46, 197 |
| ScrFI | CCNGG | 1 cut(s) | 195 |
| SetI | ASST | 3 cut(s) | 99, 163, 193 |
| SfaNI | GCATC | 1 cut(s) | 72 |
| SgeI | CNNG | 4 cut(s) | 137, 142, 206, 207 |
| SmlI | CTYRAG | 1 cut(s) | 98 |
| SmoI | CTYRAG | 1 cut(s) | 98 |
| Sse9I | AATT | 1 cut(s) | 184 |
| StyD4I | CCNGG | 1 cut(s) | 193 |
| TaaI | ACNGT | 1 cut(s) | 14 |
| TasI | AATT | 1 cut(s) | 184 |
| TatI | WGTACW | 1 cut(s) | 14 |
| Tru1I | TTAA | 1 cut(s) | 99 |
| Tru9I | TTAA | 1 cut(s) | 99 |
| TspGWI | ACGGA | 1 cut(s) | 59 |
| Vha464I | CTTAAG | 1 cut(s) | 98 |