protein kinase activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 3272, 5199, 5960, 7147 |
| Acc36I | ACCTGC | 1 cut(s) | 693 |
| AccB1I | GGYRCC | 3 cut(s) | 1367, 3034, 3468 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 318, 6847 |
| AccI | GTMKAC | 6 cut(s) | 610, 2515, 2802, 4110, 6588, 6861 |
| AccII | CGCG | 3 cut(s) | 2154, 2222, 2916 |
| AciI | CCGC | 4 cut(s) | 181, 2220, 2921, 3725 |
| AclI | AACGTT | 4 cut(s) | 574, 649, 2615, 4394 |
| AclWI | GGATC | 9 cut(s) | 1089, 1779, 1850, 2096, 5099, 5668, 6286, 6688, 6739 |
| AcoI | YGGCCR | 1 cut(s) | 822 |
| AcuI | CTGAAG | 2 cut(s) | 1741, 5808 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 318, 1797, 2209, 2474, 3325, 3465, 6847 |
| AflII | CTTAAG | 2 cut(s) | 3485, 3608 |
| AflIII | ACRYGT | 9 cut(s) | 673, 1606, 1653, 3142, 4495, 4559, 5158, 5821, 6531 |
| AhlI | ACTAGT | 1 cut(s) | 613 |
| AjiI | CACGTC | 1 cut(s) | 3145 |
| AjnI | CCWGG | 5 cut(s) | 126, 2468, 2647, 4014, 5108 |
| AleI | CACNNNNGTG | 4 cut(s) | 2923, 3474, 4496, 4498 |
| Alw21I | GWGCWC | 3 cut(s) | 621, 1665, 1861 |
| Alw44I | GTGCAC | 1 cut(s) | 617 |
| AlwI | GGATC | 9 cut(s) | 1089, 1779, 1850, 2096, 5099, 5668, 6286, 6688, 6739 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 7047 |
| ApaI | GGGCCC | 1 cut(s) | 1174 |
| ApaLI | GTGCAC | 1 cut(s) | 617 |
| ApeKI | GCWGC | 9 cut(s) | 3290, 3935, 5004, 5007, 5621, 5709, 5712, 6722, 6897 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 41, 73, 2755, 2787 |
| AseI | ATTAAT | 5 cut(s) | 38, 1115, 1119, 5168, 6060 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 5460, 5793 |
| AspA2I | CCTAGG | 1 cut(s) | 2246 |
| AspLEI | GCGC | 3 cut(s) | 2156, 2918, 3935 |
| AsuC2I | CCSGG | 1 cut(s) | 2060 |
| AsuII | TTCGAA | 1 cut(s) | 665 |
| AvaII | GGWCC | 6 cut(s) | 124, 1188, 1714, 3782, 4049, 5390 |
| AvrII | CCTAGG | 1 cut(s) | 2246 |
| AxyI | CCTNAGG | 1 cut(s) | 6384 |
| BaeGI | GKGCMC | 6 cut(s) | 621, 1174, 1867, 2325, 2468, 6827 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3252, 3285 |
| BalI | TGGCCA | 1 cut(s) | 824 |
| BanI | GGYRCC | 3 cut(s) | 1367, 3034, 3468 |
| BanII | GRGCYC | 2 cut(s) | 1174, 1665 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1717, 1749, 3387, 3419 |
| BauI | CACGAG | 1 cut(s) | 1860 |
| BbsI | GAAGAC | 4 cut(s) | 2141, 3402, 4046, 6628 |
| Bbv12I | GWGCWC | 3 cut(s) | 621, 1665, 1861 |
| BbvI | GCAGC | 9 cut(s) | 3302, 3922, 4991, 4994, 5608, 5696, 5724, 6709, 6909 |
| BccI | CCATC | 8 cut(s) | 115, 1334, 1760, 1980, 2228, 5437, 6546, 6942 |
| BceAI | ACGGC | 6 cut(s) | 2411, 2446, 2719, 2908, 3363, 6909 |
| BciT130I | CCWGG | 5 cut(s) | 128, 2470, 2649, 4016, 5110 |
| BclI | TGATCA | 1 cut(s) | 936 |
| BcnI | CCSGG | 1 cut(s) | 2060 |
| BcuI | ACTAGT | 1 cut(s) | 613 |
| BfmI | CTRYAG | 3 cut(s) | 2439, 4401, 5710 |
| BfoI | RGCGCY | 1 cut(s) | 3936 |
| BfrI | CTTAAG | 2 cut(s) | 3485, 3608 |
| BfuAI | ACCTGC | 1 cut(s) | 693 |
| BglII | AGATCT | 2 cut(s) | 1393, 2831 |
| BlnI | CCTAGG | 1 cut(s) | 2246 |
| BmcAI | AGTACT | 2 cut(s) | 208, 3302 |
| Bme1390I | CCNGG | 6 cut(s) | 128, 2060, 2470, 2649, 4016, 5110 |
| Bme18I | GGWCC | 6 cut(s) | 124, 1188, 1714, 3782, 4049, 5390 |
| BmgBI | CACGTC | 1 cut(s) | 3145 |
| BmrFI | CCNGG | 6 cut(s) | 128, 2060, 2470, 2649, 4016, 5110 |
| BmrI | ACTGGG | 2 cut(s) | 139, 306 |
| BmuI | ACTGGG | 2 cut(s) | 139, 306 |
| BpiI | GAAGAC | 4 cut(s) | 2141, 3402, 4046, 6628 |
| BpmI | CTGGAG | 4 cut(s) | 2631, 3075, 6702, 6976 |
| Bpu14I | TTCGAA | 1 cut(s) | 665 |
| BpuEI | CTTGAG | 7 cut(s) | 583, 2747, 3394, 3924, 4289, 4619, 4792 |
| BpuMI | CCSGG | 1 cut(s) | 2060 |
| Bsa29I | ATCGAT | 2 cut(s) | 3682, 5148 |
| BsaBI | GATNNNNATC | 2 cut(s) | 5566, 6736 |
| BsaI | GGTCTC | 1 cut(s) | 539 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 361, 391, 2536, 2566, 4060, 4090 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 318, 1797, 2209, 2474, 3325, 3465, 6847 |
| Bse21I | CCTNAGG | 1 cut(s) | 6384 |
| Bse3DI | GCAATG | 2 cut(s) | 349, 4741 |
| Bse8I | GATNNNNATC | 2 cut(s) | 5566, 6736 |
| BseBI | CCWGG | 5 cut(s) | 128, 2470, 2649, 4016, 5110 |
| BseCI | ATCGAT | 2 cut(s) | 3682, 5148 |
| BseJI | GATNNNNATC | 2 cut(s) | 5566, 6736 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 318, 1797, 2209, 2474, 3325, 3465, 6847 |
| BseMI | GCAATG | 2 cut(s) | 349, 4741 |
| BseMII | CTCAG | 4 cut(s) | 232, 811, 1298, 3525 |
| BseRI | GAGGAG | 2 cut(s) | 1671, 3011 |
| BseSI | GKGCMC | 6 cut(s) | 621, 1174, 1867, 2325, 2468, 6827 |
| BseXI | GCAGC | 9 cut(s) | 3302, 3922, 4991, 4994, 5608, 5696, 5724, 6709, 6909 |
| BsgI | GTGCAG | 2 cut(s) | 2245, 5607 |
| Bsh1236I | CGCG | 3 cut(s) | 2154, 2222, 2916 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2515 |
| BshNI | GGYRCC | 3 cut(s) | 1367, 3034, 3468 |
| BshVI | ATCGAT | 2 cut(s) | 3682, 5148 |
| BsiEI | CGRYCG | 1 cut(s) | 2515 |
| BsiHKAI | GWGCWC | 3 cut(s) | 621, 1665, 1861 |
| BsiSI | CCGG | 2 cut(s) | 1717, 2059 |
| BsiWI | CGTACG | 1 cut(s) | 1733 |
| BslFI | GGGAC | 2 cut(s) | 3132, 5841 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 318, 1797, 2209, 2474, 3325, 3465, 6847 |
| BsmBI | CGTCTC | 1 cut(s) | 4613 |
| BsmFI | GGGAC | 2 cut(s) | 3132, 5841 |
| BsmI | GAATGC | 7 cut(s) | 732, 971, 1525, 2450, 4661, 5133, 7070 |
| Bso31I | GGTCTC | 1 cut(s) | 539 |
| Bsp119I | TTCGAA | 1 cut(s) | 665 |
| Bsp120I | GGGCCC | 1 cut(s) | 1170 |
| Bsp1286I | GDGCHC | 8 cut(s) | 621, 1174, 1665, 1861, 1867, 2325, 2468, 6827 |
| Bsp1407I | TGTACA | 1 cut(s) | 6874 |
| Bsp19I | CCATGG | 4 cut(s) | 750, 778, 2519, 2711 |
| BspACI | CCGC | 4 cut(s) | 181, 2220, 2921, 3725 |
| BspCNI | CTCAG | 4 cut(s) | 231, 810, 1297, 3526 |
| BspDI | ATCGAT | 2 cut(s) | 3682, 5148 |
| BspFNI | CGCG | 3 cut(s) | 2154, 2222, 2916 |
| BspHI | TCATGA | 3 cut(s) | 246, 2305, 5142 |
| BspMAI | CTGCAG | 1 cut(s) | 5714 |
| BspMI | ACCTGC | 1 cut(s) | 693 |
| BspPI | GGATC | 9 cut(s) | 1089, 1779, 1850, 2096, 5099, 5668, 6286, 6688, 6739 |
| BspQI | GCTCTTC | 1 cut(s) | 465 |
| BspT104I | TTCGAA | 1 cut(s) | 665 |
| BspT107I | GGYRCC | 3 cut(s) | 1367, 3034, 3468 |
| BspTI | CTTAAG | 2 cut(s) | 3485, 3608 |
| BspTNI | GGTCTC | 1 cut(s) | 539 |
| BsrDI | GCAATG | 2 cut(s) | 349, 4741 |
| BsrGI | TGTACA | 1 cut(s) | 6874 |
| BssNAI | GTATAC | 1 cut(s) | 4111 |
| BssSI | CACGAG | 1 cut(s) | 1860 |
| Bst1107I | GTATAC | 1 cut(s) | 4111 |
| Bst2BI | CACGAG | 1 cut(s) | 1860 |
| Bst2UI | CCWGG | 5 cut(s) | 128, 2470, 2649, 4016, 5110 |
| Bst4CI | ACNGT | 8 cut(s) | 189, 689, 1888, 3501, 4045, 4108, 4477, 7049 |
| Bst6I | CTCTTC | 6 cut(s) | 465, 1339, 1530, 2059, 4427, 5604 |
| BstAFI | CTTAAG | 2 cut(s) | 3485, 3608 |
| BstAUI | TGTACA | 1 cut(s) | 6874 |
| BstBI | TTCGAA | 1 cut(s) | 665 |
| BstC8I | GCNNGC | 5 cut(s) | 1525, 2195, 2224, 6902, 6931 |
| BstDSI | CCRYGG | 4 cut(s) | 750, 778, 2519, 2711 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2207 |
| BstFNI | CGCG | 3 cut(s) | 2154, 2222, 2916 |
| BstH2I | RGCGCY | 1 cut(s) | 3936 |
| BstHHI | GCGC | 3 cut(s) | 2156, 2918, 3935 |
| BstMCI | CGRYCG | 1 cut(s) | 2515 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 408, 1381, 2160, 3107, 4094, 4199, 5406, 6930 |
| BstNI | CCWGG | 5 cut(s) | 128, 2470, 2649, 4016, 5110 |
| BstSCI | CCNGG | 6 cut(s) | 126, 2058, 2468, 2647, 4014, 5108 |
| BstSFI | CTRYAG | 3 cut(s) | 2439, 4401, 5710 |
| BstSLI | GKGCMC | 6 cut(s) | 621, 1174, 1867, 2325, 2468, 6827 |
| BstUI | CGCG | 3 cut(s) | 2154, 2222, 2916 |
| BstV1I | GCAGC | 9 cut(s) | 3302, 3922, 4991, 4994, 5608, 5696, 5724, 6709, 6909 |
| BstV2I | GAAGAC | 4 cut(s) | 2141, 3402, 4046, 6628 |
| BstX2I | RGATCY | 4 cut(s) | 1393, 2831, 5673, 6731 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1378, 3057 |
| BstYI | RGATCY | 4 cut(s) | 1393, 2831, 5673, 6731 |
| BstZ17I | GTATAC | 1 cut(s) | 4111 |
| Bsu15I | ATCGAT | 2 cut(s) | 3682, 5148 |
| Bsu36I | CCTNAGG | 1 cut(s) | 6384 |
| BsuTUI | ATCGAT | 2 cut(s) | 3682, 5148 |
| BtgI | CCRYGG | 4 cut(s) | 750, 778, 2519, 2711 |
| BtrI | CACGTC | 1 cut(s) | 3145 |
| BtsI | GCAGTG | 1 cut(s) | 1054 |
| BtsIMutI | CAGTG | 6 cut(s) | 1054, 1088, 2077, 3198, 4233, 5257 |
| BveI | ACCTGC | 1 cut(s) | 693 |
| Cac8I | GCNNGC | 5 cut(s) | 1525, 2195, 2224, 6902, 6931 |
| CaiI | CAGNNNCTG | 1 cut(s) | 7047 |
| CciI | TCATGA | 3 cut(s) | 246, 2305, 5142 |
| CfoI | GCGC | 3 cut(s) | 2156, 2918, 3935 |
| ClaI | ATCGAT | 2 cut(s) | 3682, 5148 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 157, 192 |
| DraI | TTTAAA | 3 cut(s) | 3307, 4996, 6184 |
| EaeI | YGGCCR | 1 cut(s) | 822 |
| Eam1104I | CTCTTC | 6 cut(s) | 465, 1339, 1530, 2059, 4427, 5604 |
| EarI | CTCTTC | 6 cut(s) | 465, 1339, 1530, 2059, 4427, 5604 |
| Ecl136II | GAGCTC | 1 cut(s) | 1663 |
| Eco147I | AGGCCT | 1 cut(s) | 6943 |
| Eco24I | GRGCYC | 2 cut(s) | 1174, 1665 |
| Eco31I | GGTCTC | 1 cut(s) | 539 |
| Eco32I | GATATC | 2 cut(s) | 224, 2778 |
| Eco47I | GGWCC | 6 cut(s) | 124, 1188, 1714, 3782, 4049, 5390 |
| Eco53kI | GAGCTC | 1 cut(s) | 1663 |
| Eco57I | CTGAAG | 2 cut(s) | 1741, 5808 |
| Eco81I | CCTNAGG | 1 cut(s) | 6384 |
| EcoICRI | GAGCTC | 1 cut(s) | 1663 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2207 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1170, 3782 |
| EcoRI | GAATTC | 4 cut(s) | 104, 4553, 5023, 5267 |
| EcoRII | CCWGG | 5 cut(s) | 126, 2468, 2647, 4014, 5108 |
| EcoRV | GATATC | 2 cut(s) | 224, 2778 |
| EcoT22I | ATGCAT | 7 cut(s) | 1525, 1831, 2121, 2452, 3574, 4090, 6757 |
| EcoT38I | GRGCYC | 2 cut(s) | 1174, 1665 |
| Esp3I | CGTCTC | 1 cut(s) | 4613 |
| FaqI | GGGAC | 2 cut(s) | 3132, 5841 |
| FauNDI | CATATG | 6 cut(s) | 2158, 2412, 2633, 3574, 4748, 5204 |
| FbaI | TGATCA | 1 cut(s) | 936 |
| FblI | GTMKAC | 6 cut(s) | 610, 2515, 2802, 4110, 6588, 6861 |
| FriOI | GRGCYC | 2 cut(s) | 1174, 1665 |
| GlaI | GCGC | 3 cut(s) | 2155, 2917, 3934 |
| GsuI | CTGGAG | 4 cut(s) | 2631, 3075, 6702, 6976 |
| HaeII | RGCGCY | 1 cut(s) | 3936 |
| HapII | CCGG | 2 cut(s) | 1717, 2059 |
| HhaI | GCGC | 3 cut(s) | 2156, 2918, 3935 |
| Hin6I | GCGC | 3 cut(s) | 2154, 2916, 3933 |
| HinP1I | GCGC | 3 cut(s) | 2154, 2916, 3933 |
| HincII | GTYRAC | 4 cut(s) | 595, 2434, 2516, 3027 |
| HindII | GTYRAC | 4 cut(s) | 595, 2434, 2516, 3027 |
| HindIII | AAGCTT | 2 cut(s) | 478, 1373 |
| HpaI | GTTAAC | 1 cut(s) | 3027 |
| HpaII | CCGG | 2 cut(s) | 1717, 2059 |
| Hpy99I | CGWCG | 1 cut(s) | 1741 |
| HpyCH4III | ACNGT | 8 cut(s) | 189, 689, 1888, 3501, 4045, 4108, 4477, 7049 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 408, 1381, 2160, 3107, 4094, 4199, 5406, 6930 |
| HspAI | GCGC | 3 cut(s) | 2154, 2916, 3933 |
| Ksp22I | TGATCA | 1 cut(s) | 936 |
| KspAI | GTTAAC | 1 cut(s) | 3027 |
| LguI | GCTCTTC | 1 cut(s) | 465 |
| Lsp1109I | GCAGC | 9 cut(s) | 3302, 3922, 4991, 4994, 5608, 5696, 5724, 6709, 6909 |
| MfeI | CAATTG | 5 cut(s) | 2742, 3182, 4122, 4256, 6390 |
| MflI | RGATCY | 4 cut(s) | 1393, 2831, 5673, 6731 |
| MhlI | GDGCHC | 8 cut(s) | 621, 1174, 1665, 1861, 1867, 2325, 2468, 6827 |
| MlsI | TGGCCA | 1 cut(s) | 824 |
| MluNI | TGGCCA | 1 cut(s) | 824 |
| MlyI | GAGTC | 7 cut(s) | 590, 824, 2078, 2638, 3425, 6218, 6256 |
| MmeI | TCCRAC | 8 cut(s) | 372, 1638, 1719, 4027, 4035, 4942, 6376, 6721 |
| Mox20I | TGGCCA | 1 cut(s) | 824 |
| Mph1103I | ATGCAT | 7 cut(s) | 1525, 1831, 2121, 2452, 3574, 4090, 6757 |
| MroXI | GAANNNNTTC | 2 cut(s) | 5460, 5793 |
| MscI | TGGCCA | 1 cut(s) | 824 |
| Msp20I | TGGCCA | 1 cut(s) | 824 |
| MspA1I | CMGCKG | 1 cut(s) | 6722 |
| MspCI | CTTAAG | 2 cut(s) | 3485, 3608 |
| MspI | CCGG | 2 cut(s) | 1717, 2059 |
| MspR9I | CCNGG | 6 cut(s) | 128, 2060, 2470, 2649, 4016, 5110 |
| MunI | CAATTG | 5 cut(s) | 2742, 3182, 4122, 4256, 6390 |
| Mva1269I | GAATGC | 7 cut(s) | 732, 971, 1525, 2450, 4661, 5133, 7070 |
| MvaI | CCWGG | 5 cut(s) | 128, 2470, 2649, 4016, 5110 |
| MvnI | CGCG | 3 cut(s) | 2154, 2222, 2916 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 408, 1381, 2160, 3107, 4094, 4199, 5406, 6930 |
| NciI | CCSGG | 1 cut(s) | 2060 |
| NcoI | CCATGG | 4 cut(s) | 750, 778, 2519, 2711 |
| NdeI | CATATG | 6 cut(s) | 2158, 2412, 2633, 3574, 4748, 5204 |
| NmeAIII | GCCGAG | 1 cut(s) | 6259 |
| NmuCI | GTSAC | 8 cut(s) | 183, 1003, 2761, 2813, 3560, 3581, 3952, 6565 |
| NsiI | ATGCAT | 7 cut(s) | 1525, 1831, 2121, 2452, 3574, 4090, 6757 |
| NspV | TTCGAA | 1 cut(s) | 665 |
| OliI | CACNNNNGTG | 4 cut(s) | 2923, 3474, 4496, 4498 |
| PacI | TTAATTAA | 1 cut(s) | 1119 |
| PaeI | GCATGC | 1 cut(s) | 1527 |
| PagI | TCATGA | 3 cut(s) | 246, 2305, 5142 |
| PceI | AGGCCT | 1 cut(s) | 6943 |
| PciI | ACATGT | 8 cut(s) | 673, 1606, 1653, 4495, 4559, 5158, 5821, 6531 |
| PciSI | GCTCTTC | 1 cut(s) | 465 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1133 |
| PctI | GAATGC | 7 cut(s) | 732, 971, 1525, 2450, 4661, 5133, 7070 |
| PdmI | GAANNNNTTC | 2 cut(s) | 5460, 5793 |
| Pfl23II | CGTACG | 1 cut(s) | 1733 |
| PflFI | GACNNNGTC | 2 cut(s) | 375, 722 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 318, 6847 |
| PfoI | TCCNGGA | 1 cut(s) | 2647 |
| PleI | GAGTC | 7 cut(s) | 590, 823, 2077, 2638, 3424, 6217, 6255 |
| PpsI | GAGTC | 7 cut(s) | 590, 823, 2077, 2638, 3424, 6217, 6255 |
| PpuMI | RGGWCCY | 1 cut(s) | 3782 |
| PscI | ACATGT | 8 cut(s) | 673, 1606, 1653, 4495, 4559, 5158, 5821, 6531 |
| PshBI | ATTAAT | 5 cut(s) | 38, 1115, 1119, 5168, 6060 |
| PsiI | TTATAA | 4 cut(s) | 3272, 5199, 5960, 7147 |
| Psp124BI | GAGCTC | 1 cut(s) | 1665 |
| Psp1406I | AACGTT | 4 cut(s) | 574, 649, 2615, 4394 |
| Psp5II | RGGWCCY | 1 cut(s) | 3782 |
| Psp6I | CCWGG | 5 cut(s) | 126, 2468, 2647, 4014, 5108 |
| PspGI | CCWGG | 5 cut(s) | 126, 2468, 2647, 4014, 5108 |
| PspLI | CGTACG | 1 cut(s) | 1733 |
| PspOMI | GGGCCC | 1 cut(s) | 1170 |
| PspPPI | RGGWCCY | 1 cut(s) | 3782 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 6280, 6312 |
| PstI | CTGCAG | 1 cut(s) | 5714 |
| PstNI | CAGNNNCTG | 1 cut(s) | 7047 |
| PsuI | RGATCY | 4 cut(s) | 1393, 2831, 5673, 6731 |
| PsyI | GACNNNGTC | 2 cut(s) | 375, 722 |
| PvuII | CAGCTG | 1 cut(s) | 6722 |
| SacI | GAGCTC | 1 cut(s) | 1665 |
| SalI | GTCGAC | 1 cut(s) | 2514 |
| SapI | GCTCTTC | 1 cut(s) | 465 |
| ScaI | AGTACT | 2 cut(s) | 208, 3302 |
| SchI | GAGTC | 7 cut(s) | 590, 824, 2078, 2638, 3425, 6218, 6256 |
| ScrFI | CCNGG | 6 cut(s) | 128, 2060, 2470, 2649, 4016, 5110 |
| SduI | GDGCHC | 8 cut(s) | 621, 1174, 1665, 1861, 1867, 2325, 2468, 6827 |
| SfcI | CTRYAG | 3 cut(s) | 2439, 4401, 5710 |
| SfuI | TTCGAA | 1 cut(s) | 665 |
| SinI | GGWCC | 6 cut(s) | 124, 1188, 1714, 3782, 4049, 5390 |
| SmlI | CTYRAG | 9 cut(s) | 598, 2726, 3373, 3485, 3608, 3939, 4268, 4598, 4771 |
| SmoI | CTYRAG | 9 cut(s) | 598, 2726, 3373, 3485, 3608, 3939, 4268, 4598, 4771 |
| SpeI | ACTAGT | 1 cut(s) | 613 |
| SphI | GCATGC | 1 cut(s) | 1527 |
| SseBI | AGGCCT | 1 cut(s) | 6943 |
| SsiI | CCGC | 4 cut(s) | 181, 2220, 2921, 3725 |
| SspI | AATATT | 5 cut(s) | 256, 893, 1565, 2952, 5298 |
| SstI | GAGCTC | 1 cut(s) | 1665 |
| StuI | AGGCCT | 1 cut(s) | 6943 |
| StyD4I | CCNGG | 6 cut(s) | 126, 2058, 2468, 2647, 4014, 5108 |
| TaaI | ACNGT | 8 cut(s) | 189, 689, 1888, 3501, 4045, 4108, 4477, 7049 |
| TaqII | GACCGA | 1 cut(s) | 2501 |
| TatI | WGTACW | 6 cut(s) | 206, 636, 3300, 3866, 4103, 6874 |
| TauI | GCSGC | 1 cut(s) | 3727 |
| TscAI | CASTG | 6 cut(s) | 1061, 1095, 2084, 3205, 4240, 5257 |
| TseFI | GTSAC | 8 cut(s) | 183, 1003, 2761, 2813, 3560, 3581, 3952, 6565 |
| TseI | GCWGC | 9 cut(s) | 3290, 3935, 5004, 5007, 5621, 5709, 5712, 6722, 6897 |
| Tsp45I | GTSAC | 8 cut(s) | 183, 1003, 2761, 2813, 3560, 3581, 3952, 6565 |
| TspGWI | ACGGA | 2 cut(s) | 2027, 3139 |
| TspRI | CASTG | 6 cut(s) | 1061, 1095, 2084, 3205, 4240, 5257 |
| Tth111I | GACNNNGTC | 2 cut(s) | 375, 722 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 318, 6847 |
| Vha464I | CTTAAG | 2 cut(s) | 3485, 3608 |
| VneI | GTGCAC | 1 cut(s) | 617 |
| VpaK11BI | GGWCC | 6 cut(s) | 124, 1188, 1714, 3782, 4049, 5390 |
| VspI | ATTAAT | 5 cut(s) | 38, 1115, 1119, 5168, 6060 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2207 |
| XbaI | TCTAGA | 4 cut(s) | 5176, 5558, 5602, 6766 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 757 |
| XmaJI | CCTAGG | 1 cut(s) | 2246 |
| XmiI | GTMKAC | 6 cut(s) | 610, 2515, 2802, 4110, 6588, 6861 |
| XmnI | GAANNNNTTC | 2 cut(s) | 5460, 5793 |
| ZrmI | AGTACT | 2 cut(s) | 208, 3302 |
| Zsp2I | ATGCAT | 7 cut(s) | 1525, 1831, 2121, 2452, 3574, 4090, 6757 |