protein kinase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotrans_gag | PF03732 | 82 - 176 | 2.8e-20 | Retrotransposon gag protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 891 |
| Acc36I | ACCTGC | 1 cut(s) | 2128 |
| Acc65I | GGTACC | 1 cut(s) | 1547 |
| AccB1I | GGYRCC | 2 cut(s) | 218, 1547 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 282, 1204 |
| AccBSI | CCGCTC | 2 cut(s) | 41, 1302 |
| AccI | GTMKAC | 2 cut(s) | 432, 1687 |
| AccII | CGCG | 2 cut(s) | 486, 1406 |
| AclWI | GGATC | 8 cut(s) | 155, 571, 926, 1925, 1938, 2045, 2071, 2097 |
| AcsI | RAATTY | 1 cut(s) | 137 |
| AcuI | CTGAAG | 2 cut(s) | 1093, 1349 |
| AcyI | GRCGYC | 2 cut(s) | 219, 2322 |
| AdeI | CACNNNGTG | 1 cut(s) | 2429 |
| AfaI | GTAC | 5 cut(s) | 353, 1049, 1549, 1803, 2175 |
| AflII | CTTAAG | 1 cut(s) | 1925 |
| AjiI | CACGTC | 1 cut(s) | 396 |
| AjnI | CCWGG | 2 cut(s) | 1243, 1933 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 269, 301 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 30, 62 |
| Alw21I | GWGCWC | 1 cut(s) | 1679 |
| Alw26I | GTCTC | 4 cut(s) | 1578, 1877, 2043, 2323 |
| AlwI | GGATC | 8 cut(s) | 155, 571, 926, 1925, 1938, 2045, 2071, 2097 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 557, 2215 |
| AoxI | GGCC | 9 cut(s) | 304, 517, 862, 924, 1019, 1027, 1043, 1072, 1195 |
| ApoI | RAATTY | 1 cut(s) | 137 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1120, 1152 |
| AseI | ATTAAT | 2 cut(s) | 2010, 2304 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 248, 339, 1645, 1942 |
| Asp718I | GGTACC | 1 cut(s) | 1547 |
| AspA2I | CCTAGG | 2 cut(s) | 212, 1040 |
| AspLEI | GCGC | 3 cut(s) | 221, 488, 1408 |
| AspS9I | GGNCC | 4 cut(s) | 517, 924, 1195, 2247 |
| AsuHPI | GGTGA | 5 cut(s) | 1311, 1382, 1699, 1774, 2138 |
| AsuII | TTCGAA | 1 cut(s) | 1756 |
| AvaII | GGWCC | 1 cut(s) | 2247 |
| AvrII | CCTAGG | 2 cut(s) | 212, 1040 |
| BaeGI | GKGCMC | 1 cut(s) | 997 |
| BamHI | GGATCC | 1 cut(s) | 1930 |
| BanI | GGYRCC | 2 cut(s) | 218, 1547 |
| BanII | GRGCYC | 1 cut(s) | 1612 |
| BbsI | GAAGAC | 4 cut(s) | 843, 1648, 1852, 2230 |
| Bbv12I | GWGCWC | 1 cut(s) | 1679 |
| BccI | CCATC | 4 cut(s) | 29, 565, 1186, 2285 |
| BceAI | ACGGC | 4 cut(s) | 278, 1030, 1034, 1370 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 671, 705 |
| BciT130I | CCWGG | 2 cut(s) | 1245, 1935 |
| BcoDI | GTCTC | 4 cut(s) | 1578, 1877, 2043, 2323 |
| BfaI | CTAG | 6 cut(s) | 213, 687, 1041, 1997, 2042, 2219 |
| BfmI | CTRYAG | 3 cut(s) | 75, 81, 2160 |
| BfoI | RGCGCY | 1 cut(s) | 222 |
| BfrI | CTTAAG | 1 cut(s) | 1925 |
| BfuAI | ACCTGC | 1 cut(s) | 2128 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 870 |
| BglII | AGATCT | 1 cut(s) | 1104 |
| BlnI | CCTAGG | 2 cut(s) | 212, 1040 |
| BlpI | GCTNAGC | 1 cut(s) | 1569 |
| BmcAI | AGTACT | 1 cut(s) | 353 |
| Bme1390I | CCNGG | 2 cut(s) | 1245, 1935 |
| Bme18I | GGWCC | 1 cut(s) | 2247 |
| BmgBI | CACGTC | 1 cut(s) | 396 |
| BmgT120I | GGNCC | 4 cut(s) | 517, 924, 1195, 2247 |
| BmiI | GGNNCC | 3 cut(s) | 220, 1549, 1932 |
| BmrFI | CCNGG | 2 cut(s) | 1245, 1935 |
| BmsI | GCATC | 6 cut(s) | 318, 1372, 1651, 1902, 1977, 2380 |
| BoxI | GACNNNNGTC | 1 cut(s) | 799 |
| BpiI | GAAGAC | 4 cut(s) | 843, 1648, 1852, 2230 |
| BpmI | CTGGAG | 1 cut(s) | 579 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1569 |
| Bpu14I | TTCGAA | 1 cut(s) | 1756 |
| BpuEI | CTTGAG | 3 cut(s) | 284, 1008, 1634 |
| Bsa29I | ATCGAT | 2 cut(s) | 2092, 2256 |
| BsaAI | YACGTR | 1 cut(s) | 110 |
| BsaBI | GATNNNNATC | 1 cut(s) | 165 |
| BsaHI | GRCGYC | 2 cut(s) | 219, 2322 |
| BsaI | GGTCTC | 1 cut(s) | 1877 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 30, 60, 380, 410 |
| Bse1I | ACTGG | 4 cut(s) | 53, 1351, 1952, 2181 |
| Bse3DI | GCAATG | 2 cut(s) | 1170, 2439 |
| Bse8I | GATNNNNATC | 1 cut(s) | 165 |
| BseBI | CCWGG | 2 cut(s) | 1245, 1935 |
| BseCI | ATCGAT | 2 cut(s) | 2092, 2256 |
| BseGI | GGATG | 7 cut(s) | 415, 421, 1753, 1773, 2131, 2332, 2392 |
| BseJI | GATNNNNATC | 1 cut(s) | 165 |
| BseMI | GCAATG | 2 cut(s) | 1170, 2439 |
| BseMII | CTCAG | 1 cut(s) | 564 |
| BseNI | ACTGG | 4 cut(s) | 53, 1351, 1952, 2181 |
| BseRI | GAGGAG | 1 cut(s) | 2201 |
| BseSI | GKGCMC | 1 cut(s) | 997 |
| BseYI | CCCAGC | 1 cut(s) | 2264 |
| BsgI | GTGCAG | 2 cut(s) | 802, 2156 |
| Bsh1236I | CGCG | 2 cut(s) | 486, 1406 |
| BshFI | GGCC | 9 cut(s) | 306, 519, 864, 926, 1021, 1029, 1045, 1074, 1197 |
| BshNI | GGYRCC | 2 cut(s) | 218, 1547 |
| BshVI | ATCGAT | 2 cut(s) | 2092, 2256 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1679 |
| BslFI | GGGAC | 2 cut(s) | 807, 1528 |
| BsmAI | GTCTC | 4 cut(s) | 1578, 1877, 2043, 2323 |
| BsmFI | GGGAC | 2 cut(s) | 807, 1528 |
| BsmI | GAATGC | 3 cut(s) | 480, 1420, 1492 |
| BsnI | GGCC | 9 cut(s) | 306, 519, 864, 926, 1021, 1029, 1045, 1074, 1197 |
| Bso31I | GGTCTC | 1 cut(s) | 1877 |
| Bsp119I | TTCGAA | 1 cut(s) | 1756 |
| Bsp1286I | GDGCHC | 3 cut(s) | 997, 1612, 1679 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1569 |
| Bsp19I | CCATGG | 4 cut(s) | 475, 880, 1057, 1632 |
| BspANI | GGCC | 9 cut(s) | 306, 519, 864, 926, 1021, 1029, 1045, 1074, 1197 |
| BspCNI | CTCAG | 1 cut(s) | 563 |
| BspDI | ATCGAT | 2 cut(s) | 2092, 2256 |
| BspFNI | CGCG | 2 cut(s) | 486, 1406 |
| BspHI | TCATGA | 1 cut(s) | 2232 |
| BspLI | GGNNCC | 3 cut(s) | 220, 1549, 1932 |
| BspMAI | CTGCAG | 3 cut(s) | 79, 85, 2164 |
| BspMI | ACCTGC | 1 cut(s) | 2128 |
| BspPI | GGATC | 8 cut(s) | 155, 571, 926, 1925, 1938, 2045, 2071, 2097 |
| BspT104I | TTCGAA | 1 cut(s) | 1756 |
| BspT107I | GGYRCC | 2 cut(s) | 218, 1547 |
| BspTI | CTTAAG | 1 cut(s) | 1925 |
| BspTNI | GGTCTC | 1 cut(s) | 1877 |
| BsrBI | CCGCTC | 2 cut(s) | 41, 1302 |
| BsrDI | GCAATG | 2 cut(s) | 1170, 2439 |
| BsrI | ACTGG | 4 cut(s) | 53, 1351, 1952, 2181 |
| BssNAI | GTATAC | 1 cut(s) | 1688 |
| BssNI | GRCGYC | 2 cut(s) | 219, 2322 |
| Bst1107I | GTATAC | 1 cut(s) | 1688 |
| Bst2UI | CCWGG | 2 cut(s) | 1245, 1935 |
| Bst4CI | ACNGT | 3 cut(s) | 1134, 1155, 1888 |
| Bst6I | CTCTTC | 2 cut(s) | 330, 572 |
| BstACI | GRCGYC | 2 cut(s) | 219, 2322 |
| BstAFI | CTTAAG | 1 cut(s) | 1925 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 458, 2429 |
| BstBAI | YACGTR | 1 cut(s) | 110 |
| BstBI | TTCGAA | 1 cut(s) | 1756 |
| BstC8I | GCNNGC | 7 cut(s) | 300, 304, 1076, 1566, 1718, 1722, 2359 |
| BstDEI | CTNAG | 5 cut(s) | 11, 550, 787, 1266, 1569 |
| BstDSI | CCRYGG | 4 cut(s) | 475, 880, 1057, 1632 |
| BstEII | GGTNACC | 1 cut(s) | 1061 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 749, 2135 |
| BstF5I | GGATG | 7 cut(s) | 415, 421, 1753, 1773, 2131, 2332, 2392 |
| BstFNI | CGCG | 2 cut(s) | 486, 1406 |
| BstH2I | RGCGCY | 1 cut(s) | 222 |
| BstHHI | GCGC | 3 cut(s) | 221, 488, 1408 |
| BstMAI | GTCTC | 4 cut(s) | 1578, 1877, 2043, 2323 |
| BstNI | CCWGG | 2 cut(s) | 1245, 1935 |
| BstNSI | RCATGY | 3 cut(s) | 800, 1039, 1448 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 799 |
| BstPI | GGTNACC | 1 cut(s) | 1061 |
| BstSCI | CCNGG | 2 cut(s) | 1243, 1933 |
| BstSFI | CTRYAG | 3 cut(s) | 75, 81, 2160 |
| BstSLI | GKGCMC | 1 cut(s) | 997 |
| BstUI | CGCG | 2 cut(s) | 486, 1406 |
| BstV2I | GAAGAC | 4 cut(s) | 843, 1648, 1852, 2230 |
| BstX2I | RGATCY | 3 cut(s) | 160, 1104, 1930 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 604, 1058, 1082 |
| BstYI | RGATCY | 3 cut(s) | 160, 1104, 1930 |
| BstZ17I | GTATAC | 1 cut(s) | 1688 |
| Bsu15I | ATCGAT | 2 cut(s) | 2092, 2256 |
| BsuRI | GGCC | 9 cut(s) | 306, 519, 864, 926, 1021, 1029, 1045, 1074, 1197 |
| BsuTUI | ATCGAT | 2 cut(s) | 2092, 2256 |
| BtgI | CCRYGG | 4 cut(s) | 475, 880, 1057, 1632 |
| BtrI | CACGTC | 1 cut(s) | 396 |
| BtsCI | GGATG | 7 cut(s) | 415, 421, 1753, 1773, 2131, 2332, 2392 |
| BtsIMutI | CAGTG | 3 cut(s) | 60, 815, 1344 |
| BveI | ACCTGC | 1 cut(s) | 2128 |
| Cac8I | GCNNGC | 7 cut(s) | 300, 304, 1076, 1566, 1718, 1722, 2359 |
| CaiI | CAGNNNCTG | 2 cut(s) | 557, 2215 |
| CciI | TCATGA | 1 cut(s) | 2232 |
| CfoI | GCGC | 3 cut(s) | 221, 488, 1408 |
| Cfr13I | GGNCC | 4 cut(s) | 517, 924, 1195, 2247 |
| ClaI | ATCGAT | 2 cut(s) | 2092, 2256 |
| CseI | GACGC | 3 cut(s) | 450, 789, 2330 |
| Csp6I | GTAC | 5 cut(s) | 352, 1048, 1548, 1802, 2174 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1333, 1368 |
| CviQI | GTAC | 5 cut(s) | 352, 1048, 1548, 1802, 2174 |
| DdeI | CTNAG | 5 cut(s) | 11, 550, 787, 1266, 1569 |
| DinI | GGCGCC | 1 cut(s) | 220 |
| DraIII | CACNNNGTG | 1 cut(s) | 2429 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 891 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 891 |
| Eam1104I | CTCTTC | 2 cut(s) | 330, 572 |
| EarI | CTCTTC | 2 cut(s) | 330, 572 |
| EciI | GGCGGA | 2 cut(s) | 1882, 2102 |
| Eco24I | GRGCYC | 1 cut(s) | 1612 |
| Eco31I | GGTCTC | 1 cut(s) | 1877 |
| Eco47I | GGWCC | 1 cut(s) | 2247 |
| Eco57I | CTGAAG | 2 cut(s) | 1093, 1349 |
| Eco91I | GGTNACC | 1 cut(s) | 1061 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 749, 2135 |
| EcoO109I | RGGNCCY | 1 cut(s) | 517 |
| EcoO65I | GGTNACC | 1 cut(s) | 1061 |
| EcoRII | CCWGG | 2 cut(s) | 1243, 1933 |
| EcoT38I | GRGCYC | 1 cut(s) | 1612 |
| EgeI | GGCGCC | 1 cut(s) | 220 |
| EheI | GGCGCC | 1 cut(s) | 220 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1571, 1603, 1974, 2006 |
| FaqI | GGGAC | 2 cut(s) | 807, 1528 |
| FauI | CCCGC | 1 cut(s) | 79 |
| FauNDI | CATATG | 1 cut(s) | 1009 |
| FblI | GTMKAC | 2 cut(s) | 432, 1687 |
| FokI | GGATG | 7 cut(s) | 422, 428, 1760, 1760, 2138, 2319, 2399 |
| FriOI | GRGCYC | 1 cut(s) | 1612 |
| FspBI | CTAG | 6 cut(s) | 213, 687, 1041, 1997, 2042, 2219 |
| GlaI | GCGC | 3 cut(s) | 220, 487, 1407 |
| GsaI | CCCAGC | 1 cut(s) | 2268 |
| GsuI | CTGGAG | 1 cut(s) | 579 |
| HaeII | RGCGCY | 1 cut(s) | 222 |
| HaeIII | GGCC | 9 cut(s) | 306, 519, 864, 926, 1021, 1029, 1045, 1074, 1197 |
| HgaI | GACGC | 3 cut(s) | 450, 789, 2330 |
| HhaI | GCGC | 3 cut(s) | 221, 488, 1408 |
| Hin1I | GRCGYC | 2 cut(s) | 219, 2322 |
| Hin6I | GCGC | 3 cut(s) | 219, 486, 1406 |
| HinP1I | GCGC | 3 cut(s) | 219, 486, 1406 |
| HincII | GTYRAC | 4 cut(s) | 661, 726, 896, 1771 |
| HindII | GTYRAC | 4 cut(s) | 661, 726, 896, 1771 |
| HindIII | AAGCTT | 2 cut(s) | 1922, 1939 |
| HphI | GGTGA | 5 cut(s) | 1311, 1382, 1699, 1774, 2138 |
| Hpy188I | TCNGA | 5 cut(s) | 404, 805, 1191, 1329, 1732 |
| Hpy99I | CGWCG | 3 cut(s) | 400, 1736, 2324 |
| HpyAV | CCTTC | 7 cut(s) | 238, 369, 530, 1631, 1702, 1819, 2239 |
| HpyCH4III | ACNGT | 3 cut(s) | 1134, 1155, 1888 |
| HpyCH4IV | ACGT | 7 cut(s) | 109, 395, 535, 840, 901, 1702, 2070 |
| HpyF3I | CTNAG | 5 cut(s) | 11, 550, 787, 1266, 1569 |
| HpySE526I | ACGT | 7 cut(s) | 109, 395, 535, 840, 901, 1702, 2070 |
| Hsp92I | GRCGYC | 2 cut(s) | 219, 2322 |
| HspAI | GCGC | 3 cut(s) | 219, 486, 1406 |
| KasI | GGCGCC | 1 cut(s) | 218 |
| KpnI | GGTACC | 1 cut(s) | 1551 |
| LmnI | GCTCC | 4 cut(s) | 38, 1299, 1499, 1828 |
| LweI | GCATC | 6 cut(s) | 318, 1372, 1651, 1902, 1977, 2380 |
| MaeI | CTAG | 6 cut(s) | 213, 687, 1041, 1997, 2042, 2219 |
| MaeII | ACGT | 7 cut(s) | 109, 395, 535, 840, 901, 1702, 2070 |
| MaeIII | GTNAC | 4 cut(s) | 197, 370, 1061, 1291 |
| MbiI | CCGCTC | 2 cut(s) | 41, 1302 |
| MfeI | CAATTG | 1 cut(s) | 2081 |
| MflI | RGATCY | 3 cut(s) | 160, 1104, 1930 |
| MhlI | GDGCHC | 3 cut(s) | 997, 1612, 1679 |
| Mly113I | GGCGCC | 1 cut(s) | 219 |
| MlyI | GAGTC | 6 cut(s) | 378, 542, 666, 1012, 2198, 2405 |
| MmeI | TCCRAC | 7 cut(s) | 585, 926, 1182, 1185, 1725, 1755, 1764 |
| MroXI | GAANNNNTTC | 4 cut(s) | 248, 339, 1645, 1942 |
| MseI | TTAA | 6 cut(s) | 1281, 1794, 1926, 2010, 2142, 2304 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2337 |
| MspA1I | CMGCKG | 4 cut(s) | 74, 80, 95, 554 |
| MspCI | CTTAAG | 1 cut(s) | 1925 |
| MspR9I | CCNGG | 2 cut(s) | 1245, 1935 |
| MunI | CAATTG | 1 cut(s) | 2081 |
| Mva1269I | GAATGC | 3 cut(s) | 480, 1420, 1492 |
| MvaI | CCWGG | 2 cut(s) | 1245, 1935 |
| MvnI | CGCG | 2 cut(s) | 486, 1406 |
| NarI | GGCGCC | 1 cut(s) | 219 |
| NcoI | CCATGG | 4 cut(s) | 475, 880, 1057, 1632 |
| NdeI | CATATG | 1 cut(s) | 1009 |
| NlaIV | GGNNCC | 3 cut(s) | 220, 1549, 1932 |
| NmeAIII | GCCGAG | 6 cut(s) | 1459, 1516, 1599, 1698, 2395, 2419 |
| NmuCI | GTSAC | 3 cut(s) | 197, 370, 1291 |
| NspI | RCATGY | 3 cut(s) | 800, 1039, 1448 |
| NspV | TTCGAA | 1 cut(s) | 1756 |
| PagI | TCATGA | 1 cut(s) | 2232 |
| PctI | GAATGC | 3 cut(s) | 480, 1420, 1492 |
| PdmI | GAANNNNTTC | 4 cut(s) | 248, 339, 1645, 1942 |
| PfeI | GAWTC | 4 cut(s) | 823, 1186, 1316, 2201 |
| PflFI | GACNNNGTC | 2 cut(s) | 1132, 1888 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 282, 1204 |
| PfoI | TCCNGGA | 1 cut(s) | 1933 |
| PleI | GAGTC | 6 cut(s) | 377, 542, 665, 1011, 2197, 2404 |
| PluTI | GGCGCC | 1 cut(s) | 222 |
| PpsI | GAGTC | 6 cut(s) | 377, 542, 665, 1011, 2197, 2404 |
| Ppu21I | YACGTR | 1 cut(s) | 110 |
| PshAI | GACNNNNGTC | 1 cut(s) | 799 |
| PshBI | ATTAAT | 2 cut(s) | 2010, 2304 |
| Psp6I | CCWGG | 2 cut(s) | 1243, 1933 |
| PspEI | GGTNACC | 1 cut(s) | 1061 |
| PspFI | CCCAGC | 1 cut(s) | 2264 |
| PspGI | CCWGG | 2 cut(s) | 1243, 1933 |
| PspN4I | GGNNCC | 3 cut(s) | 220, 1549, 1932 |
| PspPI | GGNCC | 4 cut(s) | 517, 924, 1195, 2247 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 50, 82 |
| PstI | CTGCAG | 3 cut(s) | 79, 85, 2164 |
| PstNI | CAGNNNCTG | 2 cut(s) | 557, 2215 |
| PsuI | RGATCY | 3 cut(s) | 160, 1104, 1930 |
| PsyI | GACNNNGTC | 2 cut(s) | 1132, 1888 |
| PvuII | CAGCTG | 3 cut(s) | 80, 95, 554 |
| RsaI | GTAC | 5 cut(s) | 353, 1049, 1549, 1803, 2175 |
| RsaNI | GTAC | 5 cut(s) | 352, 1048, 1548, 1802, 2174 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2337 |
| SaqAI | TTAA | 6 cut(s) | 1281, 1794, 1926, 2010, 2142, 2304 |
| Sau96I | GGNCC | 4 cut(s) | 517, 924, 1195, 2247 |
| ScaI | AGTACT | 1 cut(s) | 353 |
| SchI | GAGTC | 6 cut(s) | 378, 542, 666, 1012, 2198, 2405 |
| ScrFI | CCNGG | 2 cut(s) | 1245, 1935 |
| SduI | GDGCHC | 3 cut(s) | 997, 1612, 1679 |
| SfaNI | GCATC | 6 cut(s) | 318, 1372, 1651, 1902, 1977, 2380 |
| SfcI | CTRYAG | 3 cut(s) | 75, 81, 2160 |
| SfoI | GGCGCC | 1 cut(s) | 220 |
| SfuI | TTCGAA | 1 cut(s) | 1756 |
| SinI | GGWCC | 1 cut(s) | 2247 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2337 |
| SmlI | CTYRAG | 4 cut(s) | 263, 1023, 1613, 1925 |
| SmoI | CTYRAG | 4 cut(s) | 263, 1023, 1613, 1925 |
| SspDI | GGCGCC | 1 cut(s) | 218 |
| SspMI | CTAG | 6 cut(s) | 213, 687, 1041, 1997, 2042, 2219 |
| StyD4I | CCNGG | 2 cut(s) | 1243, 1933 |
| TaaI | ACNGT | 3 cut(s) | 1134, 1155, 1888 |
| TaiI | ACGT | 7 cut(s) | 112, 398, 538, 843, 904, 1705, 2073 |
| TaqI | TCGA | 9 cut(s) | 398, 647, 1127, 1470, 1756, 2092, 2204, 2256, 2319 |
| TatI | WGTACW | 2 cut(s) | 351, 2173 |
| TauI | GCSGC | 4 cut(s) | 309, 1406, 1523, 1918 |
| TfiI | GAWTC | 4 cut(s) | 823, 1186, 1316, 2201 |
| Tru1I | TTAA | 6 cut(s) | 1281, 1794, 1926, 2010, 2142, 2304 |
| Tru9I | TTAA | 6 cut(s) | 1281, 1794, 1926, 2010, 2142, 2304 |
| TscAI | CASTG | 3 cut(s) | 60, 815, 1351 |
| TseFI | GTSAC | 3 cut(s) | 197, 370, 1291 |
| Tsp45I | GTSAC | 3 cut(s) | 197, 370, 1291 |
| TspDTI | ATGAA | 7 cut(s) | 257, 351, 453, 1201, 1613, 2221, 2367 |
| TspRI | CASTG | 3 cut(s) | 60, 815, 1351 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1132, 1888 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 282, 1204 |
| Vha464I | CTTAAG | 1 cut(s) | 1925 |
| VpaK11BI | GGWCC | 1 cut(s) | 2247 |
| VspI | ATTAAT | 2 cut(s) | 2010, 2304 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 749, 2135 |
| XapI | RAATTY | 1 cut(s) | 137 |
| XceI | RCATGY | 3 cut(s) | 800, 1039, 1448 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 942, 1082, 2257 |
| XmaJI | CCTAGG | 2 cut(s) | 212, 1040 |
| XmiI | GTMKAC | 2 cut(s) | 432, 1687 |
| XmnI | GAANNNNTTC | 4 cut(s) | 248, 339, 1645, 1942 |
| XspI | CTAG | 6 cut(s) | 213, 687, 1041, 1997, 2042, 2219 |
| ZrmI | AGTACT | 1 cut(s) | 353 |