transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 179 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 578, 986 |
| AccI | GTMKAC | 1 cut(s) | 662 |
| AciI | CCGC | 1 cut(s) | 517 |
| AclWI | GGATC | 3 cut(s) | 50, 543, 722 |
| AcsI | RAATTY | 5 cut(s) | 223, 383, 478, 749, 905 |
| AfaI | GTAC | 2 cut(s) | 1000, 1079 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 578, 986 |
| AflIII | ACRYGT | 1 cut(s) | 684 |
| AgsI | TTSAA | 8 cut(s) | 11, 229, 381, 671, 691, 902, 958, 1118 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 132, 164 |
| AluBI | AGCT | 3 cut(s) | 608, 808, 1103 |
| AluI | AGCT | 3 cut(s) | 608, 808, 1103 |
| Alw26I | GTCTC | 1 cut(s) | 457 |
| AlwI | GGATC | 3 cut(s) | 50, 543, 722 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 578 |
| ApeKI | GCWGC | 2 cut(s) | 411, 679 |
| ApoI | RAATTY | 5 cut(s) | 223, 383, 478, 749, 905 |
| AseI | ATTAAT | 3 cut(s) | 216, 332, 374 |
| AspLEI | GCGC | 1 cut(s) | 416 |
| AsuHPI | GGTGA | 1 cut(s) | 790 |
| AsuII | TTCGAA | 1 cut(s) | 644 |
| BbvI | GCAGC | 2 cut(s) | 423, 691 |
| BccI | CCATC | 1 cut(s) | 843 |
| BclI | TGATCA | 1 cut(s) | 1003 |
| BcoDI | GTCTC | 1 cut(s) | 457 |
| BfmI | CTRYAG | 1 cut(s) | 399 |
| BisI | GCNGC | 2 cut(s) | 412, 680 |
| BlsI | GCNGC | 2 cut(s) | 413, 681 |
| BmcAI | AGTACT | 1 cut(s) | 1000 |
| BmiI | GGNNCC | 4 cut(s) | 108, 492, 854, 890 |
| Bpu10I | CCTNAGC | 1 cut(s) | 444 |
| Bpu14I | TTCGAA | 1 cut(s) | 644 |
| BsaBI | GATNNNNATC | 2 cut(s) | 423, 790 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 644, 674 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 578, 986 |
| Bse3DI | GCAATG | 2 cut(s) | 491, 1148 |
| Bse8I | GATNNNNATC | 2 cut(s) | 423, 790 |
| BseGI | GGATG | 2 cut(s) | 767, 791 |
| BseJI | GATNNNNATC | 2 cut(s) | 423, 790 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 578, 986 |
| BseMI | GCAATG | 2 cut(s) | 491, 1148 |
| BseMII | CTCAG | 2 cut(s) | 435, 522 |
| BseRI | GAGGAG | 2 cut(s) | 475, 845 |
| BseXI | GCAGC | 2 cut(s) | 423, 691 |
| BslFI | GGGAC | 1 cut(s) | 520 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 578, 986 |
| BsmAI | GTCTC | 1 cut(s) | 457 |
| BsmFI | GGGAC | 1 cut(s) | 520 |
| BsmI | GAATGC | 1 cut(s) | 322 |
| Bsp119I | TTCGAA | 1 cut(s) | 644 |
| Bsp1407I | TGTACA | 1 cut(s) | 1077 |
| Bsp143I | GATC | 5 cut(s) | 55, 535, 727, 835, 1003 |
| BspACI | CCGC | 1 cut(s) | 517 |
| BspCNI | CTCAG | 2 cut(s) | 436, 523 |
| BspHI | TCATGA | 1 cut(s) | 937 |
| BspLI | GGNNCC | 4 cut(s) | 108, 492, 854, 890 |
| BspMAI | CTGCAG | 1 cut(s) | 403 |
| BspPI | GGATC | 3 cut(s) | 50, 543, 722 |
| BspT104I | TTCGAA | 1 cut(s) | 644 |
| BsrDI | GCAATG | 2 cut(s) | 491, 1148 |
| BsrGI | TGTACA | 1 cut(s) | 1077 |
| BssMI | GATC | 5 cut(s) | 55, 535, 727, 835, 1003 |
| Bst4CI | ACNGT | 2 cut(s) | 146, 998 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 429 |
| BstAUI | TGTACA | 1 cut(s) | 1077 |
| BstBI | TTCGAA | 1 cut(s) | 644 |
| BstDEI | CTNAG | 2 cut(s) | 444, 531 |
| BstF5I | GGATG | 2 cut(s) | 767, 791 |
| BstHHI | GCGC | 1 cut(s) | 416 |
| BstKTI | GATC | 5 cut(s) | 58, 538, 730, 838, 1006 |
| BstMAI | GTCTC | 1 cut(s) | 457 |
| BstMBI | GATC | 5 cut(s) | 55, 535, 727, 835, 1003 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 420, 429, 1100 |
| BstNSI | RCATGY | 4 cut(s) | 82, 294, 688, 739 |
| BstSFI | CTRYAG | 1 cut(s) | 399 |
| BstV1I | GCAGC | 2 cut(s) | 423, 691 |
| BstX2I | RGATCY | 1 cut(s) | 535 |
| BstYI | RGATCY | 1 cut(s) | 535 |
| BtsCI | GGATG | 2 cut(s) | 767, 791 |
| CaiI | CAGNNNCTG | 1 cut(s) | 578 |
| CciI | TCATGA | 1 cut(s) | 937 |
| CfoI | GCGC | 1 cut(s) | 416 |
| Csp6I | GTAC | 2 cut(s) | 999, 1078 |
| CviAII | CATG | 9 cut(s) | 43, 79, 291, 611, 685, 710, 736, 938, 1065 |
| CviJI | RGCY | 5 cut(s) | 578, 608, 808, 853, 1103 |
| CviKI_1 | RGCY | 5 cut(s) | 578, 608, 808, 853, 1103 |
| CviQI | GTAC | 2 cut(s) | 999, 1078 |
| DdeI | CTNAG | 2 cut(s) | 444, 531 |
| DpnI | GATC | 5 cut(s) | 57, 537, 729, 837, 1005 |
| DpnII | GATC | 5 cut(s) | 55, 535, 727, 835, 1003 |
| EcoT22I | ATGCAT | 2 cut(s) | 434, 1014 |
| FaeI | CATG | 9 cut(s) | 46, 82, 294, 614, 688, 713, 739, 941, 1068 |
| FaqI | GGGAC | 1 cut(s) | 520 |
| FatI | CATG | 9 cut(s) | 42, 78, 290, 610, 684, 709, 735, 937, 1064 |
| FbaI | TGATCA | 1 cut(s) | 1003 |
| FblI | GTMKAC | 1 cut(s) | 662 |
| Fnu4HI | GCNGC | 2 cut(s) | 412, 680 |
| FokI | GGATG | 2 cut(s) | 774, 778 |
| Fsp4HI | GCNGC | 2 cut(s) | 412, 680 |
| GlaI | GCGC | 1 cut(s) | 415 |
| GluI | GCNGC | 2 cut(s) | 412, 680 |
| HhaI | GCGC | 1 cut(s) | 416 |
| Hin1II | CATG | 9 cut(s) | 46, 82, 294, 614, 688, 713, 739, 941, 1068 |
| Hin6I | GCGC | 1 cut(s) | 414 |
| HinP1I | GCGC | 1 cut(s) | 414 |
| HincII | GTYRAC | 1 cut(s) | 584 |
| HindII | GTYRAC | 1 cut(s) | 584 |
| HindIII | AAGCTT | 2 cut(s) | 806, 1101 |
| HinfI | GANTC | 3 cut(s) | 35, 596, 797 |
| HphI | GGTGA | 1 cut(s) | 790 |
| Hpy166II | GTNNAC | 3 cut(s) | 584, 663, 980 |
| Hpy188I | TCNGA | 5 cut(s) | 50, 60, 532, 796, 1025 |
| Hpy188III | TCNNGA | 4 cut(s) | 67, 312, 572, 938 |
| Hpy8I | GTNNAC | 3 cut(s) | 584, 663, 980 |
| HpyAV | CCTTC | 3 cut(s) | 169, 504, 650 |
| HpyCH4III | ACNGT | 2 cut(s) | 146, 998 |
| HpyCH4IV | ACGT | 1 cut(s) | 91 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 420, 429, 1100 |
| HpyF3I | CTNAG | 2 cut(s) | 444, 531 |
| HpySE526I | ACGT | 1 cut(s) | 91 |
| Hsp92II | CATG | 9 cut(s) | 46, 82, 294, 614, 688, 713, 739, 941, 1068 |
| HspAI | GCGC | 1 cut(s) | 414 |
| Ksp22I | TGATCA | 1 cut(s) | 1003 |
| Kzo9I | GATC | 5 cut(s) | 55, 535, 727, 835, 1003 |
| LmnI | GCTCC | 1 cut(s) | 858 |
| LpnPI | CCDG | 6 cut(s) | 80, 454, 456, 564, 585, 972 |
| Lsp1109I | GCAGC | 2 cut(s) | 423, 691 |
| MaeII | ACGT | 1 cut(s) | 91 |
| MalI | GATC | 5 cut(s) | 57, 537, 729, 837, 1005 |
| MboI | GATC | 5 cut(s) | 55, 535, 727, 835, 1003 |
| MboII | GAAGA | 1 cut(s) | 387 |
| MflI | RGATCY | 1 cut(s) | 535 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| MnlI | CCTC | 9 cut(s) | 97, 453, 526, 568, 646, 776, 866, 1019, 1064 |
| Mph1103I | ATGCAT | 2 cut(s) | 434, 1014 |
| MslI | CAYNNNNRTG | 2 cut(s) | 289, 1141 |
| Mva1269I | GAATGC | 1 cut(s) | 322 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 420, 429, 1100 |
| NdeII | GATC | 5 cut(s) | 55, 535, 727, 835, 1003 |
| NlaIII | CATG | 9 cut(s) | 46, 82, 294, 614, 688, 713, 739, 941, 1068 |
| NlaIV | GGNNCC | 4 cut(s) | 108, 492, 854, 890 |
| NsiI | ATGCAT | 2 cut(s) | 434, 1014 |
| NspI | RCATGY | 4 cut(s) | 82, 294, 688, 739 |
| NspV | TTCGAA | 1 cut(s) | 644 |
| PagI | TCATGA | 1 cut(s) | 937 |
| PciI | ACATGT | 1 cut(s) | 684 |
| PctI | GAATGC | 1 cut(s) | 322 |
| PfeI | GAWTC | 3 cut(s) | 35, 596, 797 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 578, 986 |
| PkrI | GCNGC | 2 cut(s) | 413, 681 |
| PscI | ACATGT | 1 cut(s) | 684 |
| PshBI | ATTAAT | 3 cut(s) | 216, 332, 374 |
| PsiI | TTATAA | 1 cut(s) | 179 |
| PspN4I | GGNNCC | 4 cut(s) | 108, 492, 854, 890 |
| PstI | CTGCAG | 1 cut(s) | 403 |
| PstNI | CAGNNNCTG | 1 cut(s) | 578 |
| PsuI | RGATCY | 1 cut(s) | 535 |
| RsaI | GTAC | 2 cut(s) | 1000, 1079 |
| RsaNI | GTAC | 2 cut(s) | 999, 1078 |
| RseI | CAYNNNNRTG | 2 cut(s) | 289, 1141 |
| SatI | GCNGC | 2 cut(s) | 412, 680 |
| Sau3AI | GATC | 5 cut(s) | 55, 535, 727, 835, 1003 |
| ScaI | AGTACT | 1 cut(s) | 1000 |
| SetI | ASST | 9 cut(s) | 94, 108, 249, 445, 589, 610, 810, 1075, 1105 |
| SfcI | CTRYAG | 1 cut(s) | 399 |
| SfuI | TTCGAA | 1 cut(s) | 644 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 289, 1141 |
| SsiI | CCGC | 1 cut(s) | 517 |
| SspI | AATATT | 3 cut(s) | 172, 694, 772 |
| TaaI | ACNGT | 2 cut(s) | 146, 998 |
| TaiI | ACGT | 1 cut(s) | 94 |
| TaqI | TCGA | 2 cut(s) | 644, 811 |
| TatI | WGTACW | 2 cut(s) | 998, 1077 |
| TfiI | GAWTC | 3 cut(s) | 35, 596, 797 |
| TseI | GCWGC | 2 cut(s) | 411, 679 |
| TspDTI | ATGAA | 9 cut(s) | 10, 31, 48, 151, 588, 698, 780, 926, 1053 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 578, 986 |
| VspI | ATTAAT | 3 cut(s) | 216, 332, 374 |
| XapI | RAATTY | 5 cut(s) | 223, 383, 478, 749, 905 |
| XceI | RCATGY | 4 cut(s) | 82, 294, 688, 739 |
| XmiI | GTMKAC | 1 cut(s) | 662 |
| ZrmI | AGTACT | 1 cut(s) | 1000 |
| Zsp2I | ATGCAT | 2 cut(s) | 434, 1014 |