protein kinase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 725 - 887 | 2.7e-29 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 951 - 1049 | 1.5e-34 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 976 - 1079 | 2e-37 | RNase H-like domain found in reverse transcriptase |
| Integrase_H2C2 | PF17921 | 1180 - 1236 | 2.1e-13 | Integrase zinc binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2786 |
| AarI | CACCTGC | 1 cut(s) | 298 |
| AatII | GACGTC | 1 cut(s) | 1411 |
| Acc36I | ACCTGC | 2 cut(s) | 298, 1221 |
| AccB1I | GGYRCC | 1 cut(s) | 1765 |
| AccI | GTMKAC | 2 cut(s) | 2017, 2685 |
| AccII | CGCG | 2 cut(s) | 227, 1735 |
| AccIII | TCCGGA | 1 cut(s) | 2639 |
| AciI | CCGC | 3 cut(s) | 1733, 2075, 2238 |
| AclWI | GGATC | 6 cut(s) | 23, 1103, 2742, 3139, 3211, 3224 |
| AcoI | YGGCCR | 2 cut(s) | 3595, 3650 |
| AcuI | CTGAAG | 1 cut(s) | 494 |
| AcyI | GRCGYC | 1 cut(s) | 1408 |
| AfaI | GTAC | 7 cut(s) | 1077, 1211, 1761, 2130, 2401, 3471, 3540 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 497, 2244, 3466 |
| AflII | CTTAAG | 1 cut(s) | 1235 |
| AflIII | ACRYGT | 4 cut(s) | 700, 1424, 2387, 3689 |
| AjnI | CCWGG | 2 cut(s) | 435, 3459 |
| Alw21I | GWGCWC | 4 cut(s) | 110, 1016, 3052, 3084 |
| Alw26I | GTCTC | 4 cut(s) | 188, 368, 432, 495 |
| Alw44I | GTGCAC | 1 cut(s) | 1012 |
| AlwI | GGATC | 6 cut(s) | 23, 1103, 2742, 3139, 3211, 3224 |
| Aor13HI | TCCGGA | 1 cut(s) | 2639 |
| AoxI | GGCC | 4 cut(s) | 1899, 2299, 3595, 3650 |
| ApaLI | GTGCAC | 1 cut(s) | 1012 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 526, 558, 2828, 2860 |
| AseI | ATTAAT | 2 cut(s) | 2885, 3333 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2178, 3455 |
| AspLEI | GCGC | 3 cut(s) | 229, 778, 2208 |
| AspS9I | GGNCC | 6 cut(s) | 1312, 1687, 1820, 1900, 2632, 3797 |
| AsuC2I | CCSGG | 1 cut(s) | 1113 |
| AsuHPI | GGTGA | 7 cut(s) | 68, 322, 422, 1241, 2546, 2913, 3172 |
| AvaII | GGWCC | 5 cut(s) | 1312, 1687, 1820, 2632, 3797 |
| BaeGI | GKGCMC | 1 cut(s) | 1016 |
| BalI | TGGCCA | 2 cut(s) | 3597, 3652 |
| BamHI | GGATCC | 1 cut(s) | 3216 |
| BanI | GGYRCC | 1 cut(s) | 1765 |
| BanII | GRGCYC | 1 cut(s) | 3084 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1179, 1211 |
| BbsI | GAAGAC | 1 cut(s) | 177 |
| Bbv12I | GWGCWC | 4 cut(s) | 110, 1016, 3052, 3084 |
| BccI | CCATC | 5 cut(s) | 499, 1698, 1759, 2005, 2318 |
| BciT130I | CCWGG | 2 cut(s) | 437, 3461 |
| BciVI | GTATCC | 1 cut(s) | 1351 |
| BclI | TGATCA | 2 cut(s) | 2154, 2275 |
| BcnI | CCSGG | 1 cut(s) | 1113 |
| BcoDI | GTCTC | 4 cut(s) | 188, 368, 432, 495 |
| BfmI | CTRYAG | 2 cut(s) | 1214, 2221 |
| BfrI | CTTAAG | 1 cut(s) | 1235 |
| BfuAI | ACCTGC | 2 cut(s) | 298, 1221 |
| BfuI | GTATCC | 1 cut(s) | 1351 |
| BmcAI | AGTACT | 1 cut(s) | 1077 |
| Bme1390I | CCNGG | 3 cut(s) | 437, 1113, 3461 |
| Bme18I | GGWCC | 5 cut(s) | 1312, 1687, 1820, 2632, 3797 |
| BmgT120I | GGNCC | 6 cut(s) | 1312, 1687, 1820, 1900, 2632, 3797 |
| BmrFI | CCNGG | 3 cut(s) | 437, 1113, 3461 |
| BmrI | ACTGGG | 1 cut(s) | 2620 |
| BmuI | ACTGGG | 1 cut(s) | 2620 |
| BpiI | GAAGAC | 1 cut(s) | 177 |
| BpmI | CTGGAG | 2 cut(s) | 1796, 3411 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3195 |
| BpuMI | CCSGG | 1 cut(s) | 1113 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3312 |
| BsaHI | GRCGYC | 1 cut(s) | 1408 |
| BsaI | GGTCTC | 1 cut(s) | 188 |
| BsaJI | CCNNGG | 4 cut(s) | 435, 1286, 1690, 3380 |
| BsaWI | WCCGGW | 1 cut(s) | 2639 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2890, 2920 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 497, 2244, 3466 |
| Bse1I | ACTGG | 3 cut(s) | 182, 1779, 2615 |
| Bse3DI | GCAATG | 4 cut(s) | 13, 564, 2891, 3641 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3312 |
| BseAI | TCCGGA | 1 cut(s) | 2639 |
| BseBI | CCWGG | 2 cut(s) | 437, 3461 |
| BseDI | CCNNGG | 4 cut(s) | 435, 1286, 1690, 3380 |
| BseGI | GGATG | 9 cut(s) | 400, 672, 1309, 1709, 1993, 2077, 2521, 3196, 3493 |
| BseJI | GATNNNNATC | 1 cut(s) | 3312 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 497, 2244, 3466 |
| BseMI | GCAATG | 4 cut(s) | 13, 564, 2891, 3641 |
| BseMII | CTCAG | 5 cut(s) | 675, 1371, 2043, 2346, 3534 |
| BseNI | ACTGG | 3 cut(s) | 182, 1779, 2615 |
| BseSI | GKGCMC | 1 cut(s) | 1016 |
| BseYI | CCCAGC | 1 cut(s) | 385 |
| BsgI | GTGCAG | 2 cut(s) | 849, 3534 |
| Bsh1236I | CGCG | 2 cut(s) | 227, 1735 |
| BshFI | GGCC | 4 cut(s) | 1901, 2301, 3597, 3652 |
| BshNI | GGYRCC | 1 cut(s) | 1765 |
| BsiHKAI | GWGCWC | 4 cut(s) | 110, 1016, 3052, 3084 |
| BsiSI | CCGG | 2 cut(s) | 1113, 2640 |
| BslFI | GGGAC | 2 cut(s) | 431, 2618 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 497, 2244, 3466 |
| BsmAI | GTCTC | 4 cut(s) | 188, 368, 432, 495 |
| BsmFI | GGGAC | 2 cut(s) | 431, 2618 |
| BsmI | GAATGC | 3 cut(s) | 1811, 2424, 3442 |
| BsnI | GGCC | 4 cut(s) | 1901, 2301, 3597, 3652 |
| Bso31I | GGTCTC | 1 cut(s) | 188 |
| Bsp1286I | GDGCHC | 4 cut(s) | 110, 1016, 3052, 3084 |
| Bsp13I | TCCGGA | 1 cut(s) | 2639 |
| Bsp1407I | TGTACA | 1 cut(s) | 1759 |
| BspACI | CCGC | 3 cut(s) | 1733, 2075, 2238 |
| BspANI | GGCC | 4 cut(s) | 1901, 2301, 3597, 3652 |
| BspCNI | CTCAG | 5 cut(s) | 676, 1372, 2044, 2345, 3535 |
| BspEI | TCCGGA | 1 cut(s) | 2639 |
| BspFNI | CGCG | 2 cut(s) | 227, 1735 |
| BspHI | TCATGA | 1 cut(s) | 1620 |
| BspMAI | CTGCAG | 1 cut(s) | 1218 |
| BspMI | ACCTGC | 2 cut(s) | 298, 1221 |
| BspPI | GGATC | 6 cut(s) | 23, 1103, 2742, 3139, 3211, 3224 |
| BspQI | GCTCTTC | 1 cut(s) | 1580 |
| BspT107I | GGYRCC | 1 cut(s) | 1765 |
| BspTI | CTTAAG | 1 cut(s) | 1235 |
| BspTNI | GGTCTC | 1 cut(s) | 188 |
| BsrDI | GCAATG | 4 cut(s) | 13, 564, 2891, 3641 |
| BsrGI | TGTACA | 1 cut(s) | 1759 |
| BsrI | ACTGG | 3 cut(s) | 182, 1779, 2615 |
| BssECI | CCNNGG | 4 cut(s) | 435, 1286, 1690, 3380 |
| BssNI | GRCGYC | 1 cut(s) | 1408 |
| BssT1I | CCWWGG | 3 cut(s) | 1286, 1690, 3380 |
| Bst2UI | CCWGG | 2 cut(s) | 437, 3461 |
| Bst4CI | ACNGT | 6 cut(s) | 238, 870, 1018, 2102, 2152, 3901 |
| Bst6I | CTCTTC | 6 cut(s) | 97, 513, 594, 1580, 1977, 2583 |
| BstACI | GRCGYC | 1 cut(s) | 1408 |
| BstAFI | CTTAAG | 1 cut(s) | 1235 |
| BstAUI | TGTACA | 1 cut(s) | 1759 |
| BstC8I | GCNNGC | 4 cut(s) | 729, 864, 1263, 2299 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3464 |
| BstF5I | GGATG | 9 cut(s) | 400, 672, 1309, 1709, 1993, 2077, 2521, 3196, 3493 |
| BstFNI | CGCG | 2 cut(s) | 227, 1735 |
| BstHHI | GCGC | 3 cut(s) | 229, 778, 2208 |
| BstMAI | GTCTC | 4 cut(s) | 188, 368, 432, 495 |
| BstNI | CCWGG | 2 cut(s) | 437, 3461 |
| BstNSI | RCATGY | 8 cut(s) | 731, 1428, 1811, 2212, 2391, 2765, 3591, 3693 |
| BstSCI | CCNGG | 3 cut(s) | 435, 1111, 3459 |
| BstSFI | CTRYAG | 2 cut(s) | 1214, 2221 |
| BstSLI | GKGCMC | 1 cut(s) | 1016 |
| BstUI | CGCG | 2 cut(s) | 227, 1735 |
| BstV2I | GAAGAC | 1 cut(s) | 177 |
| BstX2I | RGATCY | 4 cut(s) | 28, 1108, 2747, 3216 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2850 |
| BstYI | RGATCY | 4 cut(s) | 28, 1108, 2747, 3216 |
| BsuI | GTATCC | 1 cut(s) | 1351 |
| BsuRI | GGCC | 4 cut(s) | 1901, 2301, 3597, 3652 |
| BtsCI | GGATG | 9 cut(s) | 400, 672, 1309, 1709, 1993, 2077, 2521, 3196, 3493 |
| BtsIMutI | CAGTG | 5 cut(s) | 175, 1014, 1212, 2157, 2803 |
| BveI | ACCTGC | 2 cut(s) | 298, 1221 |
| Cac8I | GCNNGC | 4 cut(s) | 729, 864, 1263, 2299 |
| CciI | TCATGA | 1 cut(s) | 1620 |
| CfoI | GCGC | 3 cut(s) | 229, 778, 2208 |
| Cfr13I | GGNCC | 6 cut(s) | 1312, 1687, 1820, 1900, 2632, 3797 |
| Csp6I | GTAC | 7 cut(s) | 1076, 1210, 1760, 2129, 2400, 3470, 3539 |
| CviQI | GTAC | 7 cut(s) | 1076, 1210, 1760, 2129, 2400, 3470, 3539 |
| DraI | TTTAAA | 1 cut(s) | 3505 |
| EaeI | YGGCCR | 2 cut(s) | 3595, 3650 |
| Eam1104I | CTCTTC | 6 cut(s) | 97, 513, 594, 1580, 1977, 2583 |
| EarI | CTCTTC | 6 cut(s) | 97, 513, 594, 1580, 1977, 2583 |
| Ecl136II | GAGCTC | 1 cut(s) | 3082 |
| Eco130I | CCWWGG | 3 cut(s) | 1286, 1690, 3380 |
| Eco24I | GRGCYC | 1 cut(s) | 3084 |
| Eco31I | GGTCTC | 1 cut(s) | 188 |
| Eco32I | GATATC | 2 cut(s) | 3241, 3821 |
| Eco47I | GGWCC | 5 cut(s) | 1312, 1687, 1820, 2632, 3797 |
| Eco53kI | GAGCTC | 1 cut(s) | 3082 |
| Eco57I | CTGAAG | 1 cut(s) | 494 |
| EcoICRI | GAGCTC | 1 cut(s) | 3082 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3464 |
| EcoRII | CCWGG | 2 cut(s) | 435, 3459 |
| EcoRV | GATATC | 2 cut(s) | 3241, 3821 |
| EcoT14I | CCWWGG | 3 cut(s) | 1286, 1690, 3380 |
| EcoT22I | ATGCAT | 5 cut(s) | 1572, 1813, 2465, 3558, 3679 |
| EcoT38I | GRGCYC | 1 cut(s) | 3084 |
| ErhI | CCWWGG | 3 cut(s) | 1286, 1690, 3380 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 870, 902, 3022, 3054, 3069, 3101 |
| FaqI | GGGAC | 2 cut(s) | 431, 2618 |
| FauI | CCCGC | 1 cut(s) | 2068 |
| FauNDI | CATATG | 2 cut(s) | 1522, 3013 |
| FbaI | TGATCA | 2 cut(s) | 2154, 2275 |
| FblI | GTMKAC | 2 cut(s) | 2017, 2685 |
| FokI | GGATG | 9 cut(s) | 387, 679, 1316, 1716, 2000, 2084, 2528, 3203, 3500 |
| FriOI | GRGCYC | 1 cut(s) | 3084 |
| GlaI | GCGC | 3 cut(s) | 228, 777, 2207 |
| GsaI | CCCAGC | 1 cut(s) | 389 |
| GsuI | CTGGAG | 2 cut(s) | 1796, 3411 |
| HaeIII | GGCC | 4 cut(s) | 1901, 2301, 3597, 3652 |
| HapII | CCGG | 2 cut(s) | 1113, 2640 |
| HhaI | GCGC | 3 cut(s) | 229, 778, 2208 |
| Hin1I | GRCGYC | 1 cut(s) | 1408 |
| Hin6I | GCGC | 3 cut(s) | 227, 776, 2206 |
| HinP1I | GCGC | 3 cut(s) | 227, 776, 2206 |
| HindIII | AAGCTT | 3 cut(s) | 879, 1247, 1724 |
| HpaII | CCGG | 2 cut(s) | 1113, 2640 |
| HphI | GGTGA | 7 cut(s) | 68, 322, 422, 1241, 2546, 2913, 3172 |
| Hpy166II | GTNNAC | 9 cut(s) | 564, 1014, 1189, 1210, 1321, 1760, 2018, 2686, 3539 |
| Hpy188I | TCNGA | 9 cut(s) | 373, 513, 624, 916, 1381, 1389, 2098, 2607, 3373 |
| Hpy8I | GTNNAC | 9 cut(s) | 564, 1014, 1189, 1210, 1321, 1760, 2018, 2686, 3539 |
| HpyCH4III | ACNGT | 6 cut(s) | 238, 870, 1018, 2102, 2152, 3901 |
| HpyCH4IV | ACGT | 4 cut(s) | 700, 1408, 2014, 2402 |
| HpySE526I | ACGT | 4 cut(s) | 700, 1408, 2014, 2402 |
| Hsp92I | GRCGYC | 1 cut(s) | 1408 |
| HspAI | GCGC | 3 cut(s) | 227, 776, 2206 |
| Kpn2I | TCCGGA | 1 cut(s) | 2639 |
| Ksp22I | TGATCA | 2 cut(s) | 2154, 2275 |
| LguI | GCTCTTC | 1 cut(s) | 1580 |
| LmnI | GCTCC | 5 cut(s) | 1777, 2005, 2911, 3087, 3713 |
| MaeII | ACGT | 4 cut(s) | 700, 1408, 2014, 2402 |
| MaeIII | GTNAC | 5 cut(s) | 86, 2327, 2654, 2963, 3409 |
| MfeI | CAATTG | 1 cut(s) | 762 |
| MflI | RGATCY | 4 cut(s) | 28, 1108, 2747, 3216 |
| MhlI | GDGCHC | 4 cut(s) | 110, 1016, 3052, 3084 |
| MlsI | TGGCCA | 2 cut(s) | 3597, 3652 |
| MluNI | TGGCCA | 2 cut(s) | 3597, 3652 |
| MlyI | GAGTC | 3 cut(s) | 83, 434, 833 |
| MmeI | TCCRAC | 2 cut(s) | 395, 3109 |
| Mox20I | TGGCCA | 2 cut(s) | 3597, 3652 |
| Mph1103I | ATGCAT | 5 cut(s) | 1572, 1813, 2465, 3558, 3679 |
| MroI | TCCGGA | 1 cut(s) | 2639 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2178, 3455 |
| MscI | TGGCCA | 2 cut(s) | 3597, 3652 |
| Msp20I | TGGCCA | 2 cut(s) | 3597, 3652 |
| MspA1I | CMGCKG | 2 cut(s) | 1261, 3620 |
| MspCI | CTTAAG | 1 cut(s) | 1235 |
| MspI | CCGG | 2 cut(s) | 1113, 2640 |
| MspR9I | CCNGG | 3 cut(s) | 437, 1113, 3461 |
| MunI | CAATTG | 1 cut(s) | 762 |
| Mva1269I | GAATGC | 3 cut(s) | 1811, 2424, 3442 |
| MvaI | CCWGG | 2 cut(s) | 437, 3461 |
| MvnI | CGCG | 2 cut(s) | 227, 1735 |
| NciI | CCSGG | 1 cut(s) | 1113 |
| NdeI | CATATG | 2 cut(s) | 1522, 3013 |
| NmuCI | GTSAC | 4 cut(s) | 86, 2654, 2963, 3409 |
| NsiI | ATGCAT | 5 cut(s) | 1572, 1813, 2465, 3558, 3679 |
| NspI | RCATGY | 8 cut(s) | 731, 1428, 1811, 2212, 2391, 2765, 3591, 3693 |
| PaeI | GCATGC | 1 cut(s) | 731 |
| PagI | TCATGA | 1 cut(s) | 1620 |
| PaqCI | CACCTGC | 1 cut(s) | 298 |
| PciI | ACATGT | 3 cut(s) | 1424, 2387, 3689 |
| PciSI | GCTCTTC | 1 cut(s) | 1580 |
| PctI | GAATGC | 3 cut(s) | 1811, 2424, 3442 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2178, 3455 |
| PleI | GAGTC | 3 cut(s) | 83, 433, 832 |
| PpsI | GAGTC | 3 cut(s) | 83, 433, 832 |
| PscI | ACATGT | 3 cut(s) | 1424, 2387, 3689 |
| PshBI | ATTAAT | 2 cut(s) | 2885, 3333 |
| PsiI | TTATAA | 1 cut(s) | 2786 |
| Psp124BI | GAGCTC | 1 cut(s) | 3084 |
| Psp6I | CCWGG | 2 cut(s) | 435, 3459 |
| PspFI | CCCAGC | 1 cut(s) | 385 |
| PspGI | CCWGG | 2 cut(s) | 435, 3459 |
| PspPI | GGNCC | 6 cut(s) | 1312, 1687, 1820, 1900, 2632, 3797 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1356, 1388 |
| PstI | CTGCAG | 1 cut(s) | 1218 |
| PsuI | RGATCY | 4 cut(s) | 28, 1108, 2747, 3216 |
| PvuII | CAGCTG | 2 cut(s) | 1261, 3620 |
| RsaI | GTAC | 7 cut(s) | 1077, 1211, 1761, 2130, 2401, 3471, 3540 |
| RsaNI | GTAC | 7 cut(s) | 1076, 1210, 1760, 2129, 2400, 3470, 3539 |
| SacI | GAGCTC | 1 cut(s) | 3084 |
| SapI | GCTCTTC | 1 cut(s) | 1580 |
| Sau96I | GGNCC | 6 cut(s) | 1312, 1687, 1820, 1900, 2632, 3797 |
| ScaI | AGTACT | 1 cut(s) | 1077 |
| SchI | GAGTC | 3 cut(s) | 83, 434, 833 |
| ScrFI | CCNGG | 3 cut(s) | 437, 1113, 3461 |
| SduI | GDGCHC | 4 cut(s) | 110, 1016, 3052, 3084 |
| SfcI | CTRYAG | 2 cut(s) | 1214, 2221 |
| SinI | GGWCC | 5 cut(s) | 1312, 1687, 1820, 2632, 3797 |
| SmiI | ATTTAAAT | 1 cut(s) | 3505 |
| SmlI | CTYRAG | 1 cut(s) | 1235 |
| SmoI | CTYRAG | 1 cut(s) | 1235 |
| SphI | GCATGC | 1 cut(s) | 731 |
| SsiI | CCGC | 3 cut(s) | 1733, 2075, 2238 |
| SspI | AATATT | 4 cut(s) | 359, 1498, 3509, 3768 |
| SstI | GAGCTC | 1 cut(s) | 3084 |
| StyD4I | CCNGG | 3 cut(s) | 435, 1111, 3459 |
| StyI | CCWWGG | 3 cut(s) | 1286, 1690, 3380 |
| SwaI | ATTTAAAT | 1 cut(s) | 3505 |
| TaaI | ACNGT | 6 cut(s) | 238, 870, 1018, 2102, 2152, 3901 |
| TaiI | ACGT | 4 cut(s) | 703, 1411, 2017, 2405 |
| TaqI | TCGA | 3 cut(s) | 3065, 3202, 3685 |
| TatI | WGTACW | 2 cut(s) | 1075, 1759 |
| TscAI | CASTG | 5 cut(s) | 182, 1021, 1212, 2157, 2803 |
| TseFI | GTSAC | 4 cut(s) | 86, 2654, 2963, 3409 |
| Tsp45I | GTSAC | 4 cut(s) | 86, 2654, 2963, 3409 |
| TspGWI | ACGGA | 2 cut(s) | 1376, 3789 |
| TspRI | CASTG | 5 cut(s) | 182, 1021, 1212, 2157, 2803 |
| Vha464I | CTTAAG | 1 cut(s) | 1235 |
| VneI | GTGCAC | 1 cut(s) | 1012 |
| VpaK11BI | GGWCC | 5 cut(s) | 1312, 1687, 1820, 2632, 3797 |
| VspI | ATTAAT | 2 cut(s) | 2885, 3333 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3464 |
| XbaI | TCTAGA | 3 cut(s) | 2320, 2563, 2807 |
| XceI | RCATGY | 8 cut(s) | 731, 1428, 1811, 2212, 2391, 2765, 3591, 3693 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1697 |
| XmiI | GTMKAC | 2 cut(s) | 2017, 2685 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2178, 3455 |
| ZraI | GACGTC | 1 cut(s) | 1409 |
| ZrmI | AGTACT | 1 cut(s) | 1077 |
| Zsp2I | ATGCAT | 5 cut(s) | 1572, 1813, 2465, 3558, 3679 |