transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 152, 475 |
| AcsI | RAATTY | 1 cut(s) | 644 |
| AfaI | GTAC | 1 cut(s) | 94 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 484 |
| AgsI | TTSAA | 9 cut(s) | 82, 122, 338, 354, 380, 509, 515, 542, 572 |
| AjnI | CCWGG | 2 cut(s) | 483, 586 |
| AluBI | AGCT | 6 cut(s) | 14, 109, 313, 419, 494, 575 |
| AluI | AGCT | 6 cut(s) | 14, 109, 313, 419, 494, 575 |
| AoxI | GGCC | 1 cut(s) | 472 |
| ApoI | RAATTY | 1 cut(s) | 644 |
| AseI | ATTAAT | 2 cut(s) | 27, 38 |
| AspS9I | GGNCC | 1 cut(s) | 472 |
| AsuHPI | GGTGA | 2 cut(s) | 314, 602 |
| BauI | CACGAG | 2 cut(s) | 110, 636 |
| BbsI | GAAGAC | 1 cut(s) | 11 |
| BccI | CCATC | 3 cut(s) | 70, 470, 620 |
| BciT130I | CCWGG | 2 cut(s) | 485, 588 |
| BfaI | CTAG | 2 cut(s) | 261, 366 |
| BisI | GCNGC | 1 cut(s) | 475 |
| BlsI | GCNGC | 1 cut(s) | 476 |
| Bme1390I | CCNGG | 2 cut(s) | 485, 588 |
| BmgT120I | GGNCC | 1 cut(s) | 472 |
| BmrFI | CCNGG | 2 cut(s) | 485, 588 |
| BmsI | GCATC | 1 cut(s) | 607 |
| BpiI | GAAGAC | 1 cut(s) | 11 |
| Bsa29I | ATCGAT | 1 cut(s) | 662 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 484 |
| BseBI | CCWGG | 2 cut(s) | 485, 588 |
| BseCI | ATCGAT | 1 cut(s) | 662 |
| BseGI | GGATG | 2 cut(s) | 448, 583 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 484 |
| BseRI | GAGGAG | 1 cut(s) | 384 |
| BshFI | GGCC | 1 cut(s) | 474 |
| BshVI | ATCGAT | 1 cut(s) | 662 |
| BsiSI | CCGG | 1 cut(s) | 519 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 484 |
| BsmI | GAATGC | 1 cut(s) | 608 |
| BsnI | GGCC | 1 cut(s) | 474 |
| Bsp1407I | TGTACA | 1 cut(s) | 92 |
| Bsp143I | GATC | 4 cut(s) | 187, 544, 659, 663 |
| BspACI | CCGC | 2 cut(s) | 152, 475 |
| BspANI | GGCC | 1 cut(s) | 474 |
| BspDI | ATCGAT | 1 cut(s) | 662 |
| BsrGI | TGTACA | 1 cut(s) | 92 |
| BssMI | GATC | 4 cut(s) | 187, 544, 659, 663 |
| BssSI | CACGAG | 2 cut(s) | 110, 636 |
| Bst2BI | CACGAG | 2 cut(s) | 110, 636 |
| Bst2UI | CCWGG | 2 cut(s) | 485, 588 |
| Bst4CI | ACNGT | 2 cut(s) | 350, 553 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 169 |
| BstAUI | TGTACA | 1 cut(s) | 92 |
| BstC8I | GCNNGC | 1 cut(s) | 608 |
| BstDEI | CTNAG | 1 cut(s) | 253 |
| BstF5I | GGATG | 2 cut(s) | 448, 583 |
| BstKTI | GATC | 4 cut(s) | 190, 547, 662, 666 |
| BstMBI | GATC | 4 cut(s) | 187, 544, 659, 663 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 169 |
| BstNI | CCWGG | 2 cut(s) | 485, 588 |
| BstNSI | RCATGY | 1 cut(s) | 610 |
| BstSCI | CCNGG | 2 cut(s) | 483, 586 |
| BstV2I | GAAGAC | 1 cut(s) | 11 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 469 |
| Bsu15I | ATCGAT | 1 cut(s) | 662 |
| BsuRI | GGCC | 1 cut(s) | 474 |
| BsuTUI | ATCGAT | 1 cut(s) | 662 |
| BtsCI | GGATG | 2 cut(s) | 448, 583 |
| BtsI | GCAGTG | 1 cut(s) | 154 |
| BtsIMutI | CAGTG | 1 cut(s) | 154 |
| Cac8I | GCNNGC | 1 cut(s) | 608 |
| Cfr13I | GGNCC | 1 cut(s) | 472 |
| ClaI | ATCGAT | 1 cut(s) | 662 |
| Csp6I | GTAC | 1 cut(s) | 93 |
| CviAII | CATG | 2 cut(s) | 439, 607 |
| CviQI | GTAC | 1 cut(s) | 93 |
| DdeI | CTNAG | 1 cut(s) | 253 |
| DpnI | GATC | 4 cut(s) | 189, 546, 661, 665 |
| DpnII | GATC | 4 cut(s) | 187, 544, 659, 663 |
| DraI | TTTAAA | 1 cut(s) | 292 |
| EcoRII | CCWGG | 2 cut(s) | 483, 586 |
| EcoT22I | ATGCAT | 2 cut(s) | 608, 622 |
| FaeI | CATG | 2 cut(s) | 442, 610 |
| FaiI | YATR | 8 cut(s) | 69, 165, 228, 409, 428, 440, 608, 650 |
| FatI | CATG | 2 cut(s) | 438, 606 |
| Fnu4HI | GCNGC | 1 cut(s) | 475 |
| FokI | GGATG | 2 cut(s) | 455, 570 |
| Fsp4HI | GCNGC | 1 cut(s) | 475 |
| FspBI | CTAG | 2 cut(s) | 261, 366 |
| GluI | GCNGC | 1 cut(s) | 475 |
| HaeIII | GGCC | 1 cut(s) | 474 |
| HapII | CCGG | 1 cut(s) | 519 |
| Hin1II | CATG | 2 cut(s) | 442, 610 |
| HincII | GTYRAC | 1 cut(s) | 400 |
| HindII | GTYRAC | 1 cut(s) | 400 |
| HinfI | GANTC | 3 cut(s) | 130, 372, 499 |
| HpaI | GTTAAC | 1 cut(s) | 400 |
| HpaII | CCGG | 1 cut(s) | 519 |
| HphI | GGTGA | 2 cut(s) | 314, 602 |
| Hpy166II | GTNNAC | 2 cut(s) | 268, 400 |
| Hpy188I | TCNGA | 2 cut(s) | 24, 498 |
| Hpy8I | GTNNAC | 2 cut(s) | 268, 400 |
| HpyAV | CCTTC | 1 cut(s) | 76 |
| HpyCH4III | ACNGT | 2 cut(s) | 350, 553 |
| HpyCH4IV | ACGT | 1 cut(s) | 87 |
| HpyCH4V | TGCA | 5 cut(s) | 147, 163, 213, 606, 620 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 169 |
| HpyF3I | CTNAG | 1 cut(s) | 253 |
| HpySE526I | ACGT | 1 cut(s) | 87 |
| Hsp92II | CATG | 2 cut(s) | 442, 610 |
| KspAI | GTTAAC | 1 cut(s) | 400 |
| Kzo9I | GATC | 4 cut(s) | 187, 544, 659, 663 |
| LpnPI | CCDG | 6 cut(s) | 429, 470, 497, 532, 573, 600 |
| LweI | GCATC | 1 cut(s) | 607 |
| MaeI | CTAG | 2 cut(s) | 261, 366 |
| MaeII | ACGT | 1 cut(s) | 87 |
| MalI | GATC | 4 cut(s) | 189, 546, 661, 665 |
| MboI | GATC | 4 cut(s) | 187, 544, 659, 663 |
| MboII | GAAGA | 4 cut(s) | 16, 193, 392, 554 |
| MfeI | CAATTG | 1 cut(s) | 338 |
| MluCI | AATT | 7 cut(s) | 39, 167, 223, 246, 338, 354, 644 |
| MlyI | GAGTC | 2 cut(s) | 381, 493 |
| MmeI | TCCRAC | 2 cut(s) | 351, 414 |
| MnlI | CCTC | 6 cut(s) | 183, 185, 334, 362, 439, 645 |
| Mph1103I | ATGCAT | 2 cut(s) | 608, 622 |
| MseI | TTAA | 8 cut(s) | 27, 38, 245, 272, 291, 393, 399, 527 |
| MslI | CAYNNNNRTG | 2 cut(s) | 300, 588 |
| MspA1I | CMGCKG | 1 cut(s) | 419 |
| MspI | CCGG | 1 cut(s) | 519 |
| MspR9I | CCNGG | 2 cut(s) | 485, 588 |
| MunI | CAATTG | 1 cut(s) | 338 |
| Mva1269I | GAATGC | 1 cut(s) | 608 |
| MvaI | CCWGG | 2 cut(s) | 485, 588 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 169 |
| NdeII | GATC | 4 cut(s) | 187, 544, 659, 663 |
| NlaIII | CATG | 2 cut(s) | 442, 610 |
| NsiI | ATGCAT | 2 cut(s) | 608, 622 |
| NspI | RCATGY | 1 cut(s) | 610 |
| PaeI | GCATGC | 1 cut(s) | 610 |
| PctI | GAATGC | 1 cut(s) | 608 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| PkrI | GCNGC | 1 cut(s) | 476 |
| PleI | GAGTC | 2 cut(s) | 380, 493 |
| PpsI | GAGTC | 2 cut(s) | 380, 493 |
| PshBI | ATTAAT | 2 cut(s) | 27, 38 |
| Psp6I | CCWGG | 2 cut(s) | 483, 586 |
| PspGI | CCWGG | 2 cut(s) | 483, 586 |
| PspPI | GGNCC | 1 cut(s) | 472 |
| PvuII | CAGCTG | 1 cut(s) | 419 |
| RsaI | GTAC | 1 cut(s) | 94 |
| RsaNI | GTAC | 1 cut(s) | 93 |
| RseI | CAYNNNNRTG | 2 cut(s) | 300, 588 |
| SaqAI | TTAA | 8 cut(s) | 27, 38, 245, 272, 291, 393, 399, 527 |
| SatI | GCNGC | 1 cut(s) | 475 |
| Sau3AI | GATC | 4 cut(s) | 187, 544, 659, 663 |
| Sau96I | GGNCC | 1 cut(s) | 472 |
| SchI | GAGTC | 2 cut(s) | 381, 493 |
| ScrFI | CCNGG | 2 cut(s) | 485, 588 |
| SfaNI | GCATC | 1 cut(s) | 607 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 300, 588 |
| SphI | GCATGC | 1 cut(s) | 610 |
| Sse9I | AATT | 7 cut(s) | 39, 167, 223, 246, 338, 354, 644 |
| SsiI | CCGC | 2 cut(s) | 152, 475 |
| SspMI | CTAG | 2 cut(s) | 261, 366 |
| StyD4I | CCNGG | 2 cut(s) | 483, 586 |
| TaaI | ACNGT | 2 cut(s) | 350, 553 |
| TaiI | ACGT | 1 cut(s) | 90 |
| TaqI | TCGA | 2 cut(s) | 190, 662 |
| TasI | AATT | 7 cut(s) | 39, 167, 223, 246, 338, 354, 644 |
| TatI | WGTACW | 1 cut(s) | 92 |
| TauI | GCSGC | 1 cut(s) | 477 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| Tru1I | TTAA | 8 cut(s) | 27, 38, 245, 272, 291, 393, 399, 527 |
| Tru9I | TTAA | 8 cut(s) | 27, 38, 245, 272, 291, 393, 399, 527 |
| TscAI | CASTG | 1 cut(s) | 154 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 154 |
| VspI | ATTAAT | 2 cut(s) | 27, 38 |
| XapI | RAATTY | 1 cut(s) | 644 |
| XceI | RCATGY | 1 cut(s) | 610 |
| XspI | CTAG | 2 cut(s) | 261, 366 |
| Zsp2I | ATGCAT | 2 cut(s) | 608, 622 |