transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 23 |
| Acc65I | GGTACC | 1 cut(s) | 51 |
| AccB1I | GGYRCC | 2 cut(s) | 51, 382 |
| AccI | GTMKAC | 2 cut(s) | 221, 320 |
| AciI | CCGC | 1 cut(s) | 644 |
| AclWI | GGATC | 1 cut(s) | 216 |
| AcoI | YGGCCR | 1 cut(s) | 725 |
| AcsI | RAATTY | 3 cut(s) | 231, 328, 734 |
| AfaI | GTAC | 2 cut(s) | 53, 309 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 691 |
| AgsI | TTSAA | 4 cut(s) | 31, 41, 327, 421 |
| AjiI | CACGTC | 1 cut(s) | 691 |
| AluBI | AGCT | 3 cut(s) | 27, 44, 314 |
| AluI | AGCT | 3 cut(s) | 27, 44, 314 |
| Alw21I | GWGCWC | 1 cut(s) | 417 |
| AlwI | GGATC | 1 cut(s) | 216 |
| AoxI | GGCC | 2 cut(s) | 279, 725 |
| ApeKI | GCWGC | 1 cut(s) | 467 |
| ApoI | RAATTY | 3 cut(s) | 231, 328, 734 |
| Asp718I | GGTACC | 1 cut(s) | 51 |
| AspS9I | GGNCC | 1 cut(s) | 280 |
| AsuHPI | GGTGA | 2 cut(s) | 291, 673 |
| BaeGI | GKGCMC | 1 cut(s) | 608 |
| BanI | GGYRCC | 2 cut(s) | 51, 382 |
| BbsI | GAAGAC | 1 cut(s) | 141 |
| Bbv12I | GWGCWC | 1 cut(s) | 417 |
| BbvI | GCAGC | 1 cut(s) | 479 |
| BccI | CCATC | 5 cut(s) | 5, 185, 271, 622, 646 |
| BciVI | GTATCC | 2 cut(s) | 103, 599 |
| BfuI | GTATCC | 2 cut(s) | 103, 599 |
| BisI | GCNGC | 1 cut(s) | 468 |
| BlsI | GCNGC | 1 cut(s) | 469 |
| BmgBI | CACGTC | 1 cut(s) | 691 |
| BmgT120I | GGNCC | 1 cut(s) | 280 |
| BmiI | GGNNCC | 3 cut(s) | 53, 282, 384 |
| BmsI | GCATC | 3 cut(s) | 109, 283, 592 |
| BpiI | GAAGAC | 1 cut(s) | 141 |
| BpuEI | CTTGAG | 2 cut(s) | 128, 293 |
| Bsa29I | ATCGAT | 2 cut(s) | 185, 189 |
| BsaBI | GATNNNNATC | 1 cut(s) | 195 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 691 |
| Bse3DI | GCAATG | 1 cut(s) | 479 |
| Bse8I | GATNNNNATC | 1 cut(s) | 195 |
| BseCI | ATCGAT | 2 cut(s) | 185, 189 |
| BseGI | GGATG | 1 cut(s) | 33 |
| BseJI | GATNNNNATC | 1 cut(s) | 195 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 691 |
| BseMI | GCAATG | 1 cut(s) | 479 |
| BseMII | CTCAG | 1 cut(s) | 239 |
| BseRI | GAGGAG | 2 cut(s) | 503, 506 |
| BseSI | GKGCMC | 1 cut(s) | 608 |
| BseXI | GCAGC | 1 cut(s) | 479 |
| BsgI | GTGCAG | 1 cut(s) | 125 |
| Bsh1285I | CGRYCG | 1 cut(s) | 189 |
| BshFI | GGCC | 2 cut(s) | 281, 727 |
| BshNI | GGYRCC | 2 cut(s) | 51, 382 |
| BshVI | ATCGAT | 2 cut(s) | 185, 189 |
| BsiEI | CGRYCG | 1 cut(s) | 189 |
| BsiHKAI | GWGCWC | 1 cut(s) | 417 |
| BsiSI | CCGG | 1 cut(s) | 410 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 691 |
| BsnI | GGCC | 2 cut(s) | 281, 727 |
| Bsp1286I | GDGCHC | 2 cut(s) | 417, 608 |
| Bsp143I | GATC | 2 cut(s) | 186, 208 |
| BspACI | CCGC | 1 cut(s) | 644 |
| BspANI | GGCC | 2 cut(s) | 281, 727 |
| BspCNI | CTCAG | 1 cut(s) | 238 |
| BspDI | ATCGAT | 2 cut(s) | 185, 189 |
| BspLI | GGNNCC | 3 cut(s) | 53, 282, 384 |
| BspPI | GGATC | 1 cut(s) | 216 |
| BspT107I | GGYRCC | 2 cut(s) | 51, 382 |
| BsrDI | GCAATG | 1 cut(s) | 479 |
| BssMI | GATC | 2 cut(s) | 186, 208 |
| BssNAI | GTATAC | 1 cut(s) | 321 |
| Bst1107I | GTATAC | 1 cut(s) | 321 |
| Bst6I | CTCTTC | 2 cut(s) | 345, 594 |
| BstDEI | CTNAG | 3 cut(s) | 200, 225, 315 |
| BstF5I | GGATG | 1 cut(s) | 33 |
| BstKTI | GATC | 2 cut(s) | 189, 211 |
| BstMBI | GATC | 2 cut(s) | 186, 208 |
| BstMCI | CGRYCG | 1 cut(s) | 189 |
| BstSLI | GKGCMC | 1 cut(s) | 608 |
| BstV1I | GCAGC | 1 cut(s) | 479 |
| BstV2I | GAAGAC | 1 cut(s) | 141 |
| BstZ17I | GTATAC | 1 cut(s) | 321 |
| Bsu15I | ATCGAT | 2 cut(s) | 185, 189 |
| BsuI | GTATCC | 2 cut(s) | 103, 599 |
| BsuRI | GGCC | 2 cut(s) | 281, 727 |
| BsuTUI | ATCGAT | 2 cut(s) | 185, 189 |
| BtrI | CACGTC | 1 cut(s) | 691 |
| BtsCI | GGATG | 1 cut(s) | 33 |
| Cfr13I | GGNCC | 1 cut(s) | 280 |
| ClaI | ATCGAT | 2 cut(s) | 185, 189 |
| CseI | GACGC | 1 cut(s) | 146 |
| Csp6I | GTAC | 2 cut(s) | 52, 308 |
| CviAII | CATG | 3 cut(s) | 243, 260, 537 |
| CviQI | GTAC | 2 cut(s) | 52, 308 |
| DdeI | CTNAG | 3 cut(s) | 200, 225, 315 |
| DpnI | GATC | 2 cut(s) | 188, 210 |
| DpnII | GATC | 2 cut(s) | 186, 208 |
| EaeI | YGGCCR | 1 cut(s) | 725 |
| Eam1104I | CTCTTC | 2 cut(s) | 345, 594 |
| EarI | CTCTTC | 2 cut(s) | 345, 594 |
| EciI | GGCGGA | 1 cut(s) | 633 |
| EcoT22I | ATGCAT | 1 cut(s) | 585 |
| FaeI | CATG | 3 cut(s) | 246, 263, 540 |
| FatI | CATG | 3 cut(s) | 242, 259, 536 |
| FblI | GTMKAC | 2 cut(s) | 221, 320 |
| Fnu4HI | GCNGC | 1 cut(s) | 468 |
| FokI | GGATG | 1 cut(s) | 20 |
| Fsp4HI | GCNGC | 1 cut(s) | 468 |
| GluI | GCNGC | 1 cut(s) | 468 |
| HaeIII | GGCC | 2 cut(s) | 281, 727 |
| HapII | CCGG | 1 cut(s) | 410 |
| HgaI | GACGC | 1 cut(s) | 146 |
| Hin1II | CATG | 3 cut(s) | 246, 263, 540 |
| HindIII | AAGCTT | 1 cut(s) | 25 |
| HinfI | GANTC | 3 cut(s) | 196, 239, 376 |
| HpaII | CCGG | 1 cut(s) | 410 |
| HphI | GGTGA | 2 cut(s) | 291, 673 |
| Hpy166II | GTNNAC | 2 cut(s) | 222, 321 |
| Hpy188I | TCNGA | 4 cut(s) | 61, 228, 238, 715 |
| Hpy188III | TCNNGA | 2 cut(s) | 145, 618 |
| Hpy8I | GTNNAC | 2 cut(s) | 222, 321 |
| Hpy99I | CGWCG | 1 cut(s) | 749 |
| HpyAV | CCTTC | 3 cut(s) | 66, 579, 751 |
| HpyCH4IV | ACGT | 1 cut(s) | 690 |
| HpyCH4V | TGCA | 5 cut(s) | 106, 122, 467, 484, 583 |
| HpyF3I | CTNAG | 3 cut(s) | 200, 225, 315 |
| HpySE526I | ACGT | 1 cut(s) | 690 |
| Hsp92II | CATG | 3 cut(s) | 246, 263, 540 |
| KpnI | GGTACC | 1 cut(s) | 55 |
| Kzo9I | GATC | 2 cut(s) | 186, 208 |
| LmnI | GCTCC | 2 cut(s) | 412, 540 |
| LpnPI | CCDG | 5 cut(s) | 92, 324, 365, 423, 470 |
| Lsp1109I | GCAGC | 1 cut(s) | 479 |
| LweI | GCATC | 3 cut(s) | 109, 283, 592 |
| MaeII | ACGT | 1 cut(s) | 690 |
| MalI | GATC | 2 cut(s) | 188, 210 |
| MboI | GATC | 2 cut(s) | 186, 208 |
| MboII | GAAGA | 4 cut(s) | 146, 332, 611, 676 |
| MhlI | GDGCHC | 2 cut(s) | 417, 608 |
| MluCI | AATT | 7 cut(s) | 18, 179, 231, 328, 389, 497, 734 |
| Mph1103I | ATGCAT | 1 cut(s) | 585 |
| MseI | TTAA | 3 cut(s) | 512, 555, 639 |
| MspI | CCGG | 1 cut(s) | 410 |
| NdeII | GATC | 2 cut(s) | 186, 208 |
| NlaIII | CATG | 3 cut(s) | 246, 263, 540 |
| NlaIV | GGNNCC | 3 cut(s) | 53, 282, 384 |
| NsiI | ATGCAT | 1 cut(s) | 585 |
| PfeI | GAWTC | 3 cut(s) | 196, 239, 376 |
| PkrI | GCNGC | 1 cut(s) | 469 |
| Ple19I | CGATCG | 1 cut(s) | 189 |
| PsiI | TTATAA | 1 cut(s) | 23 |
| PspN4I | GGNNCC | 3 cut(s) | 53, 282, 384 |
| PspPI | GGNCC | 1 cut(s) | 280 |
| PvuI | CGATCG | 1 cut(s) | 189 |
| RsaI | GTAC | 2 cut(s) | 53, 309 |
| RsaNI | GTAC | 2 cut(s) | 52, 308 |
| SaqAI | TTAA | 3 cut(s) | 512, 555, 639 |
| SatI | GCNGC | 1 cut(s) | 468 |
| Sau3AI | GATC | 2 cut(s) | 186, 208 |
| Sau96I | GGNCC | 1 cut(s) | 280 |
| SduI | GDGCHC | 2 cut(s) | 417, 608 |
| SfaNI | GCATC | 3 cut(s) | 109, 283, 592 |
| SmlI | CTYRAG | 2 cut(s) | 143, 272 |
| SmoI | CTYRAG | 2 cut(s) | 143, 272 |
| Sse9I | AATT | 7 cut(s) | 18, 179, 231, 328, 389, 497, 734 |
| SsiI | CCGC | 1 cut(s) | 644 |
| TaiI | ACGT | 1 cut(s) | 693 |
| TaqI | TCGA | 2 cut(s) | 185, 189 |
| TasI | AATT | 7 cut(s) | 18, 179, 231, 328, 389, 497, 734 |
| TfiI | GAWTC | 3 cut(s) | 196, 239, 376 |
| Tru1I | TTAA | 3 cut(s) | 512, 555, 639 |
| Tru9I | TTAA | 3 cut(s) | 512, 555, 639 |
| TseI | GCWGC | 1 cut(s) | 467 |
| TspDTI | ATGAA | 4 cut(s) | 231, 322, 369, 468 |
| TspGWI | ACGGA | 1 cut(s) | 562 |
| XapI | RAATTY | 3 cut(s) | 231, 328, 734 |
| XmiI | GTMKAC | 2 cut(s) | 221, 320 |
| Zsp2I | ATGCAT | 1 cut(s) | 585 |