transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 179 |
| Acc36I | ACCTGC | 1 cut(s) | 179 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 308 |
| AclWI | GGATC | 2 cut(s) | 536, 549 |
| AcsI | RAATTY | 1 cut(s) | 351 |
| AfaI | GTAC | 1 cut(s) | 644 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 46, 308, 422 |
| AgsI | TTSAA | 6 cut(s) | 37, 254, 436, 650, 670, 749 |
| AjnI | CCWGG | 2 cut(s) | 307, 544 |
| AluBI | AGCT | 3 cut(s) | 450, 535, 803 |
| AluI | AGCT | 3 cut(s) | 450, 535, 803 |
| Alw26I | GTCTC | 1 cut(s) | 198 |
| AlwI | GGATC | 2 cut(s) | 536, 549 |
| AoxI | GGCC | 1 cut(s) | 273 |
| ApoI | RAATTY | 1 cut(s) | 351 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 431 |
| AspS9I | GGNCC | 1 cut(s) | 467 |
| AsuHPI | GGTGA | 1 cut(s) | 559 |
| AsuNHI | GCTAGC | 1 cut(s) | 614 |
| AvaII | GGWCC | 1 cut(s) | 467 |
| BamHI | GGATCC | 1 cut(s) | 541 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 792 |
| BbsI | GAAGAC | 1 cut(s) | 319 |
| BciT130I | CCWGG | 2 cut(s) | 309, 546 |
| BclI | TGATCA | 1 cut(s) | 175 |
| BcoDI | GTCTC | 1 cut(s) | 198 |
| BfaI | CTAG | 3 cut(s) | 615, 653, 743 |
| BfmI | CTRYAG | 1 cut(s) | 771 |
| BfuAI | ACCTGC | 1 cut(s) | 179 |
| Bme1390I | CCNGG | 2 cut(s) | 309, 546 |
| Bme18I | GGWCC | 1 cut(s) | 467 |
| BmgT120I | GGNCC | 1 cut(s) | 467 |
| BmiI | GGNNCC | 3 cut(s) | 89, 228, 543 |
| BmrFI | CCNGG | 2 cut(s) | 309, 546 |
| BmsI | GCATC | 2 cut(s) | 19, 627 |
| BmtI | GCTAGC | 1 cut(s) | 618 |
| BpiI | GAAGAC | 1 cut(s) | 319 |
| BpuEI | CTTGAG | 2 cut(s) | 183, 521 |
| Bsa29I | ATCGAT | 1 cut(s) | 814 |
| BsaJI | CCNNGG | 1 cut(s) | 307 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 46, 308, 422 |
| Bse118I | RCCGGY | 1 cut(s) | 415 |
| Bse3DI | GCAATG | 2 cut(s) | 160, 603 |
| BseBI | CCWGG | 2 cut(s) | 309, 546 |
| BseCI | ATCGAT | 1 cut(s) | 814 |
| BseDI | CCNNGG | 1 cut(s) | 307 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 46, 308, 422 |
| BseMI | GCAATG | 2 cut(s) | 160, 603 |
| BseMII | CTCAG | 1 cut(s) | 483 |
| BsgI | GTGCAG | 1 cut(s) | 525 |
| Bsh1285I | CGRYCG | 1 cut(s) | 818 |
| BshFI | GGCC | 1 cut(s) | 275 |
| BshVI | ATCGAT | 1 cut(s) | 814 |
| BsiEI | CGRYCG | 1 cut(s) | 818 |
| BsiSI | CCGG | 1 cut(s) | 416 |
| BslFI | GGGAC | 1 cut(s) | 590 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 46, 308, 422 |
| BsmAI | GTCTC | 1 cut(s) | 198 |
| BsmFI | GGGAC | 1 cut(s) | 590 |
| BsmI | GAATGC | 1 cut(s) | 190 |
| BsnI | GGCC | 1 cut(s) | 275 |
| Bsp143I | GATC | 4 cut(s) | 175, 541, 704, 815 |
| BspANI | GGCC | 1 cut(s) | 275 |
| BspCNI | CTCAG | 1 cut(s) | 484 |
| BspDI | ATCGAT | 1 cut(s) | 814 |
| BspLI | GGNNCC | 3 cut(s) | 89, 228, 543 |
| BspMAI | CTGCAG | 1 cut(s) | 775 |
| BspMI | ACCTGC | 1 cut(s) | 179 |
| BspOI | GCTAGC | 1 cut(s) | 618 |
| BspPI | GGATC | 2 cut(s) | 536, 549 |
| BsrDI | GCAATG | 2 cut(s) | 160, 603 |
| BsrFI | RCCGGY | 1 cut(s) | 415 |
| BssAI | RCCGGY | 1 cut(s) | 415 |
| BssECI | CCNNGG | 1 cut(s) | 307 |
| BssMI | GATC | 4 cut(s) | 175, 541, 704, 815 |
| Bst2UI | CCWGG | 2 cut(s) | 309, 546 |
| BstC8I | GCNNGC | 5 cut(s) | 99, 329, 417, 616, 771 |
| BstDEI | CTNAG | 3 cut(s) | 119, 365, 492 |
| BstKTI | GATC | 4 cut(s) | 178, 544, 707, 818 |
| BstMAI | GTCTC | 1 cut(s) | 198 |
| BstMBI | GATC | 4 cut(s) | 175, 541, 704, 815 |
| BstMCI | CGRYCG | 1 cut(s) | 818 |
| BstNI | CCWGG | 2 cut(s) | 309, 546 |
| BstNSI | RCATGY | 1 cut(s) | 415 |
| BstSCI | CCNGG | 2 cut(s) | 307, 544 |
| BstSFI | CTRYAG | 1 cut(s) | 771 |
| BstV2I | GAAGAC | 1 cut(s) | 319 |
| BstX2I | RGATCY | 1 cut(s) | 541 |
| BstYI | RGATCY | 1 cut(s) | 541 |
| Bsu15I | ATCGAT | 1 cut(s) | 814 |
| BsuRI | GGCC | 1 cut(s) | 275 |
| BsuTUI | ATCGAT | 1 cut(s) | 814 |
| BtsIMutI | CAGTG | 1 cut(s) | 645 |
| BveI | ACCTGC | 1 cut(s) | 179 |
| Cac8I | GCNNGC | 5 cut(s) | 99, 329, 417, 616, 771 |
| Cfr10I | RCCGGY | 1 cut(s) | 415 |
| Cfr13I | GGNCC | 1 cut(s) | 467 |
| ClaI | ATCGAT | 1 cut(s) | 814 |
| Csp6I | GTAC | 1 cut(s) | 643 |
| CviAII | CATG | 5 cut(s) | 179, 236, 412, 473, 793 |
| CviJI | RGCY | 8 cut(s) | 66, 101, 234, 275, 450, 535, 674, 803 |
| CviKI_1 | RGCY | 8 cut(s) | 66, 101, 234, 275, 450, 535, 674, 803 |
| CviQI | GTAC | 1 cut(s) | 643 |
| DdeI | CTNAG | 3 cut(s) | 119, 365, 492 |
| DpnI | GATC | 4 cut(s) | 177, 543, 706, 817 |
| DpnII | GATC | 4 cut(s) | 175, 541, 704, 815 |
| Eco32I | GATATC | 1 cut(s) | 739 |
| Eco47I | GGWCC | 1 cut(s) | 467 |
| EcoRII | CCWGG | 2 cut(s) | 307, 544 |
| EcoRV | GATATC | 1 cut(s) | 739 |
| FaeI | CATG | 5 cut(s) | 182, 239, 415, 476, 796 |
| FaqI | GGGAC | 1 cut(s) | 590 |
| FatI | CATG | 5 cut(s) | 178, 235, 411, 472, 792 |
| FauNDI | CATATG | 1 cut(s) | 421 |
| FbaI | TGATCA | 1 cut(s) | 175 |
| FspBI | CTAG | 3 cut(s) | 615, 653, 743 |
| HaeIII | GGCC | 1 cut(s) | 275 |
| HapII | CCGG | 1 cut(s) | 416 |
| Hin1II | CATG | 5 cut(s) | 182, 239, 415, 476, 796 |
| HincII | GTYRAC | 1 cut(s) | 382 |
| HindII | GTYRAC | 1 cut(s) | 382 |
| HpaI | GTTAAC | 1 cut(s) | 382 |
| HpaII | CCGG | 1 cut(s) | 416 |
| HphI | GGTGA | 1 cut(s) | 559 |
| Hpy166II | GTNNAC | 2 cut(s) | 382, 643 |
| Hpy188I | TCNGA | 1 cut(s) | 493 |
| Hpy188III | TCNNGA | 1 cut(s) | 819 |
| Hpy8I | GTNNAC | 2 cut(s) | 382, 643 |
| HpyAV | CCTTC | 3 cut(s) | 472, 586, 656 |
| HpyCH4V | TGCA | 6 cut(s) | 26, 188, 506, 514, 698, 773 |
| HpyF3I | CTNAG | 3 cut(s) | 119, 365, 492 |
| Hsp92II | CATG | 5 cut(s) | 182, 239, 415, 476, 796 |
| KroI | GCCGGC | 1 cut(s) | 415 |
| KroNI | GCCGGC | 1 cut(s) | 417 |
| Ksp22I | TGATCA | 1 cut(s) | 175 |
| KspAI | GTTAAC | 1 cut(s) | 382 |
| Kzo9I | GATC | 4 cut(s) | 175, 541, 704, 815 |
| LmnI | GCTCC | 1 cut(s) | 808 |
| LpnPI | CCDG | 8 cut(s) | 174, 294, 317, 321, 429, 531, 558, 783 |
| LweI | GCATC | 2 cut(s) | 19, 627 |
| MaeI | CTAG | 3 cut(s) | 615, 653, 743 |
| MaeIII | GTNAC | 1 cut(s) | 193 |
| MalI | GATC | 4 cut(s) | 177, 543, 706, 817 |
| MboI | GATC | 4 cut(s) | 175, 541, 704, 815 |
| MboII | GAAGA | 5 cut(s) | 257, 324, 424, 746, 809 |
| MfeI | CAATTG | 1 cut(s) | 11 |
| MflI | RGATCY | 1 cut(s) | 541 |
| MluCI | AATT | 2 cut(s) | 11, 351 |
| MmeI | TCCRAC | 1 cut(s) | 768 |
| MnlI | CCTC | 4 cut(s) | 40, 217, 256, 716 |
| MroNI | GCCGGC | 1 cut(s) | 415 |
| MroXI | GAANNNNTTC | 1 cut(s) | 431 |
| MseI | TTAA | 5 cut(s) | 345, 381, 443, 626, 711 |
| MslI | CAYNNNNRTG | 1 cut(s) | 183 |
| MspI | CCGG | 1 cut(s) | 416 |
| MspR9I | CCNGG | 2 cut(s) | 309, 546 |
| MunI | CAATTG | 1 cut(s) | 11 |
| Mva1269I | GAATGC | 1 cut(s) | 190 |
| MvaI | CCWGG | 2 cut(s) | 309, 546 |
| NaeI | GCCGGC | 1 cut(s) | 417 |
| NdeI | CATATG | 1 cut(s) | 421 |
| NdeII | GATC | 4 cut(s) | 175, 541, 704, 815 |
| NgoMIV | GCCGGC | 1 cut(s) | 415 |
| NheI | GCTAGC | 1 cut(s) | 614 |
| NlaIII | CATG | 5 cut(s) | 182, 239, 415, 476, 796 |
| NlaIV | GGNNCC | 3 cut(s) | 89, 228, 543 |
| NmeAIII | GCCGAG | 1 cut(s) | 301 |
| NspI | RCATGY | 1 cut(s) | 415 |
| PaqCI | CACCTGC | 1 cut(s) | 179 |
| PctI | GAATGC | 1 cut(s) | 190 |
| PdiI | GCCGGC | 1 cut(s) | 417 |
| PdmI | GAANNNNTTC | 1 cut(s) | 431 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 308 |
| PfoI | TCCNGGA | 1 cut(s) | 544 |
| Ple19I | CGATCG | 1 cut(s) | 818 |
| Psp6I | CCWGG | 2 cut(s) | 307, 544 |
| PspGI | CCWGG | 2 cut(s) | 307, 544 |
| PspN4I | GGNNCC | 3 cut(s) | 89, 228, 543 |
| PspPI | GGNCC | 1 cut(s) | 467 |
| PstI | CTGCAG | 1 cut(s) | 775 |
| PsuI | RGATCY | 1 cut(s) | 541 |
| PvuI | CGATCG | 1 cut(s) | 818 |
| RsaI | GTAC | 1 cut(s) | 644 |
| RsaNI | GTAC | 1 cut(s) | 643 |
| RseI | CAYNNNNRTG | 1 cut(s) | 183 |
| SaqAI | TTAA | 5 cut(s) | 345, 381, 443, 626, 711 |
| Sau3AI | GATC | 4 cut(s) | 175, 541, 704, 815 |
| Sau96I | GGNCC | 1 cut(s) | 467 |
| ScrFI | CCNGG | 2 cut(s) | 309, 546 |
| SfaNI | GCATC | 2 cut(s) | 19, 627 |
| SfcI | CTRYAG | 1 cut(s) | 771 |
| SinI | GGWCC | 1 cut(s) | 467 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 183 |
| SmlI | CTYRAG | 2 cut(s) | 198, 536 |
| SmoI | CTYRAG | 2 cut(s) | 198, 536 |
| Sse9I | AATT | 2 cut(s) | 11, 351 |
| SspI | AATATT | 1 cut(s) | 765 |
| SspMI | CTAG | 3 cut(s) | 615, 653, 743 |
| StyD4I | CCNGG | 2 cut(s) | 307, 544 |
| TaqI | TCGA | 1 cut(s) | 814 |
| TasI | AATT | 2 cut(s) | 11, 351 |
| Tru1I | TTAA | 5 cut(s) | 345, 381, 443, 626, 711 |
| Tru9I | TTAA | 5 cut(s) | 345, 381, 443, 626, 711 |
| TscAI | CASTG | 1 cut(s) | 645 |
| TspDTI | ATGAA | 3 cut(s) | 171, 183, 675 |
| TspRI | CASTG | 1 cut(s) | 645 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 308 |
| VpaK11BI | GGWCC | 1 cut(s) | 467 |
| XapI | RAATTY | 1 cut(s) | 351 |
| XceI | RCATGY | 1 cut(s) | 415 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 47 |
| XmnI | GAANNNNTTC | 1 cut(s) | 431 |
| XspI | CTAG | 3 cut(s) | 615, 653, 743 |