transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 247 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AciI | CCGC | 1 cut(s) | 332 |
| AcsI | RAATTY | 2 cut(s) | 118, 223 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 391 |
| AgsI | TTSAA | 2 cut(s) | 98, 382 |
| AluBI | AGCT | 1 cut(s) | 80 |
| AluI | AGCT | 1 cut(s) | 80 |
| Alw26I | GTCTC | 1 cut(s) | 344 |
| Ama87I | CYCGRG | 1 cut(s) | 86 |
| AoxI | GGCC | 2 cut(s) | 134, 536 |
| ApoI | RAATTY | 2 cut(s) | 118, 223 |
| AspS9I | GGNCC | 1 cut(s) | 536 |
| AvaI | CYCGRG | 1 cut(s) | 86 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BccI | CCATC | 1 cut(s) | 76 |
| BciVI | GTATCC | 1 cut(s) | 250 |
| BclI | TGATCA | 1 cut(s) | 520 |
| BcoDI | GTCTC | 1 cut(s) | 344 |
| BfaI | CTAG | 2 cut(s) | 72, 251 |
| BfuAI | ACCTGC | 1 cut(s) | 247 |
| BfuI | GTATCC | 1 cut(s) | 250 |
| BisI | GCNGC | 1 cut(s) | 333 |
| BlsI | GCNGC | 1 cut(s) | 334 |
| BmeT110I | CYCGRG | 1 cut(s) | 86 |
| BmgT120I | GGNCC | 1 cut(s) | 536 |
| BmiI | GGNNCC | 2 cut(s) | 6, 434 |
| BmsI | GCATC | 1 cut(s) | 364 |
| BpuEI | CTTGAG | 1 cut(s) | 154 |
| BsaJI | CCNNGG | 1 cut(s) | 137 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 391 |
| Bse3DI | GCAATG | 1 cut(s) | 505 |
| BseDI | CCNNGG | 1 cut(s) | 137 |
| BseGI | GGATG | 1 cut(s) | 184 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 391 |
| BseMI | GCAATG | 1 cut(s) | 505 |
| BshFI | GGCC | 2 cut(s) | 136, 538 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiHKCI | CYCGRG | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 391 |
| BsmAI | GTCTC | 1 cut(s) | 344 |
| BsmI | GAATGC | 1 cut(s) | 535 |
| BsnI | GGCC | 2 cut(s) | 136, 538 |
| BsoBI | CYCGRG | 1 cut(s) | 86 |
| Bsp143I | GATC | 2 cut(s) | 181, 520 |
| BspACI | CCGC | 1 cut(s) | 332 |
| BspANI | GGCC | 2 cut(s) | 136, 538 |
| BspHI | TCATGA | 1 cut(s) | 114 |
| BspLI | GGNNCC | 2 cut(s) | 6, 434 |
| BspMI | ACCTGC | 1 cut(s) | 247 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BsrDI | GCAATG | 1 cut(s) | 505 |
| BssECI | CCNNGG | 1 cut(s) | 137 |
| BssMI | GATC | 2 cut(s) | 181, 520 |
| BssT1I | CCWWGG | 1 cut(s) | 137 |
| Bst4CI | ACNGT | 1 cut(s) | 262 |
| BstC8I | GCNNGC | 1 cut(s) | 444 |
| BstDEI | CTNAG | 1 cut(s) | 464 |
| BstF5I | GGATG | 1 cut(s) | 184 |
| BstKTI | GATC | 2 cut(s) | 184, 523 |
| BstMAI | GTCTC | 1 cut(s) | 344 |
| BstMBI | GATC | 2 cut(s) | 181, 520 |
| BsuI | GTATCC | 1 cut(s) | 250 |
| BsuRI | GGCC | 2 cut(s) | 136, 538 |
| BtsCI | GGATG | 1 cut(s) | 184 |
| BveI | ACCTGC | 1 cut(s) | 247 |
| Cac8I | GCNNGC | 1 cut(s) | 444 |
| CciI | TCATGA | 1 cut(s) | 114 |
| Cfr13I | GGNCC | 1 cut(s) | 536 |
| CviAII | CATG | 4 cut(s) | 115, 198, 524, 540 |
| CviJI | RGCY | 8 cut(s) | 48, 80, 136, 275, 335, 411, 446, 538 |
| CviKI_1 | RGCY | 8 cut(s) | 48, 80, 136, 275, 335, 411, 446, 538 |
| DdeI | CTNAG | 1 cut(s) | 464 |
| DpnI | GATC | 2 cut(s) | 183, 522 |
| DpnII | GATC | 2 cut(s) | 181, 520 |
| Eco130I | CCWWGG | 1 cut(s) | 137 |
| Eco88I | CYCGRG | 1 cut(s) | 86 |
| EcoRI | GAATTC | 1 cut(s) | 118 |
| EcoT14I | CCWWGG | 1 cut(s) | 137 |
| ErhI | CCWWGG | 1 cut(s) | 137 |
| FaeI | CATG | 4 cut(s) | 118, 201, 527, 543 |
| FaiI | YATR | 8 cut(s) | 41, 93, 116, 163, 165, 199, 525, 541 |
| FatI | CATG | 4 cut(s) | 114, 197, 523, 539 |
| FbaI | TGATCA | 1 cut(s) | 520 |
| Fnu4HI | GCNGC | 1 cut(s) | 333 |
| FokI | GGATG | 1 cut(s) | 171 |
| Fsp4HI | GCNGC | 1 cut(s) | 333 |
| FspBI | CTAG | 2 cut(s) | 72, 251 |
| GluI | GCNGC | 1 cut(s) | 333 |
| HaeIII | GGCC | 2 cut(s) | 136, 538 |
| Hin1II | CATG | 4 cut(s) | 118, 201, 527, 543 |
| HindIII | AAGCTT | 1 cut(s) | 78 |
| HinfI | GANTC | 1 cut(s) | 515 |
| Hpy166II | GTNNAC | 1 cut(s) | 109 |
| Hpy188I | TCNGA | 1 cut(s) | 520 |
| Hpy188III | TCNNGA | 4 cut(s) | 86, 98, 115, 251 |
| Hpy8I | GTNNAC | 1 cut(s) | 109 |
| HpyCH4III | ACNGT | 1 cut(s) | 262 |
| HpyCH4V | TGCA | 4 cut(s) | 36, 289, 371, 533 |
| HpyF3I | CTNAG | 1 cut(s) | 464 |
| Hsp92II | CATG | 4 cut(s) | 118, 201, 527, 543 |
| Ksp22I | TGATCA | 1 cut(s) | 520 |
| Kzo9I | GATC | 2 cut(s) | 181, 520 |
| LpnPI | CCDG | 2 cut(s) | 252, 519 |
| LweI | GCATC | 1 cut(s) | 364 |
| MaeI | CTAG | 2 cut(s) | 72, 251 |
| MaeIII | GTNAC | 2 cut(s) | 505, 542 |
| MalI | GATC | 2 cut(s) | 183, 522 |
| MboI | GATC | 2 cut(s) | 181, 520 |
| MboII | GAAGA | 1 cut(s) | 214 |
| MfeI | CAATTG | 1 cut(s) | 356 |
| MluCI | AATT | 5 cut(s) | 118, 215, 223, 290, 356 |
| MmeI | TCCRAC | 5 cut(s) | 155, 253, 319, 343, 376 |
| MnlI | CCTC | 4 cut(s) | 122, 203, 247, 385 |
| MseI | TTAA | 1 cut(s) | 264 |
| MslI | CAYNNNNRTG | 1 cut(s) | 528 |
| MunI | CAATTG | 1 cut(s) | 356 |
| Mva1269I | GAATGC | 1 cut(s) | 535 |
| NdeII | GATC | 2 cut(s) | 181, 520 |
| NlaIII | CATG | 4 cut(s) | 118, 201, 527, 543 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 434 |
| PagI | TCATGA | 1 cut(s) | 114 |
| PctI | GAATGC | 1 cut(s) | 535 |
| PfeI | GAWTC | 1 cut(s) | 515 |
| PkrI | GCNGC | 1 cut(s) | 334 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 434 |
| PspPI | GGNCC | 1 cut(s) | 536 |
| RseI | CAYNNNNRTG | 1 cut(s) | 528 |
| SaqAI | TTAA | 1 cut(s) | 264 |
| SatI | GCNGC | 1 cut(s) | 333 |
| Sau3AI | GATC | 2 cut(s) | 181, 520 |
| Sau96I | GGNCC | 1 cut(s) | 536 |
| SetI | ASST | 6 cut(s) | 82, 114, 195, 241, 287, 396 |
| SfaNI | GCATC | 1 cut(s) | 364 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 528 |
| SmlI | CTYRAG | 1 cut(s) | 169 |
| SmoI | CTYRAG | 1 cut(s) | 169 |
| Sse9I | AATT | 5 cut(s) | 118, 215, 223, 290, 356 |
| SsiI | CCGC | 1 cut(s) | 332 |
| SspMI | CTAG | 2 cut(s) | 72, 251 |
| StyI | CCWWGG | 1 cut(s) | 137 |
| TaaI | ACNGT | 1 cut(s) | 262 |
| TasI | AATT | 5 cut(s) | 118, 215, 223, 290, 356 |
| TauI | GCSGC | 1 cut(s) | 335 |
| TfiI | GAWTC | 1 cut(s) | 515 |
| Tru1I | TTAA | 1 cut(s) | 264 |
| Tru9I | TTAA | 1 cut(s) | 264 |
| TspDTI | ATGAA | 4 cut(s) | 33, 131, 516, 528 |
| XapI | RAATTY | 2 cut(s) | 118, 223 |
| XbaI | TCTAGA | 1 cut(s) | 250 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 392 |
| XspI | CTAG | 2 cut(s) | 72, 251 |