transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 107 |
| AclWI | GGATC | 1 cut(s) | 915 |
| AcsI | RAATTY | 2 cut(s) | 339, 621 |
| AcuI | CTGAAG | 2 cut(s) | 776, 879 |
| AfaI | GTAC | 1 cut(s) | 294 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 359 |
| AflII | CTTAAG | 1 cut(s) | 631 |
| AgeI | ACCGGT | 1 cut(s) | 58 |
| AgsI | TTSAA | 9 cut(s) | 68, 157, 178, 307, 346, 552, 562, 620, 652 |
| AleI | CACNNNNGTG | 1 cut(s) | 76 |
| AluBI | AGCT | 4 cut(s) | 43, 256, 739, 893 |
| AluI | AGCT | 4 cut(s) | 43, 256, 739, 893 |
| Alw21I | GWGCWC | 1 cut(s) | 853 |
| Alw26I | GTCTC | 3 cut(s) | 197, 674, 680 |
| AlwI | GGATC | 1 cut(s) | 915 |
| AoxI | GGCC | 1 cut(s) | 122 |
| ApeKI | GCWGC | 3 cut(s) | 256, 259, 520 |
| ApoI | RAATTY | 2 cut(s) | 339, 621 |
| AseI | ATTAAT | 1 cut(s) | 378 |
| AsiGI | ACCGGT | 1 cut(s) | 58 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 42 |
| AspLEI | GCGC | 1 cut(s) | 459 |
| AspS9I | GGNCC | 1 cut(s) | 578 |
| AsuC2I | CCSGG | 1 cut(s) | 389 |
| AsuHPI | GGTGA | 4 cut(s) | 206, 257, 299, 667 |
| AvaII | GGWCC | 1 cut(s) | 578 |
| BbsI | GAAGAC | 2 cut(s) | 764, 927 |
| Bbv12I | GWGCWC | 1 cut(s) | 853 |
| BbvI | GCAGC | 3 cut(s) | 243, 246, 507 |
| BccI | CCATC | 1 cut(s) | 568 |
| BcnI | CCSGG | 1 cut(s) | 389 |
| BcoDI | GTCTC | 3 cut(s) | 197, 674, 680 |
| BfrI | CTTAAG | 1 cut(s) | 631 |
| BisI | GCNGC | 3 cut(s) | 257, 260, 521 |
| BlsI | GCNGC | 3 cut(s) | 258, 261, 522 |
| Bme1390I | CCNGG | 1 cut(s) | 389 |
| Bme18I | GGWCC | 1 cut(s) | 578 |
| BmgT120I | GGNCC | 1 cut(s) | 578 |
| BmiI | GGNNCC | 2 cut(s) | 83, 579 |
| BmrFI | CCNGG | 1 cut(s) | 389 |
| BmsI | GCATC | 1 cut(s) | 43 |
| BpiI | GAAGAC | 2 cut(s) | 764, 927 |
| BpuEI | CTTGAG | 1 cut(s) | 656 |
| BpuMI | CCSGG | 1 cut(s) | 389 |
| BsaWI | WCCGGW | 1 cut(s) | 58 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 359 |
| Bse118I | RCCGGY | 1 cut(s) | 58 |
| Bse1I | ACTGG | 2 cut(s) | 212, 709 |
| BseGI | GGATG | 1 cut(s) | 579 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 359 |
| BseNI | ACTGG | 2 cut(s) | 212, 709 |
| BseRI | GAGGAG | 1 cut(s) | 713 |
| BseXI | GCAGC | 3 cut(s) | 243, 246, 507 |
| BshFI | GGCC | 1 cut(s) | 124 |
| BshTI | ACCGGT | 1 cut(s) | 58 |
| BsiHKAI | GWGCWC | 1 cut(s) | 853 |
| BsiSI | CCGG | 2 cut(s) | 59, 388 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 359 |
| BsmAI | GTCTC | 3 cut(s) | 197, 674, 680 |
| BsmI | GAATGC | 1 cut(s) | 442 |
| BsnI | GGCC | 1 cut(s) | 124 |
| Bsp1286I | GDGCHC | 1 cut(s) | 853 |
| Bsp143I | GATC | 1 cut(s) | 907 |
| BspANI | GGCC | 1 cut(s) | 124 |
| BspHI | TCATGA | 1 cut(s) | 472 |
| BspLI | GGNNCC | 2 cut(s) | 83, 579 |
| BspPI | GGATC | 1 cut(s) | 915 |
| BspTI | CTTAAG | 1 cut(s) | 631 |
| BsrFI | RCCGGY | 1 cut(s) | 58 |
| BsrI | ACTGG | 2 cut(s) | 212, 709 |
| BssAI | RCCGGY | 1 cut(s) | 58 |
| BssMI | GATC | 1 cut(s) | 907 |
| Bst4CI | ACNGT | 1 cut(s) | 162 |
| Bst6I | CTCTTC | 1 cut(s) | 234 |
| BstAFI | CTTAAG | 1 cut(s) | 631 |
| BstC8I | GCNNGC | 1 cut(s) | 138 |
| BstDEI | CTNAG | 2 cut(s) | 539, 769 |
| BstF5I | GGATG | 1 cut(s) | 579 |
| BstHHI | GCGC | 1 cut(s) | 459 |
| BstKTI | GATC | 1 cut(s) | 910 |
| BstMAI | GTCTC | 3 cut(s) | 197, 674, 680 |
| BstMBI | GATC | 1 cut(s) | 907 |
| BstSCI | CCNGG | 1 cut(s) | 387 |
| BstV1I | GCAGC | 3 cut(s) | 243, 246, 507 |
| BstV2I | GAAGAC | 2 cut(s) | 764, 927 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 78 |
| BsuRI | GGCC | 1 cut(s) | 124 |
| BtsCI | GGATG | 1 cut(s) | 579 |
| BtsIMutI | CAGTG | 1 cut(s) | 716 |
| Cac8I | GCNNGC | 1 cut(s) | 138 |
| CciI | TCATGA | 1 cut(s) | 472 |
| CfoI | GCGC | 1 cut(s) | 459 |
| Cfr10I | RCCGGY | 1 cut(s) | 58 |
| Cfr13I | GGNCC | 1 cut(s) | 578 |
| Csp6I | GTAC | 1 cut(s) | 293 |
| CspAI | ACCGGT | 1 cut(s) | 58 |
| CviAII | CATG | 2 cut(s) | 473, 608 |
| CviQI | GTAC | 1 cut(s) | 293 |
| DdeI | CTNAG | 2 cut(s) | 539, 769 |
| DpnI | GATC | 1 cut(s) | 909 |
| DpnII | GATC | 1 cut(s) | 907 |
| Eam1104I | CTCTTC | 1 cut(s) | 234 |
| EarI | CTCTTC | 1 cut(s) | 234 |
| Eco147I | AGGCCT | 1 cut(s) | 124 |
| Eco47I | GGWCC | 1 cut(s) | 578 |
| Eco57I | CTGAAG | 2 cut(s) | 776, 879 |
| EcoO109I | RGGNCCY | 1 cut(s) | 578 |
| FaeI | CATG | 2 cut(s) | 476, 611 |
| FaiI | YATR | 9 cut(s) | 183, 368, 370, 432, 474, 526, 609, 746, 870 |
| FatI | CATG | 2 cut(s) | 472, 607 |
| FblI | GTMKAC | 1 cut(s) | 107 |
| Fnu4HI | GCNGC | 3 cut(s) | 257, 260, 521 |
| FokI | GGATG | 1 cut(s) | 586 |
| Fsp4HI | GCNGC | 3 cut(s) | 257, 260, 521 |
| GlaI | GCGC | 1 cut(s) | 458 |
| GluI | GCNGC | 3 cut(s) | 257, 260, 521 |
| HaeIII | GGCC | 1 cut(s) | 124 |
| HapII | CCGG | 2 cut(s) | 59, 388 |
| HhaI | GCGC | 1 cut(s) | 459 |
| Hin1II | CATG | 2 cut(s) | 476, 611 |
| Hin6I | GCGC | 1 cut(s) | 457 |
| HinP1I | GCGC | 1 cut(s) | 457 |
| HindIII | AAGCTT | 1 cut(s) | 41 |
| HinfI | GANTC | 3 cut(s) | 307, 425, 543 |
| HpaII | CCGG | 2 cut(s) | 59, 388 |
| HphI | GGTGA | 4 cut(s) | 206, 257, 299, 667 |
| Hpy166II | GTNNAC | 1 cut(s) | 108 |
| Hpy188I | TCNGA | 5 cut(s) | 513, 627, 898, 912, 941 |
| Hpy188III | TCNNGA | 5 cut(s) | 65, 353, 397, 473, 534 |
| Hpy8I | GTNNAC | 1 cut(s) | 108 |
| HpyAV | CCTTC | 4 cut(s) | 135, 508, 829, 875 |
| HpyCH4III | ACNGT | 1 cut(s) | 162 |
| HpyCH4IV | ACGT | 3 cut(s) | 301, 847, 924 |
| HpyCH4V | TGCA | 2 cut(s) | 56, 262 |
| HpyF3I | CTNAG | 2 cut(s) | 539, 769 |
| HpySE526I | ACGT | 3 cut(s) | 301, 847, 924 |
| Hsp92II | CATG | 2 cut(s) | 476, 611 |
| HspAI | GCGC | 1 cut(s) | 457 |
| Kzo9I | GATC | 1 cut(s) | 907 |
| LmnI | GCTCC | 3 cut(s) | 454, 611, 856 |
| LpnPI | CCDG | 9 cut(s) | 72, 225, 270, 366, 401, 722, 736, 765, 886 |
| Lsp1109I | GCAGC | 3 cut(s) | 243, 246, 507 |
| LweI | GCATC | 1 cut(s) | 43 |
| MaeII | ACGT | 3 cut(s) | 301, 847, 924 |
| MaeIII | GTNAC | 3 cut(s) | 47, 419, 589 |
| MalI | GATC | 1 cut(s) | 909 |
| MboI | GATC | 1 cut(s) | 907 |
| MboII | GAAGA | 6 cut(s) | 251, 769, 817, 820, 844, 932 |
| MhlI | GDGCHC | 1 cut(s) | 853 |
| MluCI | AATT | 6 cut(s) | 86, 264, 339, 375, 379, 621 |
| MlyI | GAGTC | 2 cut(s) | 434, 537 |
| MmeI | TCCRAC | 2 cut(s) | 15, 340 |
| MnlI | CCTC | 9 cut(s) | 111, 235, 235, 360, 403, 615, 731, 734, 777 |
| MroXI | GAANNNNTTC | 1 cut(s) | 42 |
| MseI | TTAA | 4 cut(s) | 327, 378, 632, 741 |
| MslI | CAYNNNNRTG | 2 cut(s) | 76, 732 |
| MspCI | CTTAAG | 1 cut(s) | 631 |
| MspI | CCGG | 2 cut(s) | 59, 388 |
| MspR9I | CCNGG | 1 cut(s) | 389 |
| Mva1269I | GAATGC | 1 cut(s) | 442 |
| NciI | CCSGG | 1 cut(s) | 389 |
| NdeII | GATC | 1 cut(s) | 907 |
| NlaIII | CATG | 2 cut(s) | 476, 611 |
| NlaIV | GGNNCC | 2 cut(s) | 83, 579 |
| OliI | CACNNNNGTG | 1 cut(s) | 76 |
| PagI | TCATGA | 1 cut(s) | 472 |
| PceI | AGGCCT | 1 cut(s) | 124 |
| PctI | GAATGC | 1 cut(s) | 442 |
| PdmI | GAANNNNTTC | 1 cut(s) | 42 |
| PfeI | GAWTC | 1 cut(s) | 307 |
| PflFI | GACNNNGTC | 1 cut(s) | 479 |
| PinAI | ACCGGT | 1 cut(s) | 58 |
| PkrI | GCNGC | 3 cut(s) | 258, 261, 522 |
| PleI | GAGTC | 2 cut(s) | 433, 537 |
| PpsI | GAGTC | 2 cut(s) | 433, 537 |
| PpuMI | RGGWCCY | 1 cut(s) | 578 |
| PshBI | ATTAAT | 1 cut(s) | 378 |
| Psp5II | RGGWCCY | 1 cut(s) | 578 |
| PspN4I | GGNNCC | 2 cut(s) | 83, 579 |
| PspPI | GGNCC | 1 cut(s) | 578 |
| PspPPI | RGGWCCY | 1 cut(s) | 578 |
| PsyI | GACNNNGTC | 1 cut(s) | 479 |
| RsaI | GTAC | 1 cut(s) | 294 |
| RsaNI | GTAC | 1 cut(s) | 293 |
| RseI | CAYNNNNRTG | 2 cut(s) | 76, 732 |
| SaqAI | TTAA | 4 cut(s) | 327, 378, 632, 741 |
| SatI | GCNGC | 3 cut(s) | 257, 260, 521 |
| Sau3AI | GATC | 1 cut(s) | 907 |
| Sau96I | GGNCC | 1 cut(s) | 578 |
| SchI | GAGTC | 2 cut(s) | 434, 537 |
| ScrFI | CCNGG | 1 cut(s) | 389 |
| SduI | GDGCHC | 1 cut(s) | 853 |
| SfaNI | GCATC | 1 cut(s) | 43 |
| SinI | GGWCC | 1 cut(s) | 578 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 76, 732 |
| SmlI | CTYRAG | 2 cut(s) | 631, 671 |
| SmoI | CTYRAG | 2 cut(s) | 631, 671 |
| Sse9I | AATT | 6 cut(s) | 86, 264, 339, 375, 379, 621 |
| SseBI | AGGCCT | 1 cut(s) | 124 |
| SspI | AATATT | 1 cut(s) | 403 |
| StuI | AGGCCT | 1 cut(s) | 124 |
| StyD4I | CCNGG | 1 cut(s) | 387 |
| TaaI | ACNGT | 1 cut(s) | 162 |
| TaiI | ACGT | 3 cut(s) | 304, 850, 927 |
| TaqI | TCGA | 3 cut(s) | 227, 396, 535 |
| TasI | AATT | 6 cut(s) | 86, 264, 339, 375, 379, 621 |
| TatI | WGTACW | 1 cut(s) | 292 |
| TfiI | GAWTC | 1 cut(s) | 307 |
| Tru1I | TTAA | 4 cut(s) | 327, 378, 632, 741 |
| Tru9I | TTAA | 4 cut(s) | 327, 378, 632, 741 |
| TscAI | CASTG | 1 cut(s) | 716 |
| TseI | GCWGC | 3 cut(s) | 256, 259, 520 |
| TspDTI | ATGAA | 4 cut(s) | 332, 351, 461, 857 |
| TspRI | CASTG | 1 cut(s) | 716 |
| Tth111I | GACNNNGTC | 1 cut(s) | 479 |
| Vha464I | CTTAAG | 1 cut(s) | 631 |
| VpaK11BI | GGWCC | 1 cut(s) | 578 |
| VspI | ATTAAT | 1 cut(s) | 378 |
| XapI | RAATTY | 2 cut(s) | 339, 621 |
| XmiI | GTMKAC | 1 cut(s) | 107 |
| XmnI | GAANNNNTTC | 1 cut(s) | 42 |