transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 107 |
| AatII | GACGTC | 1 cut(s) | 352 |
| AccI | GTMKAC | 1 cut(s) | 346 |
| AccII | CGCG | 1 cut(s) | 260 |
| AciI | CCGC | 2 cut(s) | 258, 260 |
| AcyI | GRCGYC | 1 cut(s) | 349 |
| AfaI | GTAC | 1 cut(s) | 35 |
| AgsI | TTSAA | 4 cut(s) | 191, 197, 338, 437 |
| AjiI | CACGTC | 1 cut(s) | 242 |
| AluBI | AGCT | 3 cut(s) | 58, 341, 412 |
| AluI | AGCT | 3 cut(s) | 58, 341, 412 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 411 |
| AsuHPI | GGTGA | 4 cut(s) | 74, 157, 280, 320 |
| BccI | CCATC | 1 cut(s) | 278 |
| BciVI | GTATCC | 1 cut(s) | 256 |
| BfaI | CTAG | 2 cut(s) | 15, 342 |
| BfmI | CTRYAG | 1 cut(s) | 171 |
| BfuI | GTATCC | 1 cut(s) | 256 |
| BmgBI | CACGTC | 1 cut(s) | 242 |
| BmsI | GCATC | 5 cut(s) | 193, 352, 370, 412, 434 |
| BsaHI | GRCGYC | 1 cut(s) | 349 |
| BsaJI | CCNNGG | 1 cut(s) | 258 |
| BseDI | CCNNGG | 1 cut(s) | 258 |
| BseGI | GGATG | 2 cut(s) | 289, 364 |
| BseRI | GAGGAG | 1 cut(s) | 335 |
| BsgI | GTGCAG | 1 cut(s) | 299 |
| Bsh1236I | CGCG | 1 cut(s) | 260 |
| BslFI | GGGAC | 1 cut(s) | 252 |
| BsmFI | GGGAC | 1 cut(s) | 252 |
| BsmI | GAATGC | 1 cut(s) | 245 |
| Bsp143I | GATC | 1 cut(s) | 104 |
| BspACI | CCGC | 2 cut(s) | 258, 260 |
| BspFNI | CGCG | 1 cut(s) | 260 |
| BspHI | TCATGA | 1 cut(s) | 81 |
| BspMAI | CTGCAG | 1 cut(s) | 175 |
| BssECI | CCNNGG | 1 cut(s) | 258 |
| BssMI | GATC | 1 cut(s) | 104 |
| BssNI | GRCGYC | 1 cut(s) | 349 |
| Bst4CI | ACNGT | 1 cut(s) | 268 |
| BstACI | GRCGYC | 1 cut(s) | 349 |
| BstC8I | GCNNGC | 1 cut(s) | 171 |
| BstDSI | CCRYGG | 1 cut(s) | 258 |
| BstF5I | GGATG | 2 cut(s) | 289, 364 |
| BstFNI | CGCG | 1 cut(s) | 260 |
| BstKTI | GATC | 1 cut(s) | 107 |
| BstMBI | GATC | 1 cut(s) | 104 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 251 |
| BstSFI | CTRYAG | 1 cut(s) | 171 |
| BstUI | CGCG | 1 cut(s) | 260 |
| BsuI | GTATCC | 1 cut(s) | 256 |
| BtgI | CCRYGG | 1 cut(s) | 258 |
| BtrI | CACGTC | 1 cut(s) | 242 |
| BtsCI | GGATG | 2 cut(s) | 289, 364 |
| Cac8I | GCNNGC | 1 cut(s) | 171 |
| CciI | TCATGA | 1 cut(s) | 81 |
| Cfr42I | CCGCGG | 1 cut(s) | 261 |
| Csp6I | GTAC | 1 cut(s) | 34 |
| CviAII | CATG | 4 cut(s) | 82, 163, 250, 441 |
| CviJI | RGCY | 4 cut(s) | 58, 254, 341, 412 |
| CviKI_1 | RGCY | 4 cut(s) | 58, 254, 341, 412 |
| CviQI | GTAC | 1 cut(s) | 34 |
| DpnI | GATC | 1 cut(s) | 106 |
| DpnII | GATC | 1 cut(s) | 104 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 107 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 107 |
| EcoT22I | ATGCAT | 1 cut(s) | 427 |
| FaeI | CATG | 4 cut(s) | 85, 166, 253, 444 |
| FaiI | YATR | 6 cut(s) | 83, 164, 251, 314, 327, 442 |
| FaqI | GGGAC | 1 cut(s) | 252 |
| FatI | CATG | 4 cut(s) | 81, 162, 249, 440 |
| FblI | GTMKAC | 1 cut(s) | 346 |
| FokI | GGATG | 2 cut(s) | 296, 371 |
| FspBI | CTAG | 2 cut(s) | 15, 342 |
| Hin1I | GRCGYC | 1 cut(s) | 349 |
| Hin1II | CATG | 4 cut(s) | 85, 166, 253, 444 |
| HincII | GTYRAC | 2 cut(s) | 22, 347 |
| HindII | GTYRAC | 2 cut(s) | 22, 347 |
| HindIII | AAGCTT | 2 cut(s) | 56, 410 |
| HphI | GGTGA | 4 cut(s) | 74, 157, 280, 320 |
| Hpy166II | GTNNAC | 2 cut(s) | 22, 347 |
| Hpy188I | TCNGA | 2 cut(s) | 319, 358 |
| Hpy188III | TCNNGA | 3 cut(s) | 82, 188, 434 |
| Hpy8I | GTNNAC | 2 cut(s) | 22, 347 |
| Hpy99I | CGWCG | 1 cut(s) | 351 |
| HpyAV | CCTTC | 2 cut(s) | 142, 363 |
| HpyCH4III | ACNGT | 1 cut(s) | 268 |
| HpyCH4IV | ACGT | 2 cut(s) | 241, 349 |
| HpyCH4V | TGCA | 7 cut(s) | 70, 91, 98, 173, 245, 280, 425 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 251 |
| HpySE526I | ACGT | 2 cut(s) | 241, 349 |
| Hsp92I | GRCGYC | 1 cut(s) | 349 |
| Hsp92II | CATG | 4 cut(s) | 85, 166, 253, 444 |
| KspI | CCGCGG | 1 cut(s) | 261 |
| Kzo9I | GATC | 1 cut(s) | 104 |
| LpnPI | CCDG | 3 cut(s) | 183, 213, 266 |
| LweI | GCATC | 5 cut(s) | 193, 352, 370, 412, 434 |
| MaeI | CTAG | 2 cut(s) | 15, 342 |
| MaeII | ACGT | 2 cut(s) | 241, 349 |
| MaeIII | GTNAC | 1 cut(s) | 62 |
| MalI | GATC | 1 cut(s) | 106 |
| MboI | GATC | 1 cut(s) | 104 |
| MboII | GAAGA | 1 cut(s) | 146 |
| MluCI | AATT | 3 cut(s) | 92, 126, 192 |
| MmeI | TCCRAC | 1 cut(s) | 384 |
| MnlI | CCTC | 1 cut(s) | 313 |
| Mph1103I | ATGCAT | 1 cut(s) | 427 |
| MroXI | GAANNNNTTC | 1 cut(s) | 411 |
| MseI | TTAA | 1 cut(s) | 417 |
| MspA1I | CMGCKG | 1 cut(s) | 260 |
| Mva1269I | GAATGC | 1 cut(s) | 245 |
| MvnI | CGCG | 1 cut(s) | 260 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 251 |
| NdeII | GATC | 1 cut(s) | 104 |
| NlaIII | CATG | 4 cut(s) | 85, 166, 253, 444 |
| NmuCI | GTSAC | 1 cut(s) | 62 |
| NsiI | ATGCAT | 1 cut(s) | 427 |
| PagI | TCATGA | 1 cut(s) | 81 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 362 |
| PctI | GAATGC | 1 cut(s) | 245 |
| PdmI | GAANNNNTTC | 1 cut(s) | 411 |
| PflFI | GACNNNGTC | 1 cut(s) | 179 |
| PstI | CTGCAG | 1 cut(s) | 175 |
| PsyI | GACNNNGTC | 1 cut(s) | 179 |
| RsaI | GTAC | 1 cut(s) | 35 |
| RsaNI | GTAC | 1 cut(s) | 34 |
| SacII | CCGCGG | 1 cut(s) | 261 |
| SalI | GTCGAC | 1 cut(s) | 345 |
| SaqAI | TTAA | 1 cut(s) | 417 |
| Sau3AI | GATC | 1 cut(s) | 104 |
| SetI | ASST | 6 cut(s) | 60, 153, 244, 343, 352, 414 |
| SfaNI | GCATC | 5 cut(s) | 193, 352, 370, 412, 434 |
| SfcI | CTRYAG | 1 cut(s) | 171 |
| Sfr303I | CCGCGG | 1 cut(s) | 261 |
| SgrBI | CCGCGG | 1 cut(s) | 261 |
| Sse9I | AATT | 3 cut(s) | 92, 126, 192 |
| SsiI | CCGC | 2 cut(s) | 258, 260 |
| SspMI | CTAG | 2 cut(s) | 15, 342 |
| TaaI | ACNGT | 1 cut(s) | 268 |
| TaiI | ACGT | 2 cut(s) | 244, 352 |
| TaqI | TCGA | 1 cut(s) | 346 |
| TaqII | GACCGA | 1 cut(s) | 117 |
| TasI | AATT | 3 cut(s) | 92, 126, 192 |
| TatI | WGTACW | 1 cut(s) | 33 |
| Tru1I | TTAA | 1 cut(s) | 417 |
| Tru9I | TTAA | 1 cut(s) | 417 |
| TseFI | GTSAC | 1 cut(s) | 62 |
| Tsp45I | GTSAC | 1 cut(s) | 62 |
| TspDTI | ATGAA | 4 cut(s) | 70, 151, 238, 314 |
| Tth111I | GACNNNGTC | 1 cut(s) | 179 |
| XmiI | GTMKAC | 1 cut(s) | 346 |
| XmnI | GAANNNNTTC | 1 cut(s) | 411 |
| XspI | CTAG | 2 cut(s) | 15, 342 |
| ZraI | GACGTC | 1 cut(s) | 350 |
| Zsp2I | ATGCAT | 1 cut(s) | 427 |