transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 218, 939 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 779 |
| AciI | CCGC | 1 cut(s) | 944 |
| AclWI | GGATC | 2 cut(s) | 580, 907 |
| AcsI | RAATTY | 4 cut(s) | 154, 184, 271, 379 |
| AcvI | CACGTG | 1 cut(s) | 1028 |
| AcyI | GRCGYC | 1 cut(s) | 770 |
| AfaI | GTAC | 2 cut(s) | 199, 281 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 703, 779, 893 |
| AflII | CTTAAG | 1 cut(s) | 806 |
| AflIII | ACRYGT | 2 cut(s) | 92, 880 |
| AgsI | TTSAA | 4 cut(s) | 154, 859, 1040, 1066 |
| AleI | CACNNNNGTG | 1 cut(s) | 343 |
| AluBI | AGCT | 4 cut(s) | 415, 536, 638, 799 |
| AluI | AGCT | 4 cut(s) | 415, 536, 638, 799 |
| Alw21I | GWGCWC | 1 cut(s) | 417 |
| Alw26I | GTCTC | 1 cut(s) | 1094 |
| AlwI | GGATC | 2 cut(s) | 580, 907 |
| ApeKI | GCWGC | 1 cut(s) | 638 |
| ApoI | RAATTY | 4 cut(s) | 154, 184, 271, 379 |
| AseI | ATTAAT | 1 cut(s) | 317 |
| BaeGI | GKGCMC | 1 cut(s) | 888 |
| BanII | GRGCYC | 1 cut(s) | 417 |
| BbrPI | CACGTG | 1 cut(s) | 1028 |
| Bbv12I | GWGCWC | 1 cut(s) | 417 |
| BbvI | GCAGC | 1 cut(s) | 625 |
| BccI | CCATC | 2 cut(s) | 228, 942 |
| BclI | TGATCA | 1 cut(s) | 955 |
| BcoDI | GTCTC | 1 cut(s) | 1094 |
| BfaI | CTAG | 5 cut(s) | 38, 50, 212, 260, 423 |
| BfmI | CTRYAG | 1 cut(s) | 57 |
| BfrI | CTTAAG | 1 cut(s) | 806 |
| BisI | GCNGC | 1 cut(s) | 639 |
| BlpI | GCTNAGC | 1 cut(s) | 543 |
| BlsI | GCNGC | 1 cut(s) | 640 |
| BmcAI | AGTACT | 1 cut(s) | 281 |
| BmiI | GGNNCC | 2 cut(s) | 590, 834 |
| BmsI | GCATC | 3 cut(s) | 460, 490, 686 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 185, 217 |
| Bpu10I | CCTNAGC | 1 cut(s) | 537 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 543 |
| BpuEI | CTTGAG | 1 cut(s) | 401 |
| BsaAI | YACGTR | 1 cut(s) | 1028 |
| BsaHI | GRCGYC | 1 cut(s) | 770 |
| BsaJI | CCNNGG | 2 cut(s) | 451, 874 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 911, 941 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 703, 779, 893 |
| BseDI | CCNNGG | 2 cut(s) | 451, 874 |
| BseGI | GGATG | 3 cut(s) | 475, 953, 958 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 703, 779, 893 |
| BseRI | GAGGAG | 1 cut(s) | 511 |
| BseSI | GKGCMC | 1 cut(s) | 888 |
| BseXI | GCAGC | 1 cut(s) | 625 |
| BsiHKAI | GWGCWC | 1 cut(s) | 417 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 703, 779, 893 |
| BsmAI | GTCTC | 1 cut(s) | 1094 |
| BsmI | GAATGC | 2 cut(s) | 515, 755 |
| Bsp1286I | GDGCHC | 2 cut(s) | 417, 888 |
| Bsp143I | GATC | 3 cut(s) | 572, 899, 955 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 543 |
| Bsp19I | CCATGG | 1 cut(s) | 451 |
| BspACI | CCGC | 1 cut(s) | 944 |
| BspLI | GGNNCC | 2 cut(s) | 590, 834 |
| BspPI | GGATC | 2 cut(s) | 580, 907 |
| BspTI | CTTAAG | 1 cut(s) | 806 |
| BssECI | CCNNGG | 2 cut(s) | 451, 874 |
| BssMI | GATC | 3 cut(s) | 572, 899, 955 |
| BssNI | GRCGYC | 1 cut(s) | 770 |
| BssT1I | CCWWGG | 1 cut(s) | 451 |
| Bst4CI | ACNGT | 1 cut(s) | 257 |
| Bst6I | CTCTTC | 1 cut(s) | 1067 |
| BstACI | GRCGYC | 1 cut(s) | 770 |
| BstAFI | CTTAAG | 1 cut(s) | 806 |
| BstBAI | YACGTR | 1 cut(s) | 1028 |
| BstC8I | GCNNGC | 3 cut(s) | 47, 397, 643 |
| BstDEI | CTNAG | 5 cut(s) | 283, 310, 444, 537, 543 |
| BstDSI | CCRYGG | 2 cut(s) | 451, 874 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 701 |
| BstF5I | GGATG | 3 cut(s) | 475, 953, 958 |
| BstKTI | GATC | 3 cut(s) | 575, 902, 958 |
| BstMAI | GTCTC | 1 cut(s) | 1094 |
| BstMBI | GATC | 3 cut(s) | 572, 899, 955 |
| BstNSI | RCATGY | 6 cut(s) | 49, 96, 645, 873, 884, 1078 |
| BstSFI | CTRYAG | 1 cut(s) | 57 |
| BstSLI | GKGCMC | 1 cut(s) | 888 |
| BstV1I | GCAGC | 1 cut(s) | 625 |
| BtgI | CCRYGG | 2 cut(s) | 451, 874 |
| BtsCI | GGATG | 3 cut(s) | 475, 953, 958 |
| BtsI | GCAGTG | 1 cut(s) | 554 |
| BtsIMutI | CAGTG | 1 cut(s) | 554 |
| Cac8I | GCNNGC | 3 cut(s) | 47, 397, 643 |
| CseI | GACGC | 1 cut(s) | 778 |
| Csp6I | GTAC | 2 cut(s) | 198, 280 |
| CviQI | GTAC | 2 cut(s) | 198, 280 |
| DdeI | CTNAG | 5 cut(s) | 283, 310, 444, 537, 543 |
| DpnI | GATC | 3 cut(s) | 574, 901, 957 |
| DpnII | GATC | 3 cut(s) | 572, 899, 955 |
| DraI | TTTAAA | 2 cut(s) | 163, 369 |
| Eam1104I | CTCTTC | 1 cut(s) | 1067 |
| EarI | CTCTTC | 1 cut(s) | 1067 |
| Ecl136II | GAGCTC | 1 cut(s) | 415 |
| Eco130I | CCWWGG | 1 cut(s) | 451 |
| Eco24I | GRGCYC | 1 cut(s) | 417 |
| Eco53kI | GAGCTC | 1 cut(s) | 415 |
| Eco72I | CACGTG | 1 cut(s) | 1028 |
| EcoICRI | GAGCTC | 1 cut(s) | 415 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 701 |
| EcoT14I | CCWWGG | 1 cut(s) | 451 |
| EcoT22I | ATGCAT | 2 cut(s) | 647, 735 |
| EcoT38I | GRGCYC | 1 cut(s) | 417 |
| ErhI | CCWWGG | 1 cut(s) | 451 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 281, 313 |
| FauI | CCCGC | 1 cut(s) | 937 |
| FbaI | TGATCA | 1 cut(s) | 955 |
| Fnu4HI | GCNGC | 1 cut(s) | 639 |
| FokI | GGATG | 3 cut(s) | 482, 945, 960 |
| FriOI | GRGCYC | 1 cut(s) | 417 |
| Fsp4HI | GCNGC | 1 cut(s) | 639 |
| FspBI | CTAG | 5 cut(s) | 38, 50, 212, 260, 423 |
| GluI | GCNGC | 1 cut(s) | 639 |
| HgaI | GACGC | 1 cut(s) | 778 |
| Hin1I | GRCGYC | 1 cut(s) | 770 |
| HincII | GTYRAC | 1 cut(s) | 817 |
| HindII | GTYRAC | 1 cut(s) | 817 |
| HinfI | GANTC | 3 cut(s) | 430, 920, 979 |
| Hpy166II | GTNNAC | 3 cut(s) | 198, 817, 1025 |
| Hpy188I | TCNGA | 1 cut(s) | 667 |
| Hpy188III | TCNNGA | 4 cut(s) | 38, 142, 983, 1093 |
| Hpy8I | GTNNAC | 3 cut(s) | 198, 817, 1025 |
| HpyAV | CCTTC | 1 cut(s) | 898 |
| HpyCH4III | ACNGT | 1 cut(s) | 257 |
| HpyCH4IV | ACGT | 2 cut(s) | 905, 1027 |
| HpyCH4V | TGCA | 6 cut(s) | 45, 100, 641, 645, 733, 755 |
| HpyF3I | CTNAG | 5 cut(s) | 283, 310, 444, 537, 543 |
| HpySE526I | ACGT | 2 cut(s) | 905, 1027 |
| Hsp92I | GRCGYC | 1 cut(s) | 770 |
| Ksp22I | TGATCA | 1 cut(s) | 955 |
| Kzo9I | GATC | 3 cut(s) | 572, 899, 955 |
| LmnI | GCTCC | 3 cut(s) | 498, 838, 1083 |
| LpnPI | CCDG | 5 cut(s) | 224, 385, 409, 855, 976 |
| Lsp1109I | GCAGC | 1 cut(s) | 625 |
| LweI | GCATC | 3 cut(s) | 460, 490, 686 |
| MaeI | CTAG | 5 cut(s) | 38, 50, 212, 260, 423 |
| MaeII | ACGT | 2 cut(s) | 905, 1027 |
| MalI | GATC | 3 cut(s) | 574, 901, 957 |
| MboI | GATC | 3 cut(s) | 572, 899, 955 |
| MboII | GAAGA | 3 cut(s) | 672, 988, 1054 |
| MhlI | GDGCHC | 2 cut(s) | 417, 888 |
| MluCI | AATT | 8 cut(s) | 103, 154, 184, 222, 271, 379, 721, 998 |
| MlyI | GAGTC | 1 cut(s) | 914 |
| MmeI | TCCRAC | 2 cut(s) | 650, 954 |
| Mph1103I | ATGCAT | 2 cut(s) | 647, 735 |
| MseI | TTAA | 9 cut(s) | 162, 276, 317, 368, 611, 807, 969, 1017, 1102 |
| MslI | CAYNNNNRTG | 3 cut(s) | 343, 491, 879 |
| MspCI | CTTAAG | 1 cut(s) | 806 |
| Mva1269I | GAATGC | 2 cut(s) | 515, 755 |
| NcoI | CCATGG | 1 cut(s) | 451 |
| NdeII | GATC | 3 cut(s) | 572, 899, 955 |
| NlaIV | GGNNCC | 2 cut(s) | 590, 834 |
| NsiI | ATGCAT | 2 cut(s) | 647, 735 |
| NspI | RCATGY | 6 cut(s) | 49, 96, 645, 873, 884, 1078 |
| OliI | CACNNNNGTG | 1 cut(s) | 343 |
| PaeI | GCATGC | 2 cut(s) | 49, 645 |
| PciI | ACATGT | 2 cut(s) | 92, 880 |
| PctI | GAATGC | 2 cut(s) | 515, 755 |
| PfeI | GAWTC | 2 cut(s) | 430, 979 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 779 |
| PkrI | GCNGC | 1 cut(s) | 640 |
| PleI | GAGTC | 1 cut(s) | 914 |
| PmaCI | CACGTG | 1 cut(s) | 1028 |
| PmlI | CACGTG | 1 cut(s) | 1028 |
| PpsI | GAGTC | 1 cut(s) | 914 |
| Ppu21I | YACGTR | 1 cut(s) | 1028 |
| PscI | ACATGT | 2 cut(s) | 92, 880 |
| PshBI | ATTAAT | 1 cut(s) | 317 |
| PsiI | TTATAA | 2 cut(s) | 218, 939 |
| Psp124BI | GAGCTC | 1 cut(s) | 417 |
| PspCI | CACGTG | 1 cut(s) | 1028 |
| PspN4I | GGNNCC | 2 cut(s) | 590, 834 |
| RsaI | GTAC | 2 cut(s) | 199, 281 |
| RsaNI | GTAC | 2 cut(s) | 198, 280 |
| RseI | CAYNNNNRTG | 3 cut(s) | 343, 491, 879 |
| SacI | GAGCTC | 1 cut(s) | 417 |
| SaqAI | TTAA | 9 cut(s) | 162, 276, 317, 368, 611, 807, 969, 1017, 1102 |
| SatI | GCNGC | 1 cut(s) | 639 |
| Sau3AI | GATC | 3 cut(s) | 572, 899, 955 |
| ScaI | AGTACT | 1 cut(s) | 281 |
| SchI | GAGTC | 1 cut(s) | 914 |
| SduI | GDGCHC | 2 cut(s) | 417, 888 |
| SfaNI | GCATC | 3 cut(s) | 460, 490, 686 |
| SfcI | CTRYAG | 1 cut(s) | 57 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 343, 491, 879 |
| SmlI | CTYRAG | 3 cut(s) | 416, 806, 1093 |
| SmoI | CTYRAG | 3 cut(s) | 416, 806, 1093 |
| SphI | GCATGC | 2 cut(s) | 49, 645 |
| Sse9I | AATT | 8 cut(s) | 103, 154, 184, 222, 271, 379, 721, 998 |
| SsiI | CCGC | 1 cut(s) | 944 |
| SspI | AATATT | 1 cut(s) | 620 |
| SspMI | CTAG | 5 cut(s) | 38, 50, 212, 260, 423 |
| SstI | GAGCTC | 1 cut(s) | 417 |
| StyI | CCWWGG | 1 cut(s) | 451 |
| TaaI | ACNGT | 1 cut(s) | 257 |
| TaiI | ACGT | 2 cut(s) | 908, 1030 |
| TaqI | TCGA | 1 cut(s) | 232 |
| TasI | AATT | 8 cut(s) | 103, 154, 184, 222, 271, 379, 721, 998 |
| TatI | WGTACW | 1 cut(s) | 279 |
| TfiI | GAWTC | 2 cut(s) | 430, 979 |
| Tru1I | TTAA | 9 cut(s) | 162, 276, 317, 368, 611, 807, 969, 1017, 1102 |
| Tru9I | TTAA | 9 cut(s) | 162, 276, 317, 368, 611, 807, 969, 1017, 1102 |
| TscAI | CASTG | 1 cut(s) | 554 |
| TseI | GCWGC | 1 cut(s) | 638 |
| TspDTI | ATGAA | 4 cut(s) | 39, 107, 593, 748 |
| TspGWI | ACGGA | 1 cut(s) | 891 |
| TspRI | CASTG | 1 cut(s) | 554 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 779 |
| Vha464I | CTTAAG | 1 cut(s) | 806 |
| VspI | ATTAAT | 1 cut(s) | 317 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 701 |
| XapI | RAATTY | 4 cut(s) | 154, 184, 271, 379 |
| XbaI | TCTAGA | 1 cut(s) | 37 |
| XceI | RCATGY | 6 cut(s) | 49, 96, 645, 873, 884, 1078 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 969 |
| XspI | CTAG | 5 cut(s) | 38, 50, 212, 260, 423 |
| ZrmI | AGTACT | 1 cut(s) | 281 |
| Zsp2I | ATGCAT | 2 cut(s) | 647, 735 |