Aspartyl protease
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 131 |
| AfaI | GTAC | 1 cut(s) | 165 |
| AflIII | ACRYGT | 1 cut(s) | 199 |
| AgsI | TTSAA | 4 cut(s) | 87, 274, 294, 352 |
| AhlI | ACTAGT | 1 cut(s) | 107 |
| AjiI | CACGTC | 1 cut(s) | 200 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 83, 115 |
| AluBI | AGCT | 3 cut(s) | 277, 379, 410 |
| AluI | AGCT | 3 cut(s) | 277, 379, 410 |
| Alw21I | GWGCWC | 1 cut(s) | 329 |
| ApoI | RAATTY | 1 cut(s) | 131 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 172, 204 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 71 |
| AspS9I | GGNCC | 1 cut(s) | 420 |
| AvaII | GGWCC | 1 cut(s) | 420 |
| Bbv12I | GWGCWC | 1 cut(s) | 329 |
| BccI | CCATC | 1 cut(s) | 456 |
| BcuI | ACTAGT | 1 cut(s) | 107 |
| BfaI | CTAG | 3 cut(s) | 108, 195, 314 |
| Bme18I | GGWCC | 1 cut(s) | 420 |
| BmgBI | CACGTC | 1 cut(s) | 200 |
| BmgT120I | GGNCC | 1 cut(s) | 420 |
| BmiI | GGNNCC | 1 cut(s) | 127 |
| BmsI | GCATC | 1 cut(s) | 471 |
| BpuEI | CTTGAG | 1 cut(s) | 102 |
| BsaAI | YACGTR | 1 cut(s) | 395 |
| Bse1I | ACTGG | 1 cut(s) | 339 |
| Bse3DI | GCAATG | 1 cut(s) | 423 |
| BseGI | GGATG | 2 cut(s) | 58, 448 |
| BseMI | GCAATG | 1 cut(s) | 423 |
| BseMII | CTCAG | 1 cut(s) | 374 |
| BseNI | ACTGG | 1 cut(s) | 339 |
| BseRI | GAGGAG | 2 cut(s) | 19, 337 |
| BsiHKAI | GWGCWC | 1 cut(s) | 329 |
| BslFI | GGGAC | 1 cut(s) | 118 |
| BsmFI | GGGAC | 1 cut(s) | 118 |
| BsmI | GAATGC | 1 cut(s) | 82 |
| Bsp1286I | GDGCHC | 1 cut(s) | 329 |
| Bsp1407I | TGTACA | 1 cut(s) | 163 |
| BspCNI | CTCAG | 1 cut(s) | 375 |
| BspLI | GGNNCC | 1 cut(s) | 127 |
| BsrDI | GCAATG | 1 cut(s) | 423 |
| BsrGI | TGTACA | 1 cut(s) | 163 |
| BsrI | ACTGG | 1 cut(s) | 339 |
| BstAUI | TGTACA | 1 cut(s) | 163 |
| BstBAI | YACGTR | 1 cut(s) | 395 |
| BstDEI | CTNAG | 3 cut(s) | 169, 383, 474 |
| BstF5I | GGATG | 2 cut(s) | 58, 448 |
| BtrI | CACGTC | 1 cut(s) | 200 |
| BtsCI | GGATG | 2 cut(s) | 58, 448 |
| Cfr13I | GGNCC | 1 cut(s) | 420 |
| Csp6I | GTAC | 1 cut(s) | 164 |
| CviAII | CATG | 1 cut(s) | 252 |
| CviJI | RGCY | 4 cut(s) | 158, 277, 379, 410 |
| CviKI_1 | RGCY | 4 cut(s) | 158, 277, 379, 410 |
| CviQI | GTAC | 1 cut(s) | 164 |
| DdeI | CTNAG | 3 cut(s) | 169, 383, 474 |
| Eco47I | GGWCC | 1 cut(s) | 420 |
| EcoT22I | ATGCAT | 1 cut(s) | 310 |
| FaeI | CATG | 1 cut(s) | 255 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 83, 115 |
| FaqI | GGGAC | 1 cut(s) | 118 |
| FatI | CATG | 1 cut(s) | 251 |
| FokI | GGATG | 2 cut(s) | 65, 435 |
| FspBI | CTAG | 3 cut(s) | 108, 195, 314 |
| Hin1II | CATG | 1 cut(s) | 255 |
| HindIII | AAGCTT | 1 cut(s) | 377 |
| HinfI | GANTC | 1 cut(s) | 7 |
| Hpy166II | GTNNAC | 1 cut(s) | 166 |
| Hpy188I | TCNGA | 1 cut(s) | 384 |
| Hpy188III | TCNNGA | 3 cut(s) | 23, 37, 64 |
| Hpy8I | GTNNAC | 1 cut(s) | 166 |
| HpyAV | CCTTC | 4 cut(s) | 85, 237, 258, 300 |
| HpyCH4IV | ACGT | 2 cut(s) | 199, 394 |
| HpyCH4V | TGCA | 1 cut(s) | 308 |
| HpyF3I | CTNAG | 3 cut(s) | 169, 383, 474 |
| HpySE526I | ACGT | 2 cut(s) | 199, 394 |
| Hsp92II | CATG | 1 cut(s) | 255 |
| LmnI | GCTCC | 2 cut(s) | 145, 324 |
| LpnPI | CCDG | 3 cut(s) | 50, 279, 320 |
| LweI | GCATC | 1 cut(s) | 471 |
| MaeI | CTAG | 3 cut(s) | 108, 195, 314 |
| MaeII | ACGT | 2 cut(s) | 199, 394 |
| MaeIII | GTNAC | 1 cut(s) | 390 |
| MboII | GAAGA | 1 cut(s) | 79 |
| MhlI | GDGCHC | 1 cut(s) | 329 |
| MluCI | AATT | 1 cut(s) | 131 |
| MlyI | GAGTC | 1 cut(s) | 16 |
| MmeI | TCCRAC | 1 cut(s) | 398 |
| MnlI | CCTC | 5 cut(s) | 148, 166, 315, 361, 378 |
| Mph1103I | ATGCAT | 1 cut(s) | 310 |
| MroXI | GAANNNNTTC | 1 cut(s) | 71 |
| MslI | CAYNNNNRTG | 1 cut(s) | 453 |
| Mva1269I | GAATGC | 1 cut(s) | 82 |
| NlaIII | CATG | 1 cut(s) | 255 |
| NlaIV | GGNNCC | 1 cut(s) | 127 |
| NsiI | ATGCAT | 1 cut(s) | 310 |
| PctI | GAATGC | 1 cut(s) | 82 |
| PdmI | GAANNNNTTC | 1 cut(s) | 71 |
| PleI | GAGTC | 1 cut(s) | 15 |
| PpsI | GAGTC | 1 cut(s) | 15 |
| Ppu21I | YACGTR | 1 cut(s) | 395 |
| PspN4I | GGNNCC | 1 cut(s) | 127 |
| PspPI | GGNCC | 1 cut(s) | 420 |
| RsaI | GTAC | 1 cut(s) | 165 |
| RsaNI | GTAC | 1 cut(s) | 164 |
| RseI | CAYNNNNRTG | 1 cut(s) | 453 |
| Sau96I | GGNCC | 1 cut(s) | 420 |
| SchI | GAGTC | 1 cut(s) | 16 |
| SduI | GDGCHC | 1 cut(s) | 329 |
| SfaNI | GCATC | 1 cut(s) | 471 |
| SinI | GGWCC | 1 cut(s) | 420 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 453 |
| SmlI | CTYRAG | 1 cut(s) | 117 |
| SmoI | CTYRAG | 1 cut(s) | 117 |
| SpeI | ACTAGT | 1 cut(s) | 107 |
| Sse9I | AATT | 1 cut(s) | 131 |
| SspMI | CTAG | 3 cut(s) | 108, 195, 314 |
| TaiI | ACGT | 2 cut(s) | 202, 397 |
| TasI | AATT | 1 cut(s) | 131 |
| TatI | WGTACW | 1 cut(s) | 163 |
| TspDTI | ATGAA | 3 cut(s) | 64, 104, 240 |
| VpaK11BI | GGWCC | 1 cut(s) | 420 |
| XapI | RAATTY | 1 cut(s) | 131 |
| XmnI | GAANNNNTTC | 1 cut(s) | 71 |
| XspI | CTAG | 3 cut(s) | 108, 195, 314 |
| Zsp2I | ATGCAT | 1 cut(s) | 310 |