strictosidine synthase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotrans_gag | PF03732 | 3 - 95 | 6.8e-19 | Retrotransposon gag protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 308 |
| Acc36I | ACCTGC | 2 cut(s) | 308, 448 |
| AccB1I | GGYRCC | 1 cut(s) | 502 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 42, 236 |
| AcsI | RAATTY | 2 cut(s) | 264, 614 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 42, 141, 236 |
| AgsI | TTSAA | 7 cut(s) | 25, 157, 163, 187, 331, 485, 596 |
| AjnI | CCWGG | 1 cut(s) | 61 |
| AluBI | AGCT | 3 cut(s) | 448, 464, 481 |
| AluI | AGCT | 3 cut(s) | 448, 464, 481 |
| Alw21I | GWGCWC | 1 cut(s) | 495 |
| Ama87I | CYCGRG | 1 cut(s) | 584 |
| AoxI | GGCC | 3 cut(s) | 33, 211, 630 |
| ApeKI | GCWGC | 1 cut(s) | 314 |
| ApoI | RAATTY | 2 cut(s) | 264, 614 |
| AsuHPI | GGTGA | 1 cut(s) | 548 |
| AvaI | CYCGRG | 1 cut(s) | 584 |
| BanI | GGYRCC | 1 cut(s) | 502 |
| Bbv12I | GWGCWC | 1 cut(s) | 495 |
| BbvI | GCAGC | 1 cut(s) | 326 |
| BccI | CCATC | 4 cut(s) | 167, 269, 555, 574 |
| BceAI | ACGGC | 1 cut(s) | 71 |
| BciT130I | CCWGG | 1 cut(s) | 63 |
| BfaI | CTAG | 2 cut(s) | 470, 570 |
| BfuAI | ACCTGC | 2 cut(s) | 308, 448 |
| BisI | GCNGC | 1 cut(s) | 315 |
| BlsI | GCNGC | 1 cut(s) | 316 |
| Bme1390I | CCNGG | 1 cut(s) | 63 |
| BmeT110I | CYCGRG | 1 cut(s) | 584 |
| BmiI | GGNNCC | 2 cut(s) | 67, 504 |
| BmrFI | CCNGG | 1 cut(s) | 63 |
| BmsI | GCATC | 1 cut(s) | 73 |
| BpuEI | CTTGAG | 1 cut(s) | 330 |
| BsaJI | CCNNGG | 3 cut(s) | 87, 235, 633 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 42, 141, 236 |
| Bse3DI | GCAATG | 1 cut(s) | 230 |
| BseBI | CCWGG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 3 cut(s) | 87, 235, 633 |
| BseGI | GGATG | 2 cut(s) | 88, 547 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 42, 141, 236 |
| BseMI | GCAATG | 1 cut(s) | 230 |
| BseXI | GCAGC | 1 cut(s) | 326 |
| BshFI | GGCC | 3 cut(s) | 35, 213, 632 |
| BshNI | GGYRCC | 1 cut(s) | 502 |
| BsiHKAI | GWGCWC | 1 cut(s) | 495 |
| BsiHKCI | CYCGRG | 1 cut(s) | 584 |
| BslFI | GGGAC | 1 cut(s) | 159 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 42, 141, 236 |
| BsmFI | GGGAC | 1 cut(s) | 159 |
| BsmI | GAATGC | 1 cut(s) | 346 |
| BsnI | GGCC | 3 cut(s) | 35, 213, 632 |
| BsoBI | CYCGRG | 1 cut(s) | 584 |
| Bsp1286I | GDGCHC | 1 cut(s) | 495 |
| Bsp19I | CCATGG | 1 cut(s) | 235 |
| BspANI | GGCC | 3 cut(s) | 35, 213, 632 |
| BspHI | TCATGA | 2 cut(s) | 442, 610 |
| BspLI | GGNNCC | 2 cut(s) | 67, 504 |
| BspMI | ACCTGC | 2 cut(s) | 308, 448 |
| BspT107I | GGYRCC | 1 cut(s) | 502 |
| BsrDI | GCAATG | 1 cut(s) | 230 |
| BssECI | CCNNGG | 3 cut(s) | 87, 235, 633 |
| BssT1I | CCWWGG | 2 cut(s) | 235, 633 |
| Bst2UI | CCWGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 1 cut(s) | 304 |
| BstDEI | CTNAG | 1 cut(s) | 93 |
| BstDSI | CCRYGG | 2 cut(s) | 87, 235 |
| BstEII | GGTNACC | 1 cut(s) | 240 |
| BstF5I | GGATG | 2 cut(s) | 88, 547 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 323, 454 |
| BstNI | CCWGG | 1 cut(s) | 63 |
| BstPI | GGTNACC | 1 cut(s) | 240 |
| BstSCI | CCNGG | 1 cut(s) | 61 |
| BstV1I | GCAGC | 1 cut(s) | 326 |
| BsuRI | GGCC | 3 cut(s) | 35, 213, 632 |
| BtgI | CCRYGG | 2 cut(s) | 87, 235 |
| BtsCI | GGATG | 2 cut(s) | 88, 547 |
| BveI | ACCTGC | 2 cut(s) | 308, 448 |
| CciI | TCATGA | 2 cut(s) | 442, 610 |
| CsiI | ACCWGGT | 1 cut(s) | 61 |
| CviAII | CATG | 5 cut(s) | 78, 236, 443, 499, 611 |
| DdeI | CTNAG | 1 cut(s) | 93 |
| DraI | TTTAAA | 1 cut(s) | 208 |
| Eco130I | CCWWGG | 2 cut(s) | 235, 633 |
| Eco147I | AGGCCT | 1 cut(s) | 213 |
| Eco88I | CYCGRG | 1 cut(s) | 584 |
| Eco91I | GGTNACC | 1 cut(s) | 240 |
| EcoO65I | GGTNACC | 1 cut(s) | 240 |
| EcoRI | GAATTC | 1 cut(s) | 614 |
| EcoRII | CCWGG | 1 cut(s) | 61 |
| EcoT14I | CCWWGG | 2 cut(s) | 235, 633 |
| ErhI | CCWWGG | 2 cut(s) | 235, 633 |
| FaeI | CATG | 5 cut(s) | 81, 239, 446, 502, 614 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 86, 118 |
| FaqI | GGGAC | 1 cut(s) | 159 |
| FatI | CATG | 5 cut(s) | 77, 235, 442, 498, 610 |
| Fnu4HI | GCNGC | 1 cut(s) | 315 |
| FokI | GGATG | 2 cut(s) | 95, 534 |
| Fsp4HI | GCNGC | 1 cut(s) | 315 |
| FspBI | CTAG | 2 cut(s) | 470, 570 |
| GluI | GCNGC | 1 cut(s) | 315 |
| HaeIII | GGCC | 3 cut(s) | 35, 213, 632 |
| Hin1II | CATG | 5 cut(s) | 81, 239, 446, 502, 614 |
| HindIII | AAGCTT | 1 cut(s) | 479 |
| HinfI | GANTC | 4 cut(s) | 52, 350, 420, 485 |
| HphI | GGTGA | 1 cut(s) | 548 |
| Hpy166II | GTNNAC | 1 cut(s) | 230 |
| Hpy188III | TCNNGA | 4 cut(s) | 347, 443, 596, 611 |
| Hpy8I | GTNNAC | 1 cut(s) | 230 |
| HpyCH4III | ACNGT | 1 cut(s) | 304 |
| HpyCH4V | TGCA | 5 cut(s) | 223, 262, 314, 457, 534 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 323, 454 |
| HpyF3I | CTNAG | 1 cut(s) | 93 |
| Hsp92II | CATG | 5 cut(s) | 81, 239, 446, 502, 614 |
| LmnI | GCTCC | 2 cut(s) | 199, 323 |
| LpnPI | CCDG | 4 cut(s) | 48, 75, 303, 443 |
| Lsp1109I | GCAGC | 1 cut(s) | 326 |
| LweI | GCATC | 1 cut(s) | 73 |
| MabI | ACCWGGT | 1 cut(s) | 61 |
| MaeI | CTAG | 2 cut(s) | 470, 570 |
| MaeIII | GTNAC | 1 cut(s) | 240 |
| MboII | GAAGA | 2 cut(s) | 145, 343 |
| MhlI | GDGCHC | 1 cut(s) | 495 |
| MluCI | AATT | 3 cut(s) | 264, 289, 614 |
| MlyI | GAGTC | 3 cut(s) | 46, 359, 429 |
| MmeI | TCCRAC | 1 cut(s) | 397 |
| MnlI | CCTC | 5 cut(s) | 80, 224, 568, 593, 618 |
| MseI | TTAA | 3 cut(s) | 140, 207, 401 |
| MspR9I | CCNGG | 1 cut(s) | 63 |
| Mva1269I | GAATGC | 1 cut(s) | 346 |
| MvaI | CCWGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 323, 454 |
| NcoI | CCATGG | 1 cut(s) | 235 |
| NlaIII | CATG | 5 cut(s) | 81, 239, 446, 502, 614 |
| NlaIV | GGNNCC | 2 cut(s) | 67, 504 |
| PaeR7I | CTCGAG | 1 cut(s) | 584 |
| PagI | TCATGA | 2 cut(s) | 442, 610 |
| PaqCI | CACCTGC | 1 cut(s) | 308 |
| PceI | AGGCCT | 1 cut(s) | 213 |
| PctI | GAATGC | 1 cut(s) | 346 |
| PfeI | GAWTC | 1 cut(s) | 485 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 42, 236 |
| PkrI | GCNGC | 1 cut(s) | 316 |
| PleI | GAGTC | 3 cut(s) | 46, 358, 428 |
| PpsI | GAGTC | 3 cut(s) | 46, 358, 428 |
| Psp6I | CCWGG | 1 cut(s) | 61 |
| PspEI | GGTNACC | 1 cut(s) | 240 |
| PspGI | CCWGG | 1 cut(s) | 61 |
| PspN4I | GGNNCC | 2 cut(s) | 67, 504 |
| PspXI | VCTCGAGB | 1 cut(s) | 584 |
| SaqAI | TTAA | 3 cut(s) | 140, 207, 401 |
| SatI | GCNGC | 1 cut(s) | 315 |
| SchI | GAGTC | 3 cut(s) | 46, 359, 429 |
| ScrFI | CCNGG | 1 cut(s) | 63 |
| SduI | GDGCHC | 1 cut(s) | 495 |
| SexAI | ACCWGGT | 1 cut(s) | 61 |
| SfaNI | GCATC | 1 cut(s) | 73 |
| Sfr274I | CTCGAG | 1 cut(s) | 584 |
| SlaI | CTCGAG | 1 cut(s) | 584 |
| SmlI | CTYRAG | 2 cut(s) | 345, 584 |
| SmoI | CTYRAG | 2 cut(s) | 345, 584 |
| Sse9I | AATT | 3 cut(s) | 264, 289, 614 |
| SseBI | AGGCCT | 1 cut(s) | 213 |
| SspMI | CTAG | 2 cut(s) | 470, 570 |
| StuI | AGGCCT | 1 cut(s) | 213 |
| StyD4I | CCNGG | 1 cut(s) | 61 |
| StyI | CCWWGG | 2 cut(s) | 235, 633 |
| TaaI | ACNGT | 1 cut(s) | 304 |
| TaqI | TCGA | 1 cut(s) | 585 |
| TasI | AATT | 3 cut(s) | 264, 289, 614 |
| TfiI | GAWTC | 1 cut(s) | 485 |
| Tru1I | TTAA | 3 cut(s) | 140, 207, 401 |
| Tru9I | TTAA | 3 cut(s) | 140, 207, 401 |
| TseI | GCWGC | 1 cut(s) | 314 |
| TspDTI | ATGAA | 3 cut(s) | 441, 531, 627 |
| TspGWI | ACGGA | 1 cut(s) | 478 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 42, 236 |
| XapI | RAATTY | 2 cut(s) | 264, 614 |
| XhoI | CTCGAG | 1 cut(s) | 584 |
| XspI | CTAG | 2 cut(s) | 470, 570 |