tRNA rRNA methyltransferase (SpoU) family protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1407 |
| Acc36I | ACCTGC | 1 cut(s) | 91 |
| Acc65I | GGTACC | 1 cut(s) | 103 |
| AccB1I | GGYRCC | 1 cut(s) | 103 |
| AccII | CGCG | 2 cut(s) | 1327, 2160 |
| AciI | CCGC | 2 cut(s) | 1760, 1844 |
| AclI | AACGTT | 2 cut(s) | 702, 1906 |
| AclWI | GGATC | 1 cut(s) | 183 |
| AcuI | CTGAAG | 1 cut(s) | 2061 |
| AdeI | CACNNNGTG | 1 cut(s) | 1840 |
| AfaI | GTAC | 4 cut(s) | 105, 243, 262, 1727 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 168, 1552, 1850 |
| AflII | CTTAAG | 1 cut(s) | 1004 |
| AflIII | ACRYGT | 1 cut(s) | 1372 |
| AhlI | ACTAGT | 1 cut(s) | 263 |
| AjnI | CCWGG | 2 cut(s) | 1316, 1891 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 52, 84 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 296, 328 |
| AluBI | AGCT | 1 cut(s) | 2081 |
| AluI | AGCT | 1 cut(s) | 2081 |
| Alw26I | GTCTC | 1 cut(s) | 48 |
| AlwI | GGATC | 1 cut(s) | 183 |
| AoxI | GGCC | 3 cut(s) | 1588, 1640, 1689 |
| ApaI | GGGCCC | 1 cut(s) | 1693 |
| ApeKI | GCWGC | 2 cut(s) | 8, 351 |
| Asp718I | GGTACC | 1 cut(s) | 103 |
| AspA2I | CCTAGG | 2 cut(s) | 13, 1685 |
| AspLEI | GCGC | 2 cut(s) | 2160, 2162 |
| AspS9I | GGNCC | 3 cut(s) | 1640, 1689, 1690 |
| AsuHPI | GGTGA | 3 cut(s) | 446, 839, 2030 |
| AvrII | CCTAGG | 2 cut(s) | 13, 1685 |
| AxyI | CCTNAGG | 1 cut(s) | 2186 |
| BaeGI | GKGCMC | 1 cut(s) | 1693 |
| BanI | GGYRCC | 1 cut(s) | 103 |
| BanII | GRGCYC | 1 cut(s) | 1693 |
| BbvI | GCAGC | 1 cut(s) | 338 |
| BccI | CCATC | 2 cut(s) | 294, 1784 |
| BceAI | ACGGC | 1 cut(s) | 1859 |
| BciT130I | CCWGG | 2 cut(s) | 1318, 1893 |
| BciVI | GTATCC | 1 cut(s) | 1323 |
| BcoDI | GTCTC | 1 cut(s) | 48 |
| BcuI | ACTAGT | 1 cut(s) | 263 |
| BfaI | CTAG | 8 cut(s) | 14, 36, 264, 321, 771, 1386, 1686, 2060 |
| BfmI | CTRYAG | 2 cut(s) | 756, 1770 |
| BfrI | CTTAAG | 1 cut(s) | 1004 |
| BfuAI | ACCTGC | 1 cut(s) | 91 |
| BfuI | GTATCC | 1 cut(s) | 1323 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 17 |
| BisI | GCNGC | 4 cut(s) | 9, 352, 1760, 1844 |
| BlnI | CCTAGG | 2 cut(s) | 13, 1685 |
| BlsI | GCNGC | 4 cut(s) | 10, 353, 1761, 1845 |
| Bme1390I | CCNGG | 2 cut(s) | 1318, 1893 |
| BmgT120I | GGNCC | 3 cut(s) | 1640, 1689, 1690 |
| BmiI | GGNNCC | 3 cut(s) | 105, 152, 1691 |
| BmrFI | CCNGG | 2 cut(s) | 1318, 1893 |
| BmrI | ACTGGG | 1 cut(s) | 102 |
| BmsI | GCATC | 1 cut(s) | 2046 |
| BmuI | ACTGGG | 1 cut(s) | 102 |
| Bpu10I | CCTNAGC | 2 cut(s) | 370, 1870 |
| BpuEI | CTTGAG | 1 cut(s) | 712 |
| BsaJI | CCNNGG | 4 cut(s) | 13, 609, 1316, 1685 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 296, 326, 399, 429 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 168, 1552, 1850 |
| Bse1I | ACTGG | 2 cut(s) | 108, 1470 |
| Bse21I | CCTNAGG | 1 cut(s) | 2186 |
| Bse3DI | GCAATG | 1 cut(s) | 20 |
| BseBI | CCWGG | 2 cut(s) | 1318, 1893 |
| BseDI | CCNNGG | 4 cut(s) | 13, 609, 1316, 1685 |
| BseGI | GGATG | 7 cut(s) | 241, 595, 677, 1466, 1712, 1783, 1888 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 168, 1552, 1850 |
| BseMI | GCAATG | 1 cut(s) | 20 |
| BseMII | CTCAG | 1 cut(s) | 674 |
| BseNI | ACTGG | 2 cut(s) | 108, 1470 |
| BsePI | GCGCGC | 1 cut(s) | 2158 |
| BseRI | GAGGAG | 2 cut(s) | 236, 1869 |
| BseSI | GKGCMC | 1 cut(s) | 1693 |
| BseXI | GCAGC | 1 cut(s) | 338 |
| BsgI | GTGCAG | 2 cut(s) | 119, 971 |
| Bsh1236I | CGCG | 2 cut(s) | 1327, 2160 |
| BshFI | GGCC | 3 cut(s) | 1590, 1642, 1691 |
| BshNI | GGYRCC | 1 cut(s) | 103 |
| BslFI | GGGAC | 1 cut(s) | 988 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 168, 1552, 1850 |
| BsmAI | GTCTC | 1 cut(s) | 48 |
| BsmFI | GGGAC | 1 cut(s) | 988 |
| BsmI | GAATGC | 4 cut(s) | 282, 747, 1132, 1341 |
| BsnI | GGCC | 3 cut(s) | 1590, 1642, 1691 |
| Bsp120I | GGGCCC | 1 cut(s) | 1689 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1693 |
| Bsp143I | GATC | 3 cut(s) | 175, 1355, 2133 |
| BspACI | CCGC | 2 cut(s) | 1760, 1844 |
| BspANI | GGCC | 3 cut(s) | 1590, 1642, 1691 |
| BspCNI | CTCAG | 1 cut(s) | 675 |
| BspFNI | CGCG | 2 cut(s) | 1327, 2160 |
| BspHI | TCATGA | 3 cut(s) | 1350, 2010, 2103 |
| BspLI | GGNNCC | 3 cut(s) | 105, 152, 1691 |
| BspMI | ACCTGC | 1 cut(s) | 91 |
| BspPI | GGATC | 1 cut(s) | 183 |
| BspT107I | GGYRCC | 1 cut(s) | 103 |
| BspTI | CTTAAG | 1 cut(s) | 1004 |
| BsrDI | GCAATG | 1 cut(s) | 20 |
| BsrI | ACTGG | 2 cut(s) | 108, 1470 |
| BssECI | CCNNGG | 4 cut(s) | 13, 609, 1316, 1685 |
| BssHII | GCGCGC | 1 cut(s) | 2158 |
| BssMI | GATC | 3 cut(s) | 175, 1355, 2133 |
| BssT1I | CCWWGG | 3 cut(s) | 13, 609, 1685 |
| Bst2UI | CCWGG | 2 cut(s) | 1318, 1893 |
| Bst4CI | ACNGT | 1 cut(s) | 484 |
| Bst6I | CTCTTC | 1 cut(s) | 1855 |
| BstAFI | CTTAAG | 1 cut(s) | 1004 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 279 |
| BstC8I | GCNNGC | 3 cut(s) | 994, 2044, 2160 |
| BstF5I | GGATG | 7 cut(s) | 241, 595, 677, 1466, 1712, 1783, 1888 |
| BstFNI | CGCG | 2 cut(s) | 1327, 2160 |
| BstHHI | GCGC | 2 cut(s) | 2160, 2162 |
| BstKTI | GATC | 3 cut(s) | 178, 1358, 2136 |
| BstMAI | GTCTC | 1 cut(s) | 48 |
| BstMBI | GATC | 3 cut(s) | 175, 1355, 2133 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 17, 31, 279, 1975 |
| BstNI | CCWGG | 2 cut(s) | 1318, 1893 |
| BstNSI | RCATGY | 5 cut(s) | 230, 648, 1376, 1503, 2046 |
| BstSCI | CCNGG | 2 cut(s) | 1316, 1891 |
| BstSFI | CTRYAG | 2 cut(s) | 756, 1770 |
| BstSLI | GKGCMC | 1 cut(s) | 1693 |
| BstUI | CGCG | 2 cut(s) | 1327, 2160 |
| BstV1I | GCAGC | 1 cut(s) | 338 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2186 |
| BsuI | GTATCC | 1 cut(s) | 1323 |
| BsuRI | GGCC | 3 cut(s) | 1590, 1642, 1691 |
| BtsCI | GGATG | 7 cut(s) | 241, 595, 677, 1466, 1712, 1783, 1888 |
| BtsIMutI | CAGTG | 1 cut(s) | 480 |
| BveI | ACCTGC | 1 cut(s) | 91 |
| Cac8I | GCNNGC | 3 cut(s) | 994, 2044, 2160 |
| CciI | TCATGA | 3 cut(s) | 1350, 2010, 2103 |
| CfoI | GCGC | 2 cut(s) | 2160, 2162 |
| Cfr13I | GGNCC | 3 cut(s) | 1640, 1689, 1690 |
| CseI | GACGC | 1 cut(s) | 1316 |
| Csp6I | GTAC | 4 cut(s) | 104, 242, 261, 1726 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 423, 458 |
| CviQI | GTAC | 4 cut(s) | 104, 242, 261, 1726 |
| DpnI | GATC | 3 cut(s) | 177, 1357, 2135 |
| DpnII | GATC | 3 cut(s) | 175, 1355, 2133 |
| DraI | TTTAAA | 2 cut(s) | 1291, 1942 |
| DraIII | CACNNNGTG | 1 cut(s) | 1840 |
| Eam1104I | CTCTTC | 1 cut(s) | 1855 |
| EarI | CTCTTC | 1 cut(s) | 1855 |
| Eco130I | CCWWGG | 3 cut(s) | 13, 609, 1685 |
| Eco147I | AGGCCT | 1 cut(s) | 1590 |
| Eco24I | GRGCYC | 1 cut(s) | 1693 |
| Eco57I | CTGAAG | 1 cut(s) | 2061 |
| Eco81I | CCTNAGG | 1 cut(s) | 2186 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1689, 1690 |
| EcoRI | GAATTC | 3 cut(s) | 1144, 1487, 2021 |
| EcoRII | CCWGG | 2 cut(s) | 1316, 1891 |
| EcoT14I | CCWWGG | 3 cut(s) | 13, 609, 1685 |
| EcoT22I | ATGCAT | 2 cut(s) | 284, 2048 |
| EcoT38I | GRGCYC | 1 cut(s) | 1693 |
| ErhI | CCWWGG | 3 cut(s) | 13, 609, 1685 |
| FaqI | GGGAC | 1 cut(s) | 988 |
| FauNDI | CATATG | 2 cut(s) | 1307, 1412 |
| Fnu4HI | GCNGC | 4 cut(s) | 9, 352, 1760, 1844 |
| FokI | GGATG | 7 cut(s) | 248, 602, 664, 1453, 1699, 1770, 1875 |
| FriOI | GRGCYC | 1 cut(s) | 1693 |
| Fsp4HI | GCNGC | 4 cut(s) | 9, 352, 1760, 1844 |
| FspBI | CTAG | 8 cut(s) | 14, 36, 264, 321, 771, 1386, 1686, 2060 |
| GlaI | GCGC | 2 cut(s) | 2159, 2161 |
| GluI | GCNGC | 4 cut(s) | 9, 352, 1760, 1844 |
| HaeIII | GGCC | 3 cut(s) | 1590, 1642, 1691 |
| HgaI | GACGC | 1 cut(s) | 1316 |
| HhaI | GCGC | 2 cut(s) | 2160, 2162 |
| Hin6I | GCGC | 2 cut(s) | 2158, 2160 |
| HinP1I | GCGC | 2 cut(s) | 2158, 2160 |
| HinfI | GANTC | 4 cut(s) | 447, 869, 1574, 1865 |
| HphI | GGTGA | 3 cut(s) | 446, 839, 2030 |
| Hpy166II | GTNNAC | 3 cut(s) | 418, 616, 1428 |
| Hpy188I | TCNGA | 4 cut(s) | 503, 1579, 2055, 2198 |
| Hpy188III | TCNNGA | 6 cut(s) | 1259, 1351, 1386, 2011, 2104, 2120 |
| Hpy8I | GTNNAC | 3 cut(s) | 418, 616, 1428 |
| HpyAV | CCTTC | 6 cut(s) | 99, 197, 351, 646, 650, 965 |
| HpyCH4III | ACNGT | 1 cut(s) | 484 |
| HpyCH4IV | ACGT | 2 cut(s) | 702, 1906 |
| HpyCH4V | TGCA | 9 cut(s) | 100, 282, 434, 952, 1132, 1964, 1978, 2042, 2046 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 17, 31, 279, 1975 |
| HpySE526I | ACGT | 2 cut(s) | 702, 1906 |
| HspAI | GCGC | 2 cut(s) | 2158, 2160 |
| KpnI | GGTACC | 1 cut(s) | 107 |
| Kzo9I | GATC | 3 cut(s) | 175, 1355, 2133 |
| LmnI | GCTCC | 3 cut(s) | 129, 223, 611 |
| Lsp1109I | GCAGC | 1 cut(s) | 338 |
| LweI | GCATC | 1 cut(s) | 2046 |
| MaeI | CTAG | 8 cut(s) | 14, 36, 264, 321, 771, 1386, 1686, 2060 |
| MaeII | ACGT | 2 cut(s) | 702, 1906 |
| MaeIII | GTNAC | 8 cut(s) | 84, 577, 640, 686, 1236, 1434, 1462, 1502 |
| MalI | GATC | 3 cut(s) | 177, 1357, 2135 |
| MboI | GATC | 3 cut(s) | 175, 1355, 2133 |
| MboII | GAAGA | 8 cut(s) | 309, 1064, 1067, 1070, 1079, 1082, 1437, 1872 |
| MhlI | GDGCHC | 1 cut(s) | 1693 |
| MnlI | CCTC | 9 cut(s) | 166, 214, 257, 401, 1004, 1659, 1798, 1847, 1850 |
| Mph1103I | ATGCAT | 2 cut(s) | 284, 2048 |
| MslI | CAYNNNNRTG | 1 cut(s) | 137 |
| MspCI | CTTAAG | 1 cut(s) | 1004 |
| MspR9I | CCNGG | 2 cut(s) | 1318, 1893 |
| Mva1269I | GAATGC | 4 cut(s) | 282, 747, 1132, 1341 |
| MvaI | CCWGG | 2 cut(s) | 1318, 1893 |
| MvnI | CGCG | 2 cut(s) | 1327, 2160 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 17, 31, 279, 1975 |
| NdeI | CATATG | 2 cut(s) | 1307, 1412 |
| NdeII | GATC | 3 cut(s) | 175, 1355, 2133 |
| NlaIV | GGNNCC | 3 cut(s) | 105, 152, 1691 |
| NmuCI | GTSAC | 2 cut(s) | 686, 1502 |
| NsiI | ATGCAT | 2 cut(s) | 284, 2048 |
| NspI | RCATGY | 5 cut(s) | 230, 648, 1376, 1503, 2046 |
| PaeI | GCATGC | 1 cut(s) | 2046 |
| PagI | TCATGA | 3 cut(s) | 1350, 2010, 2103 |
| PauI | GCGCGC | 1 cut(s) | 2158 |
| PceI | AGGCCT | 1 cut(s) | 1590 |
| PciI | ACATGT | 1 cut(s) | 1372 |
| PctI | GAATGC | 4 cut(s) | 282, 747, 1132, 1341 |
| PfeI | GAWTC | 4 cut(s) | 447, 869, 1574, 1865 |
| PfoI | TCCNGGA | 1 cut(s) | 1891 |
| PkrI | GCNGC | 4 cut(s) | 10, 353, 1761, 1845 |
| PscI | ACATGT | 1 cut(s) | 1372 |
| PsiI | TTATAA | 1 cut(s) | 1407 |
| Psp1406I | AACGTT | 2 cut(s) | 702, 1906 |
| Psp6I | CCWGG | 2 cut(s) | 1316, 1891 |
| PspGI | CCWGG | 2 cut(s) | 1316, 1891 |
| PspN4I | GGNNCC | 3 cut(s) | 105, 152, 1691 |
| PspOMI | GGGCCC | 1 cut(s) | 1689 |
| PspPI | GGNCC | 3 cut(s) | 1640, 1689, 1690 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1304, 1336 |
| PteI | GCGCGC | 1 cut(s) | 2158 |
| RsaI | GTAC | 4 cut(s) | 105, 243, 262, 1727 |
| RsaNI | GTAC | 4 cut(s) | 104, 242, 261, 1726 |
| RseI | CAYNNNNRTG | 1 cut(s) | 137 |
| SatI | GCNGC | 4 cut(s) | 9, 352, 1760, 1844 |
| Sau3AI | GATC | 3 cut(s) | 175, 1355, 2133 |
| Sau96I | GGNCC | 3 cut(s) | 1640, 1689, 1690 |
| ScrFI | CCNGG | 2 cut(s) | 1318, 1893 |
| SduI | GDGCHC | 1 cut(s) | 1693 |
| SfaNI | GCATC | 1 cut(s) | 2046 |
| SfcI | CTRYAG | 2 cut(s) | 756, 1770 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 137 |
| SmlI | CTYRAG | 2 cut(s) | 691, 1004 |
| SmoI | CTYRAG | 2 cut(s) | 691, 1004 |
| SpeI | ACTAGT | 1 cut(s) | 263 |
| SphI | GCATGC | 1 cut(s) | 2046 |
| SseBI | AGGCCT | 1 cut(s) | 1590 |
| SsiI | CCGC | 2 cut(s) | 1760, 1844 |
| SspMI | CTAG | 8 cut(s) | 14, 36, 264, 321, 771, 1386, 1686, 2060 |
| StuI | AGGCCT | 1 cut(s) | 1590 |
| StyD4I | CCNGG | 2 cut(s) | 1316, 1891 |
| StyI | CCWWGG | 3 cut(s) | 13, 609, 1685 |
| TaaI | ACNGT | 1 cut(s) | 484 |
| TaiI | ACGT | 2 cut(s) | 705, 1909 |
| TaqI | TCGA | 2 cut(s) | 112, 219 |
| TauI | GCSGC | 2 cut(s) | 1762, 1846 |
| TfiI | GAWTC | 4 cut(s) | 447, 869, 1574, 1865 |
| TscAI | CASTG | 1 cut(s) | 487 |
| TseFI | GTSAC | 2 cut(s) | 686, 1502 |
| TseI | GCWGC | 2 cut(s) | 8, 351 |
| Tsp45I | GTSAC | 2 cut(s) | 686, 1502 |
| TspGWI | ACGGA | 1 cut(s) | 1031 |
| TspRI | CASTG | 1 cut(s) | 487 |
| Vha464I | CTTAAG | 1 cut(s) | 1004 |
| XbaI | TCTAGA | 1 cut(s) | 1385 |
| XceI | RCATGY | 5 cut(s) | 230, 648, 1376, 1503, 2046 |
| XmaJI | CCTAGG | 2 cut(s) | 13, 1685 |
| XspI | CTAG | 8 cut(s) | 14, 36, 264, 321, 771, 1386, 1686, 2060 |
| Zsp2I | ATGCAT | 2 cut(s) | 284, 2048 |