transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 166 |
| AclWI | GGATC | 1 cut(s) | 422 |
| AcsI | RAATTY | 3 cut(s) | 24, 114, 144 |
| AgsI | TTSAA | 4 cut(s) | 31, 262, 320, 352 |
| AjnI | CCWGG | 1 cut(s) | 250 |
| AluBI | AGCT | 2 cut(s) | 34, 97 |
| AluI | AGCT | 2 cut(s) | 34, 97 |
| Alw26I | GTCTC | 3 cut(s) | 235, 374, 380 |
| AlwI | GGATC | 1 cut(s) | 422 |
| ApeKI | GCWGC | 2 cut(s) | 94, 409 |
| ApoI | RAATTY | 3 cut(s) | 24, 114, 144 |
| AspLEI | GCGC | 1 cut(s) | 159 |
| AspS9I | GGNCC | 1 cut(s) | 278 |
| AsuHPI | GGTGA | 1 cut(s) | 91 |
| AsuII | TTCGAA | 1 cut(s) | 201 |
| AvaII | GGWCC | 1 cut(s) | 278 |
| BbvI | GCAGC | 2 cut(s) | 106, 421 |
| BccI | CCATC | 1 cut(s) | 100 |
| BciT130I | CCWGG | 1 cut(s) | 252 |
| BcoDI | GTCTC | 3 cut(s) | 235, 374, 380 |
| BfaI | CTAG | 1 cut(s) | 38 |
| BisI | GCNGC | 2 cut(s) | 95, 410 |
| BlsI | GCNGC | 2 cut(s) | 96, 411 |
| Bme1390I | CCNGG | 1 cut(s) | 252 |
| Bme18I | GGWCC | 1 cut(s) | 278 |
| BmgT120I | GGNCC | 1 cut(s) | 278 |
| BmrFI | CCNGG | 1 cut(s) | 252 |
| Bpu14I | TTCGAA | 1 cut(s) | 201 |
| BpuEI | CTTGAG | 1 cut(s) | 352 |
| BsaJI | CCNNGG | 1 cut(s) | 307 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 415 |
| Bse3DI | GCAATG | 1 cut(s) | 89 |
| BseBI | CCWGG | 1 cut(s) | 252 |
| BseDI | CCNNGG | 1 cut(s) | 307 |
| BseMI | GCAATG | 1 cut(s) | 89 |
| BseMII | CTCAG | 1 cut(s) | 230 |
| BseXI | GCAGC | 2 cut(s) | 106, 421 |
| BsmAI | GTCTC | 3 cut(s) | 235, 374, 380 |
| BsmBI | CGTCTC | 1 cut(s) | 374 |
| BsmI | GAATGC | 1 cut(s) | 142 |
| Bsp119I | TTCGAA | 1 cut(s) | 201 |
| Bsp143I | GATC | 1 cut(s) | 427 |
| Bsp19I | CCATGG | 1 cut(s) | 307 |
| BspACI | CCGC | 1 cut(s) | 166 |
| BspCNI | CTCAG | 1 cut(s) | 231 |
| BspHI | TCATGA | 1 cut(s) | 172 |
| BspPI | GGATC | 1 cut(s) | 422 |
| BspT104I | TTCGAA | 1 cut(s) | 201 |
| BsrDI | GCAATG | 1 cut(s) | 89 |
| BssECI | CCNNGG | 1 cut(s) | 307 |
| BssMI | GATC | 1 cut(s) | 427 |
| BssT1I | CCWWGG | 1 cut(s) | 307 |
| Bst2UI | CCWGG | 1 cut(s) | 252 |
| BstBI | TTCGAA | 1 cut(s) | 201 |
| BstDEI | CTNAG | 1 cut(s) | 239 |
| BstDSI | CCRYGG | 1 cut(s) | 307 |
| BstEII | GGTNACC | 1 cut(s) | 79 |
| BstHHI | GCGC | 1 cut(s) | 159 |
| BstKTI | GATC | 1 cut(s) | 430 |
| BstMAI | GTCTC | 3 cut(s) | 235, 374, 380 |
| BstMBI | GATC | 1 cut(s) | 427 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 163 |
| BstNI | CCWGG | 1 cut(s) | 252 |
| BstNSI | RCATGY | 1 cut(s) | 416 |
| BstPI | GGTNACC | 1 cut(s) | 79 |
| BstSCI | CCNGG | 1 cut(s) | 250 |
| BstV1I | GCAGC | 2 cut(s) | 106, 421 |
| BtgI | CCRYGG | 1 cut(s) | 307 |
| BtsIMutI | CAGTG | 1 cut(s) | 423 |
| CciI | TCATGA | 1 cut(s) | 172 |
| CfoI | GCGC | 1 cut(s) | 159 |
| Cfr13I | GGNCC | 1 cut(s) | 278 |
| CviAII | CATG | 3 cut(s) | 173, 308, 413 |
| CviJI | RGCY | 3 cut(s) | 34, 72, 97 |
| CviKI_1 | RGCY | 3 cut(s) | 34, 72, 97 |
| DdeI | CTNAG | 1 cut(s) | 239 |
| DpnI | GATC | 1 cut(s) | 429 |
| DpnII | GATC | 1 cut(s) | 427 |
| Eco130I | CCWWGG | 1 cut(s) | 307 |
| Eco47I | GGWCC | 1 cut(s) | 278 |
| Eco91I | GGTNACC | 1 cut(s) | 79 |
| EcoO109I | RGGNCCY | 1 cut(s) | 278 |
| EcoO65I | GGTNACC | 1 cut(s) | 79 |
| EcoRII | CCWGG | 1 cut(s) | 250 |
| EcoT14I | CCWWGG | 1 cut(s) | 307 |
| ErhI | CCWWGG | 1 cut(s) | 307 |
| Esp3I | CGTCTC | 1 cut(s) | 374 |
| FaeI | CATG | 3 cut(s) | 176, 311, 416 |
| FaiI | YATR | 8 cut(s) | 53, 55, 132, 174, 226, 228, 309, 414 |
| FatI | CATG | 3 cut(s) | 172, 307, 412 |
| Fnu4HI | GCNGC | 2 cut(s) | 95, 410 |
| Fsp4HI | GCNGC | 2 cut(s) | 95, 410 |
| FspBI | CTAG | 1 cut(s) | 38 |
| GlaI | GCGC | 1 cut(s) | 158 |
| GluI | GCNGC | 2 cut(s) | 95, 410 |
| HhaI | GCGC | 1 cut(s) | 159 |
| Hin1II | CATG | 3 cut(s) | 176, 311, 416 |
| Hin6I | GCGC | 1 cut(s) | 157 |
| HinP1I | GCGC | 1 cut(s) | 157 |
| HincII | GTYRAC | 1 cut(s) | 365 |
| HindII | GTYRAC | 1 cut(s) | 365 |
| HinfI | GANTC | 2 cut(s) | 125, 243 |
| HphI | GGTGA | 1 cut(s) | 91 |
| Hpy166II | GTNNAC | 1 cut(s) | 365 |
| Hpy188I | TCNGA | 2 cut(s) | 22, 67 |
| Hpy188III | TCNNGA | 3 cut(s) | 173, 234, 325 |
| Hpy8I | GTNNAC | 1 cut(s) | 365 |
| HpyAV | CCTTC | 1 cut(s) | 430 |
| HpyCH4IV | ACGT | 1 cut(s) | 367 |
| HpyCH4V | TGCA | 2 cut(s) | 94, 140 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 163 |
| HpyF3I | CTNAG | 1 cut(s) | 239 |
| HpySE526I | ACGT | 1 cut(s) | 367 |
| Hsp92II | CATG | 3 cut(s) | 176, 311, 416 |
| HspAI | GCGC | 1 cut(s) | 157 |
| Kzo9I | GATC | 1 cut(s) | 427 |
| LmnI | GCTCC | 3 cut(s) | 39, 154, 311 |
| LpnPI | CCDG | 3 cut(s) | 237, 264, 272 |
| Lsp1109I | GCAGC | 2 cut(s) | 106, 421 |
| MaeI | CTAG | 1 cut(s) | 38 |
| MaeII | ACGT | 1 cut(s) | 367 |
| MaeIII | GTNAC | 2 cut(s) | 79, 289 |
| MalI | GATC | 1 cut(s) | 429 |
| MboI | GATC | 1 cut(s) | 427 |
| MboII | GAAGA | 1 cut(s) | 340 |
| MfeI | CAATTG | 1 cut(s) | 315 |
| MluCI | AATT | 5 cut(s) | 24, 60, 114, 144, 315 |
| MlyI | GAGTC | 2 cut(s) | 134, 237 |
| MmeI | TCCRAC | 1 cut(s) | 25 |
| MnlI | CCTC | 3 cut(s) | 103, 327, 441 |
| MspA1I | CMGCKG | 1 cut(s) | 97 |
| MspR9I | CCNGG | 1 cut(s) | 252 |
| MunI | CAATTG | 1 cut(s) | 315 |
| Mva1269I | GAATGC | 1 cut(s) | 142 |
| MvaI | CCWGG | 1 cut(s) | 252 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 163 |
| NcoI | CCATGG | 1 cut(s) | 307 |
| NdeII | GATC | 1 cut(s) | 427 |
| NlaIII | CATG | 3 cut(s) | 176, 311, 416 |
| NmuCI | GTSAC | 1 cut(s) | 79 |
| NspI | RCATGY | 1 cut(s) | 416 |
| NspV | TTCGAA | 1 cut(s) | 201 |
| PagI | TCATGA | 1 cut(s) | 172 |
| PctI | GAATGC | 1 cut(s) | 142 |
| PfoI | TCCNGGA | 1 cut(s) | 250 |
| PkrI | GCNGC | 2 cut(s) | 96, 411 |
| PleI | GAGTC | 2 cut(s) | 133, 237 |
| PpsI | GAGTC | 2 cut(s) | 133, 237 |
| PpuMI | RGGWCCY | 1 cut(s) | 278 |
| Psp5II | RGGWCCY | 1 cut(s) | 278 |
| Psp6I | CCWGG | 1 cut(s) | 250 |
| PspEI | GGTNACC | 1 cut(s) | 79 |
| PspGI | CCWGG | 1 cut(s) | 250 |
| PspPI | GGNCC | 1 cut(s) | 278 |
| PspPPI | RGGWCCY | 1 cut(s) | 278 |
| PvuII | CAGCTG | 1 cut(s) | 97 |
| SatI | GCNGC | 2 cut(s) | 95, 410 |
| Sau3AI | GATC | 1 cut(s) | 427 |
| Sau96I | GGNCC | 1 cut(s) | 278 |
| SchI | GAGTC | 2 cut(s) | 134, 237 |
| ScrFI | CCNGG | 1 cut(s) | 252 |
| SetI | ASST | 7 cut(s) | 36, 99, 219, 280, 300, 370, 379 |
| SfuI | TTCGAA | 1 cut(s) | 201 |
| SinI | GGWCC | 1 cut(s) | 278 |
| SmlI | CTYRAG | 1 cut(s) | 331 |
| SmoI | CTYRAG | 1 cut(s) | 331 |
| Sse9I | AATT | 5 cut(s) | 24, 60, 114, 144, 315 |
| SsiI | CCGC | 1 cut(s) | 166 |
| SspMI | CTAG | 1 cut(s) | 38 |
| StyD4I | CCNGG | 1 cut(s) | 250 |
| StyI | CCWWGG | 1 cut(s) | 307 |
| TaiI | ACGT | 1 cut(s) | 370 |
| TaqI | TCGA | 2 cut(s) | 201, 235 |
| TasI | AATT | 5 cut(s) | 24, 60, 114, 144, 315 |
| TscAI | CASTG | 1 cut(s) | 430 |
| TseFI | GTSAC | 1 cut(s) | 79 |
| TseI | GCWGC | 2 cut(s) | 94, 409 |
| Tsp45I | GTSAC | 1 cut(s) | 79 |
| TspDTI | ATGAA | 2 cut(s) | 17, 161 |
| TspRI | CASTG | 1 cut(s) | 430 |
| VpaK11BI | GGWCC | 1 cut(s) | 278 |
| XapI | RAATTY | 3 cut(s) | 24, 114, 144 |
| XceI | RCATGY | 1 cut(s) | 416 |
| XspI | CTAG | 1 cut(s) | 38 |