tRNA rRNA methyltransferase (SpoU) family protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 840 |
| Acc36I | ACCTGC | 1 cut(s) | 292 |
| Acc65I | GGTACC | 1 cut(s) | 742 |
| AccB1I | GGYRCC | 1 cut(s) | 742 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 433 |
| AccI | GTMKAC | 1 cut(s) | 336 |
| AccIII | TCCGGA | 1 cut(s) | 1570 |
| AclI | AACGTT | 1 cut(s) | 73 |
| AclWI | GGATC | 1 cut(s) | 384 |
| AcoI | YGGCCR | 1 cut(s) | 174 |
| AcsI | RAATTY | 7 cut(s) | 633, 996, 1137, 1197, 1313, 1381, 1670 |
| AcyI | GRCGYC | 1 cut(s) | 333 |
| AfaI | GTAC | 4 cut(s) | 49, 180, 744, 802 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 369, 433 |
| AflIII | ACRYGT | 1 cut(s) | 1557 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 253, 285 |
| Alw21I | GWGCWC | 2 cut(s) | 138, 147 |
| Alw26I | GTCTC | 1 cut(s) | 249 |
| AlwI | GGATC | 1 cut(s) | 384 |
| Aor13HI | TCCGGA | 1 cut(s) | 1570 |
| AoxI | GGCC | 1 cut(s) | 174 |
| ApoI | RAATTY | 7 cut(s) | 633, 996, 1137, 1197, 1313, 1381, 1670 |
| AseI | ATTAAT | 1 cut(s) | 936 |
| Asp718I | GGTACC | 1 cut(s) | 742 |
| AspA2I | CCTAGG | 1 cut(s) | 214 |
| AspS9I | GGNCC | 1 cut(s) | 1300 |
| AsuHPI | GGTGA | 2 cut(s) | 642, 1360 |
| AvaII | GGWCC | 1 cut(s) | 1300 |
| AvrII | CCTAGG | 1 cut(s) | 214 |
| AxyI | CCTNAGG | 1 cut(s) | 183 |
| BaeGI | GKGCMC | 1 cut(s) | 1242 |
| BanI | GGYRCC | 1 cut(s) | 742 |
| Bbv12I | GWGCWC | 2 cut(s) | 138, 147 |
| BccI | CCATC | 4 cut(s) | 119, 196, 662, 806 |
| BceAI | ACGGC | 1 cut(s) | 161 |
| BcoDI | GTCTC | 1 cut(s) | 249 |
| BfaI | CTAG | 5 cut(s) | 102, 215, 237, 468, 993 |
| BfmI | CTRYAG | 2 cut(s) | 346, 978 |
| BfuAI | ACCTGC | 1 cut(s) | 292 |
| BlnI | CCTAGG | 1 cut(s) | 214 |
| Bme18I | GGWCC | 1 cut(s) | 1300 |
| BmgT120I | GGNCC | 1 cut(s) | 1300 |
| BmiI | GGNNCC | 4 cut(s) | 306, 353, 744, 1301 |
| BmsI | GCATC | 1 cut(s) | 85 |
| BpmI | CTGGAG | 1 cut(s) | 437 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1463 |
| Bsa29I | ATCGAT | 1 cut(s) | 313 |
| BsaBI | GATNNNNATC | 1 cut(s) | 381 |
| BsaHI | GRCGYC | 1 cut(s) | 333 |
| BsaJI | CCNNGG | 2 cut(s) | 214, 1344 |
| BsaWI | WCCGGW | 1 cut(s) | 1570 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 414, 444 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 369, 433 |
| Bse1I | ACTGG | 1 cut(s) | 1653 |
| Bse21I | CCTNAGG | 1 cut(s) | 183 |
| Bse8I | GATNNNNATC | 1 cut(s) | 381 |
| BseAI | TCCGGA | 1 cut(s) | 1570 |
| BseCI | ATCGAT | 1 cut(s) | 313 |
| BseDI | CCNNGG | 2 cut(s) | 214, 1344 |
| BseGI | GGATG | 3 cut(s) | 100, 232, 817 |
| BseJI | GATNNNNATC | 1 cut(s) | 381 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 369, 433 |
| BseMII | CTCAG | 1 cut(s) | 890 |
| BseNI | ACTGG | 1 cut(s) | 1653 |
| BseRI | GAGGAG | 1 cut(s) | 144 |
| BseSI | GKGCMC | 1 cut(s) | 1242 |
| BsgI | GTGCAG | 1 cut(s) | 320 |
| BshFI | GGCC | 1 cut(s) | 176 |
| BshNI | GGYRCC | 1 cut(s) | 742 |
| BshVI | ATCGAT | 1 cut(s) | 313 |
| BsiHKAI | GWGCWC | 2 cut(s) | 138, 147 |
| BsiSI | CCGG | 1 cut(s) | 1571 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 369, 433 |
| BsmAI | GTCTC | 1 cut(s) | 249 |
| BsmI | GAATGC | 3 cut(s) | 969, 1369, 1534 |
| BsnI | GGCC | 1 cut(s) | 176 |
| Bsp1286I | GDGCHC | 3 cut(s) | 138, 147, 1242 |
| Bsp13I | TCCGGA | 1 cut(s) | 1570 |
| Bsp143I | GATC | 3 cut(s) | 376, 1147, 1548 |
| BspANI | GGCC | 1 cut(s) | 176 |
| BspCNI | CTCAG | 1 cut(s) | 891 |
| BspDI | ATCGAT | 1 cut(s) | 313 |
| BspEI | TCCGGA | 1 cut(s) | 1570 |
| BspHI | TCATGA | 1 cut(s) | 1543 |
| BspLI | GGNNCC | 4 cut(s) | 306, 353, 744, 1301 |
| BspMI | ACCTGC | 1 cut(s) | 292 |
| BspPI | GGATC | 1 cut(s) | 384 |
| BspT107I | GGYRCC | 1 cut(s) | 742 |
| BsrI | ACTGG | 1 cut(s) | 1653 |
| BssECI | CCNNGG | 2 cut(s) | 214, 1344 |
| BssMI | GATC | 3 cut(s) | 376, 1147, 1548 |
| BssNI | GRCGYC | 1 cut(s) | 333 |
| BssT1I | CCWWGG | 2 cut(s) | 214, 1344 |
| BstACI | GRCGYC | 1 cut(s) | 333 |
| BstC8I | GCNNGC | 2 cut(s) | 147, 448 |
| BstDEI | CTNAG | 8 cut(s) | 183, 737, 899, 959, 1129, 1323, 1463, 1677 |
| BstF5I | GGATG | 3 cut(s) | 100, 232, 817 |
| BstKTI | GATC | 3 cut(s) | 379, 1150, 1551 |
| BstMAI | GTCTC | 1 cut(s) | 249 |
| BstMBI | GATC | 3 cut(s) | 376, 1147, 1548 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 142 |
| BstNSI | RCATGY | 4 cut(s) | 864, 1561, 1619, 1686 |
| BstSFI | CTRYAG | 2 cut(s) | 346, 978 |
| BstSLI | GKGCMC | 1 cut(s) | 1242 |
| Bsu15I | ATCGAT | 1 cut(s) | 313 |
| Bsu36I | CCTNAGG | 1 cut(s) | 183 |
| BsuRI | GGCC | 1 cut(s) | 176 |
| BsuTUI | ATCGAT | 1 cut(s) | 313 |
| BtsCI | GGATG | 3 cut(s) | 100, 232, 817 |
| BtsIMutI | CAGTG | 1 cut(s) | 1660 |
| BveI | ACCTGC | 1 cut(s) | 292 |
| Cac8I | GCNNGC | 2 cut(s) | 147, 448 |
| CciI | TCATGA | 1 cut(s) | 1543 |
| Cfr13I | GGNCC | 1 cut(s) | 1300 |
| ClaI | ATCGAT | 1 cut(s) | 313 |
| CseI | GACGC | 2 cut(s) | 87, 322 |
| Csp6I | GTAC | 4 cut(s) | 48, 179, 743, 801 |
| CviJI | RGCY | 9 cut(s) | 176, 209, 403, 450, 912, 1078, 1086, 1454, 1467 |
| CviKI_1 | RGCY | 9 cut(s) | 176, 209, 403, 450, 912, 1078, 1086, 1454, 1467 |
| CviQI | GTAC | 4 cut(s) | 48, 179, 743, 801 |
| DdeI | CTNAG | 8 cut(s) | 183, 737, 899, 959, 1129, 1323, 1463, 1677 |
| DpnI | GATC | 3 cut(s) | 378, 1149, 1550 |
| DpnII | GATC | 3 cut(s) | 376, 1147, 1548 |
| DraI | TTTAAA | 4 cut(s) | 685, 777, 1068, 1527 |
| EaeI | YGGCCR | 1 cut(s) | 174 |
| Eco130I | CCWWGG | 2 cut(s) | 214, 1344 |
| Eco47I | GGWCC | 1 cut(s) | 1300 |
| Eco81I | CCTNAGG | 1 cut(s) | 183 |
| EcoRI | GAATTC | 5 cut(s) | 996, 1137, 1197, 1381, 1670 |
| EcoT14I | CCWWGG | 2 cut(s) | 214, 1344 |
| ErhI | CCWWGG | 2 cut(s) | 214, 1344 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1112, 1144 |
| FauNDI | CATATG | 2 cut(s) | 1101, 1597 |
| FblI | GTMKAC | 1 cut(s) | 336 |
| FokI | GGATG | 3 cut(s) | 107, 219, 824 |
| FspBI | CTAG | 5 cut(s) | 102, 215, 237, 468, 993 |
| GsuI | CTGGAG | 1 cut(s) | 437 |
| HaeIII | GGCC | 1 cut(s) | 176 |
| HapII | CCGG | 1 cut(s) | 1571 |
| HgaI | GACGC | 2 cut(s) | 87, 322 |
| Hin1I | GRCGYC | 1 cut(s) | 333 |
| HinfI | GANTC | 5 cut(s) | 423, 560, 711, 1336, 1351 |
| HpaII | CCGG | 1 cut(s) | 1571 |
| HphI | GGTGA | 2 cut(s) | 642, 1360 |
| Hpy166II | GTNNAC | 4 cut(s) | 337, 436, 613, 1613 |
| Hpy188III | TCNNGA | 5 cut(s) | 88, 102, 1258, 1544, 1571 |
| Hpy8I | GTNNAC | 4 cut(s) | 337, 436, 613, 1613 |
| HpyAV | CCTTC | 5 cut(s) | 85, 756, 862, 1175, 1591 |
| HpyCH4IV | ACGT | 2 cut(s) | 73, 438 |
| HpyCH4V | TGCA | 6 cut(s) | 301, 631, 783, 1160, 1369, 1534 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 142 |
| HpyF3I | CTNAG | 8 cut(s) | 183, 737, 899, 959, 1129, 1323, 1463, 1677 |
| HpySE526I | ACGT | 2 cut(s) | 73, 438 |
| Hsp92I | GRCGYC | 1 cut(s) | 333 |
| Kpn2I | TCCGGA | 1 cut(s) | 1570 |
| KpnI | GGTACC | 1 cut(s) | 746 |
| Kzo9I | GATC | 3 cut(s) | 376, 1147, 1548 |
| LmnI | GCTCC | 2 cut(s) | 9, 142 |
| LpnPI | CCDG | 9 cut(s) | 53, 158, 287, 355, 467, 911, 1086, 1584, 1666 |
| LweI | GCATC | 1 cut(s) | 85 |
| MaeI | CTAG | 5 cut(s) | 102, 215, 237, 468, 993 |
| MaeII | ACGT | 2 cut(s) | 73, 438 |
| MaeIII | GTNAC | 5 cut(s) | 285, 856, 951, 1471, 1685 |
| MalI | GATC | 3 cut(s) | 378, 1149, 1550 |
| MboI | GATC | 3 cut(s) | 376, 1147, 1548 |
| MhlI | GDGCHC | 3 cut(s) | 138, 147, 1242 |
| MlyI | GAGTC | 3 cut(s) | 432, 569, 720 |
| MmeI | TCCRAC | 1 cut(s) | 774 |
| MroI | TCCGGA | 1 cut(s) | 1570 |
| MslI | CAYNNNNRTG | 2 cut(s) | 758, 1556 |
| MspI | CCGG | 1 cut(s) | 1571 |
| MssI | GTTTAAAC | 1 cut(s) | 1068 |
| Mva1269I | GAATGC | 3 cut(s) | 969, 1369, 1534 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 142 |
| NdeI | CATATG | 2 cut(s) | 1101, 1597 |
| NdeII | GATC | 3 cut(s) | 376, 1147, 1548 |
| NlaIV | GGNNCC | 4 cut(s) | 306, 353, 744, 1301 |
| NspI | RCATGY | 4 cut(s) | 864, 1561, 1619, 1686 |
| PagI | TCATGA | 1 cut(s) | 1543 |
| PciI | ACATGT | 1 cut(s) | 1557 |
| PctI | GAATGC | 3 cut(s) | 969, 1369, 1534 |
| PfeI | GAWTC | 2 cut(s) | 1336, 1351 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 433 |
| PleI | GAGTC | 3 cut(s) | 431, 568, 719 |
| PmeI | GTTTAAAC | 1 cut(s) | 1068 |
| PpsI | GAGTC | 3 cut(s) | 431, 568, 719 |
| PscI | ACATGT | 1 cut(s) | 1557 |
| PshBI | ATTAAT | 1 cut(s) | 936 |
| PsiI | TTATAA | 1 cut(s) | 840 |
| Psp1406I | AACGTT | 1 cut(s) | 73 |
| PspN4I | GGNNCC | 4 cut(s) | 306, 353, 744, 1301 |
| PspPI | GGNCC | 1 cut(s) | 1300 |
| RsaI | GTAC | 4 cut(s) | 49, 180, 744, 802 |
| RsaNI | GTAC | 4 cut(s) | 48, 179, 743, 801 |
| RseI | CAYNNNNRTG | 2 cut(s) | 758, 1556 |
| Sau3AI | GATC | 3 cut(s) | 376, 1147, 1548 |
| Sau96I | GGNCC | 1 cut(s) | 1300 |
| SchI | GAGTC | 3 cut(s) | 432, 569, 720 |
| SduI | GDGCHC | 3 cut(s) | 138, 147, 1242 |
| SfaNI | GCATC | 1 cut(s) | 85 |
| SfcI | CTRYAG | 2 cut(s) | 346, 978 |
| SinI | GGWCC | 1 cut(s) | 1300 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 758, 1556 |
| SspMI | CTAG | 5 cut(s) | 102, 215, 237, 468, 993 |
| StyI | CCWWGG | 2 cut(s) | 214, 1344 |
| TaiI | ACGT | 2 cut(s) | 76, 441 |
| TaqI | TCGA | 4 cut(s) | 114, 313, 709, 1146 |
| TatI | WGTACW | 1 cut(s) | 800 |
| TfiI | GAWTC | 2 cut(s) | 1336, 1351 |
| TscAI | CASTG | 1 cut(s) | 1660 |
| TspDTI | ATGAA | 8 cut(s) | 385, 616, 961, 989, 1000, 1067, 1190, 1532 |
| TspRI | CASTG | 1 cut(s) | 1660 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 433 |
| VpaK11BI | GGWCC | 1 cut(s) | 1300 |
| VspI | ATTAAT | 1 cut(s) | 936 |
| XapI | RAATTY | 7 cut(s) | 633, 996, 1137, 1197, 1313, 1381, 1670 |
| XbaI | TCTAGA | 1 cut(s) | 101 |
| XceI | RCATGY | 4 cut(s) | 864, 1561, 1619, 1686 |
| XmaJI | CCTAGG | 1 cut(s) | 214 |
| XmiI | GTMKAC | 1 cut(s) | 336 |
| XspI | CTAG | 5 cut(s) | 102, 215, 237, 468, 993 |