transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 584 |
| AcsI | RAATTY | 6 cut(s) | 105, 296, 391, 399, 476, 570 |
| AfaI | GTAC | 2 cut(s) | 558, 692 |
| AflIII | ACRYGT | 1 cut(s) | 181 |
| AgsI | TTSAA | 6 cut(s) | 80, 197, 248, 329, 484, 563 |
| AluBI | AGCT | 3 cut(s) | 362, 539, 699 |
| AluI | AGCT | 3 cut(s) | 362, 539, 699 |
| Alw21I | GWGCWC | 1 cut(s) | 497 |
| Alw44I | GTGCAC | 1 cut(s) | 493 |
| AlwI | GGATC | 1 cut(s) | 584 |
| ApaLI | GTGCAC | 1 cut(s) | 493 |
| ApeKI | GCWGC | 3 cut(s) | 254, 539, 696 |
| ApoI | RAATTY | 6 cut(s) | 105, 296, 391, 399, 476, 570 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 7, 39 |
| AspLEI | GCGC | 1 cut(s) | 259 |
| AsuC2I | CCSGG | 1 cut(s) | 594 |
| BaeGI | GKGCMC | 1 cut(s) | 497 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 660, 692 |
| Bbv12I | GWGCWC | 1 cut(s) | 497 |
| BbvI | GCAGC | 2 cut(s) | 241, 526 |
| BcnI | CCSGG | 1 cut(s) | 594 |
| BfaI | CTAG | 2 cut(s) | 663, 700 |
| BfmI | CTRYAG | 1 cut(s) | 694 |
| BisI | GCNGC | 3 cut(s) | 255, 540, 697 |
| BlsI | GCNGC | 3 cut(s) | 256, 541, 698 |
| BmcAI | AGTACT | 1 cut(s) | 558 |
| Bme1390I | CCNGG | 1 cut(s) | 594 |
| BmiI | GGNNCC | 1 cut(s) | 279 |
| BmrFI | CCNGG | 1 cut(s) | 594 |
| BmsI | GCATC | 2 cut(s) | 25, 436 |
| BpuMI | CCSGG | 1 cut(s) | 594 |
| BsaAI | YACGTR | 1 cut(s) | 340 |
| Bse3DI | GCAATG | 1 cut(s) | 45 |
| BseGI | GGATG | 1 cut(s) | 464 |
| BseMI | GCAATG | 1 cut(s) | 45 |
| BseSI | GKGCMC | 1 cut(s) | 497 |
| BseXI | GCAGC | 2 cut(s) | 241, 526 |
| BsgI | GTGCAG | 1 cut(s) | 330 |
| BsiHKAI | GWGCWC | 1 cut(s) | 497 |
| BsiSI | CCGG | 1 cut(s) | 594 |
| Bsp1286I | GDGCHC | 1 cut(s) | 497 |
| Bsp143I | GATC | 3 cut(s) | 406, 589, 637 |
| BspLI | GGNNCC | 1 cut(s) | 279 |
| BspMAI | CTGCAG | 1 cut(s) | 698 |
| BspPI | GGATC | 1 cut(s) | 584 |
| BsrDI | GCAATG | 1 cut(s) | 45 |
| BssMI | GATC | 3 cut(s) | 406, 589, 637 |
| Bst4CI | ACNGT | 2 cut(s) | 351, 499 |
| Bst6I | CTCTTC | 1 cut(s) | 75 |
| BstBAI | YACGTR | 1 cut(s) | 340 |
| BstC8I | GCNNGC | 2 cut(s) | 210, 345 |
| BstDEI | CTNAG | 1 cut(s) | 227 |
| BstF5I | GGATG | 1 cut(s) | 464 |
| BstHHI | GCGC | 1 cut(s) | 259 |
| BstKTI | GATC | 3 cut(s) | 409, 592, 640 |
| BstMBI | GATC | 3 cut(s) | 406, 589, 637 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 10, 536 |
| BstNSI | RCATGY | 1 cut(s) | 212 |
| BstSCI | CCNGG | 1 cut(s) | 592 |
| BstSFI | CTRYAG | 1 cut(s) | 694 |
| BstSLI | GKGCMC | 1 cut(s) | 497 |
| BstV1I | GCAGC | 2 cut(s) | 241, 526 |
| BstX2I | RGATCY | 1 cut(s) | 589 |
| BstYI | RGATCY | 1 cut(s) | 589 |
| BtsCI | GGATG | 1 cut(s) | 464 |
| BtsIMutI | CAGTG | 1 cut(s) | 495 |
| Cac8I | GCNNGC | 2 cut(s) | 210, 345 |
| CfoI | GCGC | 1 cut(s) | 259 |
| Csp6I | GTAC | 2 cut(s) | 557, 691 |
| CviAII | CATG | 2 cut(s) | 209, 545 |
| CviJI | RGCY | 3 cut(s) | 362, 539, 699 |
| CviKI_1 | RGCY | 3 cut(s) | 362, 539, 699 |
| CviQI | GTAC | 2 cut(s) | 557, 691 |
| DdeI | CTNAG | 1 cut(s) | 227 |
| DpnI | GATC | 3 cut(s) | 408, 591, 639 |
| DpnII | GATC | 3 cut(s) | 406, 589, 637 |
| Eam1104I | CTCTTC | 1 cut(s) | 75 |
| EarI | CTCTTC | 1 cut(s) | 75 |
| FaeI | CATG | 2 cut(s) | 212, 548 |
| FaiI | YATR | 7 cut(s) | 33, 54, 62, 210, 471, 513, 546 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 351, 383 |
| FatI | CATG | 2 cut(s) | 208, 544 |
| Fnu4HI | GCNGC | 3 cut(s) | 255, 540, 697 |
| FokI | GGATG | 1 cut(s) | 451 |
| Fsp4HI | GCNGC | 3 cut(s) | 255, 540, 697 |
| FspBI | CTAG | 2 cut(s) | 663, 700 |
| GlaI | GCGC | 1 cut(s) | 258 |
| GluI | GCNGC | 3 cut(s) | 255, 540, 697 |
| HapII | CCGG | 1 cut(s) | 594 |
| HhaI | GCGC | 1 cut(s) | 259 |
| Hin1II | CATG | 2 cut(s) | 212, 548 |
| Hin6I | GCGC | 1 cut(s) | 257 |
| HinP1I | GCGC | 1 cut(s) | 257 |
| HindIII | AAGCTT | 1 cut(s) | 360 |
| HinfI | GANTC | 5 cut(s) | 56, 100, 215, 305, 385 |
| HpaII | CCGG | 1 cut(s) | 594 |
| Hpy166II | GTNNAC | 4 cut(s) | 45, 495, 670, 691 |
| Hpy188I | TCNGA | 2 cut(s) | 72, 397 |
| Hpy8I | GTNNAC | 4 cut(s) | 45, 495, 670, 691 |
| HpyAV | CCTTC | 1 cut(s) | 165 |
| HpyCH4III | ACNGT | 2 cut(s) | 351, 499 |
| HpyCH4IV | ACGT | 2 cut(s) | 181, 339 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 38, 347, 449, 473, 495, 530, 696 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 10, 536 |
| HpyF3I | CTNAG | 1 cut(s) | 227 |
| HpySE526I | ACGT | 2 cut(s) | 181, 339 |
| Hsp92II | CATG | 2 cut(s) | 212, 548 |
| HspAI | GCGC | 1 cut(s) | 257 |
| Kzo9I | GATC | 3 cut(s) | 406, 589, 637 |
| LpnPI | CCDG | 3 cut(s) | 273, 357, 607 |
| Lsp1109I | GCAGC | 2 cut(s) | 241, 526 |
| LweI | GCATC | 2 cut(s) | 25, 436 |
| MaeI | CTAG | 2 cut(s) | 663, 700 |
| MaeII | ACGT | 2 cut(s) | 181, 339 |
| MaeIII | GTNAC | 1 cut(s) | 460 |
| MalI | GATC | 3 cut(s) | 408, 591, 639 |
| MboI | GATC | 3 cut(s) | 406, 589, 637 |
| MboII | GAAGA | 3 cut(s) | 92, 249, 532 |
| MfeI | CAATTG | 1 cut(s) | 243 |
| MflI | RGATCY | 1 cut(s) | 589 |
| MhlI | GDGCHC | 1 cut(s) | 497 |
| MlyI | GAGTC | 1 cut(s) | 314 |
| MmeI | TCCRAC | 1 cut(s) | 50 |
| MnlI | CCTC | 5 cut(s) | 141, 262, 268, 381, 585 |
| MseI | TTAA | 4 cut(s) | 96, 116, 135, 453 |
| MspI | CCGG | 1 cut(s) | 594 |
| MspR9I | CCNGG | 1 cut(s) | 594 |
| MunI | CAATTG | 1 cut(s) | 243 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 10, 536 |
| NciI | CCSGG | 1 cut(s) | 594 |
| NdeII | GATC | 3 cut(s) | 406, 589, 637 |
| NlaIII | CATG | 2 cut(s) | 212, 548 |
| NlaIV | GGNNCC | 1 cut(s) | 279 |
| NmuCI | GTSAC | 1 cut(s) | 460 |
| NspI | RCATGY | 1 cut(s) | 212 |
| PaeI | GCATGC | 1 cut(s) | 212 |
| PfeI | GAWTC | 4 cut(s) | 56, 100, 215, 385 |
| PkrI | GCNGC | 3 cut(s) | 256, 541, 698 |
| PleI | GAGTC | 1 cut(s) | 313 |
| PpsI | GAGTC | 1 cut(s) | 313 |
| Ppu21I | YACGTR | 1 cut(s) | 340 |
| PspN4I | GGNNCC | 1 cut(s) | 279 |
| PstI | CTGCAG | 1 cut(s) | 698 |
| PsuI | RGATCY | 1 cut(s) | 589 |
| RsaI | GTAC | 2 cut(s) | 558, 692 |
| RsaNI | GTAC | 2 cut(s) | 557, 691 |
| SaqAI | TTAA | 4 cut(s) | 96, 116, 135, 453 |
| SatI | GCNGC | 3 cut(s) | 255, 540, 697 |
| Sau3AI | GATC | 3 cut(s) | 406, 589, 637 |
| ScaI | AGTACT | 1 cut(s) | 558 |
| SchI | GAGTC | 1 cut(s) | 314 |
| ScrFI | CCNGG | 1 cut(s) | 594 |
| SduI | GDGCHC | 1 cut(s) | 497 |
| SetI | ASST | 8 cut(s) | 32, 152, 184, 273, 342, 364, 541, 701 |
| SfaNI | GCATC | 2 cut(s) | 25, 436 |
| SfcI | CTRYAG | 1 cut(s) | 694 |
| SphI | GCATGC | 1 cut(s) | 212 |
| SspMI | CTAG | 2 cut(s) | 663, 700 |
| StyD4I | CCNGG | 1 cut(s) | 592 |
| TaaI | ACNGT | 2 cut(s) | 351, 499 |
| TaiI | ACGT | 2 cut(s) | 184, 342 |
| TatI | WGTACW | 2 cut(s) | 556, 690 |
| TfiI | GAWTC | 4 cut(s) | 56, 100, 215, 385 |
| Tru1I | TTAA | 4 cut(s) | 96, 116, 135, 453 |
| Tru9I | TTAA | 4 cut(s) | 96, 116, 135, 453 |
| TscAI | CASTG | 1 cut(s) | 502 |
| TseFI | GTSAC | 1 cut(s) | 460 |
| TseI | GCWGC | 3 cut(s) | 254, 539, 696 |
| Tsp45I | GTSAC | 1 cut(s) | 460 |
| TspDTI | ATGAA | 3 cut(s) | 153, 309, 333 |
| TspRI | CASTG | 1 cut(s) | 502 |
| VneI | GTGCAC | 1 cut(s) | 493 |
| XapI | RAATTY | 6 cut(s) | 105, 296, 391, 399, 476, 570 |
| XceI | RCATGY | 1 cut(s) | 212 |
| XspI | CTAG | 2 cut(s) | 663, 700 |
| ZrmI | AGTACT | 1 cut(s) | 558 |