transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 145 |
| Acc36I | ACCTGC | 1 cut(s) | 145 |
| AccB1I | GGYRCC | 2 cut(s) | 183, 505 |
| AccI | GTMKAC | 1 cut(s) | 545 |
| AciI | CCGC | 2 cut(s) | 187, 461 |
| AclWI | GGATC | 1 cut(s) | 311 |
| AcuI | CTGAAG | 1 cut(s) | 549 |
| AcyI | GRCGYC | 1 cut(s) | 184 |
| AfaI | GTAC | 3 cut(s) | 5, 283, 334 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 193, 461 |
| AgsI | TTSAA | 2 cut(s) | 19, 536 |
| AleI | CACNNNNGTG | 1 cut(s) | 503 |
| AluBI | AGCT | 1 cut(s) | 513 |
| AluI | AGCT | 1 cut(s) | 513 |
| Alw26I | GTCTC | 1 cut(s) | 340 |
| AlwI | GGATC | 1 cut(s) | 311 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 326 |
| ApeKI | GCWGC | 3 cut(s) | 189, 488, 513 |
| AseI | ATTAAT | 1 cut(s) | 237 |
| AspLEI | GCGC | 1 cut(s) | 186 |
| AsuC2I | CCSGG | 1 cut(s) | 194 |
| BanI | GGYRCC | 2 cut(s) | 183, 505 |
| BbsI | GAAGAC | 1 cut(s) | 543 |
| BbvI | GCAGC | 3 cut(s) | 176, 475, 500 |
| BcnI | CCSGG | 1 cut(s) | 194 |
| BcoDI | GTCTC | 1 cut(s) | 340 |
| BfmI | CTRYAG | 3 cut(s) | 262, 365, 383 |
| BfoI | RGCGCY | 1 cut(s) | 187 |
| BfuAI | ACCTGC | 1 cut(s) | 145 |
| BisI | GCNGC | 4 cut(s) | 187, 190, 489, 514 |
| BlsI | GCNGC | 4 cut(s) | 188, 191, 490, 515 |
| Bme1390I | CCNGG | 1 cut(s) | 194 |
| BmiI | GGNNCC | 2 cut(s) | 185, 507 |
| BmrFI | CCNGG | 1 cut(s) | 194 |
| BmrI | ACTGGG | 1 cut(s) | 423 |
| BmsI | GCATC | 1 cut(s) | 589 |
| BmuI | ACTGGG | 1 cut(s) | 423 |
| BpiI | GAAGAC | 1 cut(s) | 543 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 466, 498 |
| BpuEI | CTTGAG | 1 cut(s) | 106 |
| BpuMI | CCSGG | 1 cut(s) | 194 |
| BsaBI | GATNNNNATC | 1 cut(s) | 315 |
| BsaHI | GRCGYC | 1 cut(s) | 184 |
| BsaJI | CCNNGG | 1 cut(s) | 193 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 193, 461 |
| Bse1I | ACTGG | 1 cut(s) | 418 |
| Bse8I | GATNNNNATC | 1 cut(s) | 315 |
| BseDI | CCNNGG | 1 cut(s) | 193 |
| BseGI | GGATG | 1 cut(s) | 604 |
| BseJI | GATNNNNATC | 1 cut(s) | 315 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 193, 461 |
| BseNI | ACTGG | 1 cut(s) | 418 |
| BseXI | GCAGC | 3 cut(s) | 176, 475, 500 |
| BshNI | GGYRCC | 2 cut(s) | 183, 505 |
| BsiSI | CCGG | 1 cut(s) | 193 |
| BslFI | GGGAC | 1 cut(s) | 477 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 193, 461 |
| BsmAI | GTCTC | 1 cut(s) | 340 |
| BsmFI | GGGAC | 1 cut(s) | 477 |
| Bsp143I | GATC | 2 cut(s) | 287, 316 |
| BspACI | CCGC | 2 cut(s) | 187, 461 |
| BspLI | GGNNCC | 2 cut(s) | 185, 507 |
| BspMAI | CTGCAG | 2 cut(s) | 266, 387 |
| BspMI | ACCTGC | 1 cut(s) | 145 |
| BspPI | GGATC | 1 cut(s) | 311 |
| BspT107I | GGYRCC | 2 cut(s) | 183, 505 |
| BsrI | ACTGG | 1 cut(s) | 418 |
| BssECI | CCNNGG | 1 cut(s) | 193 |
| BssMI | GATC | 2 cut(s) | 287, 316 |
| BssNI | GRCGYC | 1 cut(s) | 184 |
| Bst4CI | ACNGT | 2 cut(s) | 369, 394 |
| BstACI | GRCGYC | 1 cut(s) | 184 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 270 |
| BstDEI | CTNAG | 1 cut(s) | 350 |
| BstF5I | GGATG | 1 cut(s) | 604 |
| BstH2I | RGCGCY | 1 cut(s) | 187 |
| BstHHI | GCGC | 1 cut(s) | 186 |
| BstKTI | GATC | 2 cut(s) | 290, 319 |
| BstMAI | GTCTC | 1 cut(s) | 340 |
| BstMBI | GATC | 2 cut(s) | 287, 316 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 270, 494 |
| BstSCI | CCNGG | 1 cut(s) | 192 |
| BstSFI | CTRYAG | 3 cut(s) | 262, 365, 383 |
| BstV1I | GCAGC | 3 cut(s) | 176, 475, 500 |
| BstV2I | GAAGAC | 1 cut(s) | 543 |
| BtsCI | GGATG | 1 cut(s) | 604 |
| BtsI | GCAGTG | 1 cut(s) | 380 |
| BtsIMutI | CAGTG | 2 cut(s) | 374, 380 |
| BveI | ACCTGC | 1 cut(s) | 145 |
| CaiI | CAGNNNCTG | 1 cut(s) | 326 |
| CfoI | GCGC | 1 cut(s) | 186 |
| Csp6I | GTAC | 3 cut(s) | 4, 282, 333 |
| CviAII | CATG | 3 cut(s) | 274, 494, 593 |
| CviJI | RGCY | 3 cut(s) | 418, 488, 513 |
| CviKI_1 | RGCY | 3 cut(s) | 418, 488, 513 |
| CviQI | GTAC | 3 cut(s) | 4, 282, 333 |
| DdeI | CTNAG | 1 cut(s) | 350 |
| DinI | GGCGCC | 1 cut(s) | 185 |
| DpnI | GATC | 2 cut(s) | 289, 318 |
| DpnII | GATC | 2 cut(s) | 287, 316 |
| DraI | TTTAAA | 2 cut(s) | 51, 207 |
| Eco57I | CTGAAG | 1 cut(s) | 549 |
| EgeI | GGCGCC | 1 cut(s) | 185 |
| EheI | GGCGCC | 1 cut(s) | 185 |
| FaeI | CATG | 3 cut(s) | 277, 497, 596 |
| FaiI | YATR | 9 cut(s) | 97, 227, 275, 402, 440, 495, 567, 569, 594 |
| FaqI | GGGAC | 1 cut(s) | 477 |
| FatI | CATG | 3 cut(s) | 273, 493, 592 |
| FauI | CCCGC | 1 cut(s) | 454 |
| FauNDI | CATATG | 1 cut(s) | 567 |
| FblI | GTMKAC | 1 cut(s) | 545 |
| Fnu4HI | GCNGC | 4 cut(s) | 187, 190, 489, 514 |
| FokI | GGATG | 1 cut(s) | 611 |
| Fsp4HI | GCNGC | 4 cut(s) | 187, 190, 489, 514 |
| GlaI | GCGC | 1 cut(s) | 185 |
| GluI | GCNGC | 4 cut(s) | 187, 190, 489, 514 |
| HaeII | RGCGCY | 1 cut(s) | 187 |
| HapII | CCGG | 1 cut(s) | 193 |
| HhaI | GCGC | 1 cut(s) | 186 |
| Hin1I | GRCGYC | 1 cut(s) | 184 |
| Hin1II | CATG | 3 cut(s) | 277, 497, 596 |
| Hin6I | GCGC | 1 cut(s) | 184 |
| HinP1I | GCGC | 1 cut(s) | 184 |
| HinfI | GANTC | 5 cut(s) | 19, 88, 361, 479, 577 |
| HpaII | CCGG | 1 cut(s) | 193 |
| Hpy166II | GTNNAC | 3 cut(s) | 374, 411, 546 |
| Hpy188III | TCNNGA | 3 cut(s) | 174, 320, 527 |
| Hpy8I | GTNNAC | 3 cut(s) | 374, 411, 546 |
| HpyAV | CCTTC | 2 cut(s) | 387, 594 |
| HpyCH4III | ACNGT | 2 cut(s) | 369, 394 |
| HpyCH4IV | ACGT | 2 cut(s) | 331, 548 |
| HpyCH4V | TGCA | 8 cut(s) | 122, 264, 273, 308, 385, 400, 516, 602 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 270, 494 |
| HpyF3I | CTNAG | 1 cut(s) | 350 |
| HpySE526I | ACGT | 2 cut(s) | 331, 548 |
| Hsp92I | GRCGYC | 1 cut(s) | 184 |
| Hsp92II | CATG | 3 cut(s) | 277, 497, 596 |
| HspAI | GCGC | 1 cut(s) | 184 |
| KasI | GGCGCC | 1 cut(s) | 183 |
| Kzo9I | GATC | 2 cut(s) | 287, 316 |
| Lsp1109I | GCAGC | 3 cut(s) | 176, 475, 500 |
| LweI | GCATC | 1 cut(s) | 589 |
| MaeII | ACGT | 2 cut(s) | 331, 548 |
| MalI | GATC | 2 cut(s) | 289, 318 |
| MboI | GATC | 2 cut(s) | 287, 316 |
| MboII | GAAGA | 3 cut(s) | 234, 446, 548 |
| MluCI | AATT | 6 cut(s) | 28, 92, 178, 234, 238, 303 |
| Mly113I | GGCGCC | 1 cut(s) | 184 |
| MlyI | GAGTC | 1 cut(s) | 97 |
| MmeI | TCCRAC | 1 cut(s) | 552 |
| MnlI | CCTC | 3 cut(s) | 424, 468, 496 |
| MseI | TTAA | 4 cut(s) | 50, 141, 206, 237 |
| MslI | CAYNNNNRTG | 3 cut(s) | 503, 597, 613 |
| MspA1I | CMGCKG | 2 cut(s) | 189, 461 |
| MspI | CCGG | 1 cut(s) | 193 |
| MspR9I | CCNGG | 1 cut(s) | 194 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 270, 494 |
| NarI | GGCGCC | 1 cut(s) | 184 |
| NciI | CCSGG | 1 cut(s) | 194 |
| NdeI | CATATG | 1 cut(s) | 567 |
| NdeII | GATC | 2 cut(s) | 287, 316 |
| NlaIII | CATG | 3 cut(s) | 277, 497, 596 |
| NlaIV | GGNNCC | 2 cut(s) | 185, 507 |
| OliI | CACNNNNGTG | 1 cut(s) | 503 |
| PaqCI | CACCTGC | 1 cut(s) | 145 |
| PfeI | GAWTC | 4 cut(s) | 19, 361, 479, 577 |
| PkrI | GCNGC | 4 cut(s) | 188, 191, 490, 515 |
| PleI | GAGTC | 1 cut(s) | 96 |
| PluTI | GGCGCC | 1 cut(s) | 187 |
| PpsI | GAGTC | 1 cut(s) | 96 |
| PshBI | ATTAAT | 1 cut(s) | 237 |
| PspN4I | GGNNCC | 2 cut(s) | 185, 507 |
| PstI | CTGCAG | 2 cut(s) | 266, 387 |
| PstNI | CAGNNNCTG | 1 cut(s) | 326 |
| RsaI | GTAC | 3 cut(s) | 5, 283, 334 |
| RsaNI | GTAC | 3 cut(s) | 4, 282, 333 |
| RseI | CAYNNNNRTG | 3 cut(s) | 503, 597, 613 |
| SaqAI | TTAA | 4 cut(s) | 50, 141, 206, 237 |
| SatI | GCNGC | 4 cut(s) | 187, 190, 489, 514 |
| Sau3AI | GATC | 2 cut(s) | 287, 316 |
| SchI | GAGTC | 1 cut(s) | 97 |
| ScrFI | CCNGG | 1 cut(s) | 194 |
| SfaNI | GCATC | 1 cut(s) | 589 |
| SfcI | CTRYAG | 3 cut(s) | 262, 365, 383 |
| SfoI | GGCGCC | 1 cut(s) | 185 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 503, 597, 613 |
| SmlI | CTYRAG | 1 cut(s) | 85 |
| SmoI | CTYRAG | 1 cut(s) | 85 |
| Sse9I | AATT | 6 cut(s) | 28, 92, 178, 234, 238, 303 |
| SsiI | CCGC | 2 cut(s) | 187, 461 |
| SspDI | GGCGCC | 1 cut(s) | 183 |
| StyD4I | CCNGG | 1 cut(s) | 192 |
| TaaI | ACNGT | 2 cut(s) | 369, 394 |
| TaiI | ACGT | 2 cut(s) | 334, 551 |
| TasI | AATT | 6 cut(s) | 28, 92, 178, 234, 238, 303 |
| TatI | WGTACW | 1 cut(s) | 3 |
| TauI | GCSGC | 1 cut(s) | 189 |
| TfiI | GAWTC | 4 cut(s) | 19, 361, 479, 577 |
| Tru1I | TTAA | 4 cut(s) | 50, 141, 206, 237 |
| Tru9I | TTAA | 4 cut(s) | 50, 141, 206, 237 |
| TscAI | CASTG | 2 cut(s) | 374, 387 |
| TseI | GCWGC | 3 cut(s) | 189, 488, 513 |
| TspDTI | ATGAA | 2 cut(s) | 576, 581 |
| TspRI | CASTG | 2 cut(s) | 374, 387 |
| VspI | ATTAAT | 1 cut(s) | 237 |
| XmiI | GTMKAC | 1 cut(s) | 545 |