transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 307 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 477 |
| AccII | CGCG | 1 cut(s) | 184 |
| AclWI | GGATC | 1 cut(s) | 221 |
| AfaI | GTAC | 3 cut(s) | 10, 16, 65 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 477, 653 |
| AgsI | TTSAA | 3 cut(s) | 46, 361, 454 |
| AluBI | AGCT | 2 cut(s) | 99, 439 |
| AluI | AGCT | 2 cut(s) | 99, 439 |
| Alw26I | GTCTC | 1 cut(s) | 372 |
| AlwI | GGATC | 1 cut(s) | 221 |
| AoxI | GGCC | 1 cut(s) | 314 |
| ApeKI | GCWGC | 1 cut(s) | 467 |
| AsuHPI | GGTGA | 6 cut(s) | 117, 129, 141, 185, 231, 626 |
| BaeGI | GKGCMC | 1 cut(s) | 310 |
| BanI | GGYRCC | 1 cut(s) | 307 |
| BbsI | GAAGAC | 2 cut(s) | 399, 580 |
| BbvI | GCAGC | 1 cut(s) | 454 |
| BccI | CCATC | 2 cut(s) | 88, 602 |
| BciVI | GTATCC | 1 cut(s) | 522 |
| BclI | TGATCA | 1 cut(s) | 616 |
| BcoDI | GTCTC | 1 cut(s) | 372 |
| BfaI | CTAG | 2 cut(s) | 374, 440 |
| BfuI | GTATCC | 1 cut(s) | 522 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 335 |
| BisI | GCNGC | 1 cut(s) | 468 |
| BlsI | GCNGC | 1 cut(s) | 469 |
| BmcAI | AGTACT | 1 cut(s) | 10 |
| BmiI | GGNNCC | 2 cut(s) | 78, 309 |
| BmsI | GCATC | 1 cut(s) | 249 |
| BpiI | GAAGAC | 2 cut(s) | 399, 580 |
| BpuEI | CTTGAG | 2 cut(s) | 92, 231 |
| BsaBI | GATNNNNATC | 1 cut(s) | 225 |
| BsaJI | CCNNGG | 1 cut(s) | 311 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 477, 653 |
| Bse1I | ACTGG | 2 cut(s) | 6, 16 |
| Bse8I | GATNNNNATC | 1 cut(s) | 225 |
| BseDI | CCNNGG | 1 cut(s) | 311 |
| BseGI | GGATG | 3 cut(s) | 91, 264, 613 |
| BseJI | GATNNNNATC | 1 cut(s) | 225 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 477, 653 |
| BseMII | CTCAG | 1 cut(s) | 195 |
| BseNI | ACTGG | 2 cut(s) | 6, 16 |
| BseSI | GKGCMC | 1 cut(s) | 310 |
| BseXI | GCAGC | 1 cut(s) | 454 |
| Bsh1236I | CGCG | 1 cut(s) | 184 |
| BshFI | GGCC | 1 cut(s) | 316 |
| BshNI | GGYRCC | 1 cut(s) | 307 |
| BsiSI | CCGG | 1 cut(s) | 335 |
| BslFI | GGGAC | 1 cut(s) | 579 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 477, 653 |
| BsmAI | GTCTC | 1 cut(s) | 372 |
| BsmBI | CGTCTC | 1 cut(s) | 372 |
| BsmFI | GGGAC | 1 cut(s) | 579 |
| BsnI | GGCC | 1 cut(s) | 316 |
| Bsp1286I | GDGCHC | 1 cut(s) | 310 |
| Bsp143I | GATC | 5 cut(s) | 67, 226, 432, 616, 649 |
| BspANI | GGCC | 1 cut(s) | 316 |
| BspCNI | CTCAG | 1 cut(s) | 196 |
| BspFNI | CGCG | 1 cut(s) | 184 |
| BspLI | GGNNCC | 2 cut(s) | 78, 309 |
| BspPI | GGATC | 1 cut(s) | 221 |
| BspQI | GCTCTTC | 1 cut(s) | 351 |
| BspT107I | GGYRCC | 1 cut(s) | 307 |
| BsrI | ACTGG | 2 cut(s) | 6, 16 |
| BssECI | CCNNGG | 1 cut(s) | 311 |
| BssMI | GATC | 5 cut(s) | 67, 226, 432, 616, 649 |
| BssT1I | CCWWGG | 1 cut(s) | 311 |
| Bst6I | CTCTTC | 4 cut(s) | 54, 270, 351, 449 |
| BstDEI | CTNAG | 3 cut(s) | 204, 269, 513 |
| BstF5I | GGATG | 3 cut(s) | 91, 264, 613 |
| BstFNI | CGCG | 1 cut(s) | 184 |
| BstKTI | GATC | 5 cut(s) | 70, 229, 435, 619, 652 |
| BstMAI | GTCTC | 1 cut(s) | 372 |
| BstMBI | GATC | 5 cut(s) | 67, 226, 432, 616, 649 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 335 |
| BstSLI | GKGCMC | 1 cut(s) | 310 |
| BstUI | CGCG | 1 cut(s) | 184 |
| BstV1I | GCAGC | 1 cut(s) | 454 |
| BstV2I | GAAGAC | 2 cut(s) | 399, 580 |
| BsuI | GTATCC | 1 cut(s) | 522 |
| BsuRI | GGCC | 1 cut(s) | 316 |
| BtgZI | GCGATG | 1 cut(s) | 310 |
| BtsCI | GGATG | 3 cut(s) | 91, 264, 613 |
| Csp6I | GTAC | 3 cut(s) | 9, 15, 64 |
| CviAII | CATG | 1 cut(s) | 18 |
| CviJI | RGCY | 6 cut(s) | 99, 316, 338, 439, 467, 507 |
| CviKI_1 | RGCY | 6 cut(s) | 99, 316, 338, 439, 467, 507 |
| CviQI | GTAC | 3 cut(s) | 9, 15, 64 |
| DdeI | CTNAG | 3 cut(s) | 204, 269, 513 |
| DpnI | GATC | 5 cut(s) | 69, 228, 434, 618, 651 |
| DpnII | GATC | 5 cut(s) | 67, 226, 432, 616, 649 |
| Eam1104I | CTCTTC | 4 cut(s) | 54, 270, 351, 449 |
| EarI | CTCTTC | 4 cut(s) | 54, 270, 351, 449 |
| Eco130I | CCWWGG | 1 cut(s) | 311 |
| EcoT14I | CCWWGG | 1 cut(s) | 311 |
| ErhI | CCWWGG | 1 cut(s) | 311 |
| Esp3I | CGTCTC | 1 cut(s) | 372 |
| FaeI | CATG | 1 cut(s) | 21 |
| FaiI | YATR | 5 cut(s) | 19, 366, 473, 525, 644 |
| FaqI | GGGAC | 1 cut(s) | 579 |
| FatI | CATG | 1 cut(s) | 17 |
| FbaI | TGATCA | 1 cut(s) | 616 |
| Fnu4HI | GCNGC | 1 cut(s) | 468 |
| FokI | GGATG | 3 cut(s) | 78, 271, 620 |
| Fsp4HI | GCNGC | 1 cut(s) | 468 |
| FspBI | CTAG | 2 cut(s) | 374, 440 |
| GluI | GCNGC | 1 cut(s) | 468 |
| HaeIII | GGCC | 1 cut(s) | 316 |
| HapII | CCGG | 1 cut(s) | 335 |
| Hin1II | CATG | 1 cut(s) | 21 |
| HincII | GTYRAC | 1 cut(s) | 445 |
| HindII | GTYRAC | 1 cut(s) | 445 |
| HinfI | GANTC | 2 cut(s) | 176, 199 |
| HpaII | CCGG | 1 cut(s) | 335 |
| HphI | GGTGA | 6 cut(s) | 117, 129, 141, 185, 231, 626 |
| Hpy166II | GTNNAC | 4 cut(s) | 125, 149, 193, 445 |
| Hpy188I | TCNGA | 2 cut(s) | 96, 588 |
| Hpy188III | TCNNGA | 3 cut(s) | 71, 203, 248 |
| Hpy8I | GTNNAC | 4 cut(s) | 125, 149, 193, 445 |
| HpyAV | CCTTC | 2 cut(s) | 162, 598 |
| HpyCH4IV | ACGT | 1 cut(s) | 447 |
| HpyCH4V | TGCA | 2 cut(s) | 212, 580 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 335 |
| HpyF3I | CTNAG | 3 cut(s) | 204, 269, 513 |
| HpySE526I | ACGT | 1 cut(s) | 447 |
| Hsp92II | CATG | 1 cut(s) | 21 |
| Ksp22I | TGATCA | 1 cut(s) | 616 |
| Kzo9I | GATC | 5 cut(s) | 67, 226, 432, 616, 649 |
| LguI | GCTCTTC | 1 cut(s) | 351 |
| LpnPI | CCDG | 4 cut(s) | 19, 209, 216, 348 |
| Lsp1109I | GCAGC | 1 cut(s) | 454 |
| LweI | GCATC | 1 cut(s) | 249 |
| MaeI | CTAG | 2 cut(s) | 374, 440 |
| MaeII | ACGT | 1 cut(s) | 447 |
| MalI | GATC | 5 cut(s) | 69, 228, 434, 618, 651 |
| MboI | GATC | 5 cut(s) | 67, 226, 432, 616, 649 |
| MhlI | GDGCHC | 1 cut(s) | 310 |
| MluCI | AATT | 2 cut(s) | 108, 159 |
| MmeI | TCCRAC | 2 cut(s) | 34, 458 |
| MnlI | CCTC | 8 cut(s) | 67, 274, 376, 450, 532, 556, 594, 605 |
| MseI | TTAA | 1 cut(s) | 158 |
| MspI | CCGG | 1 cut(s) | 335 |
| MvnI | CGCG | 1 cut(s) | 184 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 335 |
| NdeII | GATC | 5 cut(s) | 67, 226, 432, 616, 649 |
| NlaIII | CATG | 1 cut(s) | 21 |
| NlaIV | GGNNCC | 2 cut(s) | 78, 309 |
| PciSI | GCTCTTC | 1 cut(s) | 351 |
| PfeI | GAWTC | 2 cut(s) | 176, 199 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 477 |
| PkrI | GCNGC | 1 cut(s) | 469 |
| PspN4I | GGNNCC | 2 cut(s) | 78, 309 |
| RsaI | GTAC | 3 cut(s) | 10, 16, 65 |
| RsaNI | GTAC | 3 cut(s) | 9, 15, 64 |
| SapI | GCTCTTC | 1 cut(s) | 351 |
| SaqAI | TTAA | 1 cut(s) | 158 |
| SatI | GCNGC | 1 cut(s) | 468 |
| Sau3AI | GATC | 5 cut(s) | 67, 226, 432, 616, 649 |
| ScaI | AGTACT | 1 cut(s) | 10 |
| SduI | GDGCHC | 1 cut(s) | 310 |
| SetI | ASST | 8 cut(s) | 78, 101, 154, 441, 450, 478, 586, 616 |
| SfaNI | GCATC | 1 cut(s) | 249 |
| SmlI | CTYRAG | 2 cut(s) | 71, 246 |
| SmoI | CTYRAG | 2 cut(s) | 71, 246 |
| Sse9I | AATT | 2 cut(s) | 108, 159 |
| SspMI | CTAG | 2 cut(s) | 374, 440 |
| StyI | CCWWGG | 1 cut(s) | 311 |
| TaiI | ACGT | 1 cut(s) | 450 |
| TasI | AATT | 2 cut(s) | 108, 159 |
| TatI | WGTACW | 1 cut(s) | 8 |
| TfiI | GAWTC | 2 cut(s) | 176, 199 |
| Tru1I | TTAA | 1 cut(s) | 158 |
| Tru9I | TTAA | 1 cut(s) | 158 |
| TseI | GCWGC | 1 cut(s) | 467 |
| TspDTI | ATGAA | 4 cut(s) | 102, 399, 512, 608 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 477 |
| XspI | CTAG | 2 cut(s) | 374, 440 |
| ZrmI | AGTACT | 1 cut(s) | 10 |