strictosidine synthase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RT_RNaseH | PF17917 | 2 - 76 | 3e-27 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH_2 | PF17919 | 2 - 46 | 4e-13 | RNase H-like domain found in reverse transcriptase |
| Integrase_H2C2 | PF17921 | 181 - 238 | 2e-12 | Integrase zinc binding domain |
| rve | PF00665 | 260 - 352 | 7.2e-17 | Integrase core domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 427 |
| AciI | CCGC | 6 cut(s) | 272, 621, 842, 1055, 1179, 1307 |
| AclWI | GGATC | 1 cut(s) | 625 |
| AcsI | RAATTY | 6 cut(s) | 911, 1077, 1101, 1288, 1322, 1561 |
| AfaI | GTAC | 4 cut(s) | 313, 830, 1177, 1372 |
| AflIII | ACRYGT | 1 cut(s) | 852 |
| AgsI | TTSAA | 9 cut(s) | 34, 160, 628, 667, 816, 1012, 1076, 1585, 1672 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 280 |
| AjnI | CCWGG | 1 cut(s) | 918 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 59, 91 |
| AleI | CACNNNNGTG | 1 cut(s) | 591 |
| AluBI | AGCT | 5 cut(s) | 41, 373, 1125, 1252, 1471 |
| AluI | AGCT | 5 cut(s) | 41, 373, 1125, 1252, 1471 |
| Alw21I | GWGCWC | 4 cut(s) | 141, 927, 1145, 1455 |
| Alw26I | GTCTC | 1 cut(s) | 726 |
| Alw44I | GTGCAC | 1 cut(s) | 137 |
| AlwI | GGATC | 1 cut(s) | 625 |
| Aor13HI | TCCGGA | 1 cut(s) | 427 |
| AoxI | GGCC | 2 cut(s) | 653, 800 |
| ApaLI | GTGCAC | 1 cut(s) | 137 |
| ApoI | RAATTY | 6 cut(s) | 911, 1077, 1101, 1288, 1322, 1561 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1610, 1642 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 102 |
| AspLEI | GCGC | 1 cut(s) | 874 |
| AspS9I | GGNCC | 7 cut(s) | 145, 274, 654, 800, 885, 1511, 1618 |
| AsuC2I | CCSGG | 1 cut(s) | 1485 |
| AsuHPI | GGTGA | 4 cut(s) | 715, 1105, 1129, 1322 |
| AvaII | GGWCC | 5 cut(s) | 145, 274, 885, 1511, 1618 |
| BaeGI | GKGCMC | 1 cut(s) | 141 |
| BbsI | GAAGAC | 3 cut(s) | 623, 1118, 1397 |
| Bbv12I | GWGCWC | 4 cut(s) | 141, 927, 1145, 1455 |
| BccI | CCATC | 4 cut(s) | 17, 198, 290, 962 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 863, 897 |
| BciT130I | CCWGG | 1 cut(s) | 920 |
| BcnI | CCSGG | 1 cut(s) | 1485 |
| BcoDI | GTCTC | 1 cut(s) | 726 |
| BfaI | CTAG | 4 cut(s) | 729, 936, 1106, 1298 |
| BglII | AGATCT | 2 cut(s) | 1428, 1496 |
| Bme1390I | CCNGG | 2 cut(s) | 920, 1485 |
| Bme18I | GGWCC | 5 cut(s) | 145, 274, 885, 1511, 1618 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 280 |
| BmgT120I | GGNCC | 7 cut(s) | 145, 274, 654, 800, 885, 1511, 1618 |
| BmiI | GGNNCC | 3 cut(s) | 801, 976, 1546 |
| BmrFI | CCNGG | 2 cut(s) | 920, 1485 |
| BmsI | GCATC | 4 cut(s) | 460, 883, 1147, 1606 |
| BpiI | GAAGAC | 3 cut(s) | 623, 1118, 1397 |
| BpmI | CTGGAG | 1 cut(s) | 902 |
| Bpu10I | CCTNAGC | 1 cut(s) | 897 |
| BpuEI | CTTGAG | 4 cut(s) | 27, 590, 1111, 1274 |
| BpuMI | CCSGG | 1 cut(s) | 1485 |
| Bsa29I | ATCGAT | 1 cut(s) | 700 |
| BsaAI | YACGTR | 1 cut(s) | 853 |
| BsaI | GGTCTC | 1 cut(s) | 726 |
| BsaJI | CCNNGG | 1 cut(s) | 377 |
| BsaWI | WCCGGW | 1 cut(s) | 427 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1536, 1566 |
| Bse118I | RCCGGY | 2 cut(s) | 251, 641 |
| BseAI | TCCGGA | 1 cut(s) | 427 |
| BseBI | CCWGG | 1 cut(s) | 920 |
| BseCI | ATCGAT | 1 cut(s) | 700 |
| BseDI | CCNNGG | 1 cut(s) | 377 |
| BseGI | GGATG | 1 cut(s) | 496 |
| BseRI | GAGGAG | 1 cut(s) | 469 |
| BseSI | GKGCMC | 1 cut(s) | 141 |
| BshFI | GGCC | 2 cut(s) | 655, 802 |
| BshVI | ATCGAT | 1 cut(s) | 700 |
| BsiHKAI | GWGCWC | 4 cut(s) | 141, 927, 1145, 1455 |
| BsiSI | CCGG | 4 cut(s) | 252, 428, 642, 1485 |
| BslFI | GGGAC | 2 cut(s) | 430, 452 |
| BsmAI | GTCTC | 1 cut(s) | 726 |
| BsmFI | GGGAC | 2 cut(s) | 430, 452 |
| BsnI | GGCC | 2 cut(s) | 655, 802 |
| Bso31I | GGTCTC | 1 cut(s) | 726 |
| Bsp1286I | GDGCHC | 4 cut(s) | 141, 927, 1145, 1455 |
| Bsp13I | TCCGGA | 1 cut(s) | 427 |
| Bsp143I | GATC | 6 cut(s) | 630, 697, 1294, 1327, 1428, 1496 |
| Bsp19I | CCATGG | 1 cut(s) | 377 |
| BspACI | CCGC | 6 cut(s) | 272, 621, 842, 1055, 1179, 1307 |
| BspANI | GGCC | 2 cut(s) | 655, 802 |
| BspDI | ATCGAT | 1 cut(s) | 700 |
| BspEI | TCCGGA | 1 cut(s) | 427 |
| BspHI | TCATGA | 3 cut(s) | 241, 676, 1153 |
| BspLI | GGNNCC | 3 cut(s) | 801, 976, 1546 |
| BspPI | GGATC | 1 cut(s) | 625 |
| BspTNI | GGTCTC | 1 cut(s) | 726 |
| BsrFI | RCCGGY | 2 cut(s) | 251, 641 |
| BssAI | RCCGGY | 2 cut(s) | 251, 641 |
| BssECI | CCNNGG | 1 cut(s) | 377 |
| BssMI | GATC | 6 cut(s) | 630, 697, 1294, 1327, 1428, 1496 |
| BssT1I | CCWWGG | 1 cut(s) | 377 |
| Bst2UI | CCWGG | 1 cut(s) | 920 |
| Bst4CI | ACNGT | 4 cut(s) | 358, 1117, 1175, 1515 |
| Bst6I | CTCTTC | 1 cut(s) | 460 |
| BstBAI | YACGTR | 1 cut(s) | 853 |
| BstC8I | GCNNGC | 4 cut(s) | 6, 643, 876, 1234 |
| BstDEI | CTNAG | 3 cut(s) | 169, 897, 1467 |
| BstDSI | CCRYGG | 1 cut(s) | 377 |
| BstF5I | GGATG | 1 cut(s) | 496 |
| BstHHI | GCGC | 1 cut(s) | 874 |
| BstKTI | GATC | 6 cut(s) | 633, 700, 1297, 1330, 1431, 1499 |
| BstMAI | GTCTC | 1 cut(s) | 726 |
| BstMBI | GATC | 6 cut(s) | 630, 697, 1294, 1327, 1428, 1496 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1166, 1271 |
| BstNI | CCWGG | 1 cut(s) | 920 |
| BstNSI | RCATGY | 2 cut(s) | 8, 477 |
| BstSCI | CCNGG | 2 cut(s) | 918, 1483 |
| BstSLI | GKGCMC | 1 cut(s) | 141 |
| BstV2I | GAAGAC | 3 cut(s) | 623, 1118, 1397 |
| BstX2I | RGATCY | 3 cut(s) | 630, 1428, 1496 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 593 |
| BstYI | RGATCY | 3 cut(s) | 630, 1428, 1496 |
| Bsu15I | ATCGAT | 1 cut(s) | 700 |
| BsuRI | GGCC | 2 cut(s) | 655, 802 |
| BsuTUI | ATCGAT | 1 cut(s) | 700 |
| BtgI | CCRYGG | 1 cut(s) | 377 |
| BtgZI | GCGATG | 1 cut(s) | 1583 |
| BtsCI | GGATG | 1 cut(s) | 496 |
| Cac8I | GCNNGC | 4 cut(s) | 6, 643, 876, 1234 |
| CciI | TCATGA | 3 cut(s) | 241, 676, 1153 |
| CfoI | GCGC | 1 cut(s) | 874 |
| Cfr10I | RCCGGY | 2 cut(s) | 251, 641 |
| Cfr13I | GGNCC | 7 cut(s) | 145, 274, 654, 800, 885, 1511, 1618 |
| ClaI | ATCGAT | 1 cut(s) | 700 |
| Csp6I | GTAC | 4 cut(s) | 312, 829, 1176, 1371 |
| CviQI | GTAC | 4 cut(s) | 312, 829, 1176, 1371 |
| DdeI | CTNAG | 3 cut(s) | 169, 897, 1467 |
| DpnI | GATC | 6 cut(s) | 632, 699, 1296, 1329, 1430, 1498 |
| DpnII | GATC | 6 cut(s) | 630, 697, 1294, 1327, 1428, 1496 |
| DriI | GACNNNNNGTC | 1 cut(s) | 280 |
| Eam1104I | CTCTTC | 1 cut(s) | 460 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 280 |
| EarI | CTCTTC | 1 cut(s) | 460 |
| Eco130I | CCWWGG | 1 cut(s) | 377 |
| Eco31I | GGTCTC | 1 cut(s) | 726 |
| Eco47I | GGWCC | 5 cut(s) | 145, 274, 885, 1511, 1618 |
| EcoRI | GAATTC | 1 cut(s) | 1101 |
| EcoRII | CCWGG | 1 cut(s) | 918 |
| EcoT14I | CCWWGG | 1 cut(s) | 377 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 475 |
| ErhI | CCWWGG | 1 cut(s) | 377 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 152, 184, 1345, 1377 |
| FaqI | GGGAC | 2 cut(s) | 430, 452 |
| FauI | CCCGC | 2 cut(s) | 1062, 1300 |
| FokI | GGATG | 1 cut(s) | 503 |
| FspBI | CTAG | 4 cut(s) | 729, 936, 1106, 1298 |
| GlaI | GCGC | 1 cut(s) | 873 |
| GsuI | CTGGAG | 1 cut(s) | 902 |
| HaeIII | GGCC | 2 cut(s) | 655, 802 |
| HapII | CCGG | 4 cut(s) | 252, 428, 642, 1485 |
| HhaI | GCGC | 1 cut(s) | 874 |
| Hin6I | GCGC | 1 cut(s) | 872 |
| HinP1I | GCGC | 1 cut(s) | 872 |
| HincII | GTYRAC | 1 cut(s) | 707 |
| HindII | GTYRAC | 1 cut(s) | 707 |
| HindIII | AAGCTT | 1 cut(s) | 1469 |
| HinfI | GANTC | 6 cut(s) | 182, 238, 329, 671, 720, 1204 |
| HpaII | CCGG | 4 cut(s) | 252, 428, 642, 1485 |
| HphI | GGTGA | 4 cut(s) | 715, 1105, 1129, 1322 |
| Hpy166II | GTNNAC | 6 cut(s) | 139, 388, 599, 707, 1120, 1511 |
| Hpy188I | TCNGA | 3 cut(s) | 108, 885, 1214 |
| Hpy8I | GTNNAC | 6 cut(s) | 139, 388, 599, 707, 1120, 1511 |
| HpyAV | CCTTC | 4 cut(s) | 1090, 1126, 1222, 1347 |
| HpyCH4III | ACNGT | 4 cut(s) | 358, 1117, 1175, 1515 |
| HpyCH4IV | ACGT | 1 cut(s) | 852 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 20, 92, 139, 473, 1648 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1166, 1271 |
| HpyF3I | CTNAG | 3 cut(s) | 169, 897, 1467 |
| HpySE526I | ACGT | 1 cut(s) | 852 |
| HspAI | GCGC | 1 cut(s) | 872 |
| Kpn2I | TCCGGA | 1 cut(s) | 427 |
| KroI | GCCGGC | 1 cut(s) | 641 |
| KroNI | GCCGGC | 1 cut(s) | 643 |
| Kzo9I | GATC | 6 cut(s) | 630, 697, 1294, 1327, 1428, 1496 |
| LmnI | GCTCC | 5 cut(s) | 370, 922, 1140, 1458, 1544 |
| LpnPI | CCDG | 7 cut(s) | 265, 351, 441, 655, 905, 932, 1498 |
| LweI | GCATC | 4 cut(s) | 460, 883, 1147, 1606 |
| MaeI | CTAG | 4 cut(s) | 729, 936, 1106, 1298 |
| MaeII | ACGT | 1 cut(s) | 852 |
| MaeIII | GTNAC | 2 cut(s) | 358, 1399 |
| MalI | GATC | 6 cut(s) | 632, 699, 1296, 1329, 1430, 1498 |
| MboI | GATC | 6 cut(s) | 630, 697, 1294, 1327, 1428, 1496 |
| MboII | GAAGA | 7 cut(s) | 477, 546, 628, 1024, 1123, 1402, 1438 |
| MflI | RGATCY | 3 cut(s) | 630, 1428, 1496 |
| MhlI | GDGCHC | 4 cut(s) | 141, 927, 1145, 1455 |
| MlyI | GAGTC | 2 cut(s) | 176, 1198 |
| MmeI | TCCRAC | 3 cut(s) | 1237, 1320, 1484 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 475 |
| MroI | TCCGGA | 1 cut(s) | 427 |
| MroNI | GCCGGC | 1 cut(s) | 641 |
| MroXI | GAANNNNTTC | 1 cut(s) | 102 |
| MseI | TTAA | 4 cut(s) | 1026, 1286, 1383, 1493 |
| MslI | CAYNNNNRTG | 4 cut(s) | 591, 606, 681, 761 |
| MspI | CCGG | 4 cut(s) | 252, 428, 642, 1485 |
| MspR9I | CCNGG | 2 cut(s) | 920, 1485 |
| MvaI | CCWGG | 1 cut(s) | 920 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1166, 1271 |
| NaeI | GCCGGC | 1 cut(s) | 643 |
| NciI | CCSGG | 1 cut(s) | 1485 |
| NcoI | CCATGG | 1 cut(s) | 377 |
| NdeII | GATC | 6 cut(s) | 630, 697, 1294, 1327, 1428, 1496 |
| NgoMIV | GCCGGC | 1 cut(s) | 641 |
| NlaIV | GGNNCC | 3 cut(s) | 801, 976, 1546 |
| NmeAIII | GCCGAG | 1 cut(s) | 131 |
| NsiI | ATGCAT | 2 cut(s) | 6, 475 |
| NspI | RCATGY | 2 cut(s) | 8, 477 |
| OliI | CACNNNNGTG | 1 cut(s) | 591 |
| PaeI | GCATGC | 1 cut(s) | 8 |
| PagI | TCATGA | 3 cut(s) | 241, 676, 1153 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 706 |
| PdiI | GCCGGC | 1 cut(s) | 643 |
| PdmI | GAANNNNTTC | 1 cut(s) | 102 |
| PfeI | GAWTC | 4 cut(s) | 238, 329, 671, 720 |
| PfoI | TCCNGGA | 2 cut(s) | 918, 1483 |
| PleI | GAGTC | 2 cut(s) | 176, 1198 |
| PpsI | GAGTC | 2 cut(s) | 176, 1198 |
| Ppu21I | YACGTR | 1 cut(s) | 853 |
| Psp6I | CCWGG | 1 cut(s) | 918 |
| PspGI | CCWGG | 1 cut(s) | 918 |
| PspN4I | GGNNCC | 3 cut(s) | 801, 976, 1546 |
| PspPI | GGNCC | 7 cut(s) | 145, 274, 654, 800, 885, 1511, 1618 |
| PsuI | RGATCY | 3 cut(s) | 630, 1428, 1496 |
| RsaI | GTAC | 4 cut(s) | 313, 830, 1177, 1372 |
| RsaNI | GTAC | 4 cut(s) | 312, 829, 1176, 1371 |
| RseI | CAYNNNNRTG | 4 cut(s) | 591, 606, 681, 761 |
| SaqAI | TTAA | 4 cut(s) | 1026, 1286, 1383, 1493 |
| Sau3AI | GATC | 6 cut(s) | 630, 697, 1294, 1327, 1428, 1496 |
| Sau96I | GGNCC | 7 cut(s) | 145, 274, 654, 800, 885, 1511, 1618 |
| SchI | GAGTC | 2 cut(s) | 176, 1198 |
| ScrFI | CCNGG | 2 cut(s) | 920, 1485 |
| SduI | GDGCHC | 4 cut(s) | 141, 927, 1145, 1455 |
| SfaNI | GCATC | 4 cut(s) | 460, 883, 1147, 1606 |
| SinI | GGWCC | 5 cut(s) | 145, 274, 885, 1511, 1618 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 591, 606, 681, 761 |
| SmlI | CTYRAG | 4 cut(s) | 42, 569, 1126, 1253 |
| SmoI | CTYRAG | 4 cut(s) | 42, 569, 1126, 1253 |
| SphI | GCATGC | 1 cut(s) | 8 |
| SsiI | CCGC | 6 cut(s) | 272, 621, 842, 1055, 1179, 1307 |
| SspI | AATATT | 1 cut(s) | 565 |
| SspMI | CTAG | 4 cut(s) | 729, 936, 1106, 1298 |
| StyD4I | CCNGG | 2 cut(s) | 918, 1483 |
| StyI | CCWWGG | 1 cut(s) | 377 |
| TaaI | ACNGT | 4 cut(s) | 358, 1117, 1175, 1515 |
| TaiI | ACGT | 1 cut(s) | 855 |
| TaqI | TCGA | 1 cut(s) | 700 |
| TatI | WGTACW | 2 cut(s) | 311, 828 |
| TfiI | GAWTC | 4 cut(s) | 238, 329, 671, 720 |
| Tru1I | TTAA | 4 cut(s) | 1026, 1286, 1383, 1493 |
| Tru9I | TTAA | 4 cut(s) | 1026, 1286, 1383, 1493 |
| TspDTI | ATGAA | 7 cut(s) | 51, 230, 321, 946, 1142, 1463, 1533 |
| TspGWI | ACGGA | 2 cut(s) | 77, 158 |
| VneI | GTGCAC | 1 cut(s) | 137 |
| VpaK11BI | GGWCC | 5 cut(s) | 145, 274, 885, 1511, 1618 |
| XapI | RAATTY | 6 cut(s) | 911, 1077, 1101, 1288, 1322, 1561 |
| XbaI | TCTAGA | 3 cut(s) | 728, 1105, 1297 |
| XceI | RCATGY | 2 cut(s) | 8, 477 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 593 |
| XmnI | GAANNNNTTC | 1 cut(s) | 102 |
| XspI | CTAG | 4 cut(s) | 729, 936, 1106, 1298 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 475 |