transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 12, 167, 216 |
| AcsI | RAATTY | 2 cut(s) | 27, 265 |
| AcuI | CTGAAG | 1 cut(s) | 348 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 260 |
| AgsI | TTSAA | 6 cut(s) | 118, 223, 296, 311, 375, 407 |
| AhlI | ACTAGT | 1 cut(s) | 416 |
| AjnI | CCWGG | 1 cut(s) | 196 |
| AluBI | AGCT | 4 cut(s) | 38, 362, 410, 431 |
| AluI | AGCT | 4 cut(s) | 38, 362, 410, 431 |
| AlwI | GGATC | 3 cut(s) | 12, 167, 216 |
| AoxI | GGCC | 1 cut(s) | 284 |
| ApoI | RAATTY | 2 cut(s) | 27, 265 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 386, 418 |
| AspS9I | GGNCC | 5 cut(s) | 152, 284, 314, 323, 339 |
| AsuHPI | GGTGA | 1 cut(s) | 203 |
| AvaII | GGWCC | 4 cut(s) | 152, 314, 323, 339 |
| BccI | CCATC | 3 cut(s) | 99, 195, 295 |
| BciT130I | CCWGG | 1 cut(s) | 198 |
| BclI | TGATCA | 1 cut(s) | 73 |
| BcuI | ACTAGT | 1 cut(s) | 416 |
| BfaI | CTAG | 1 cut(s) | 417 |
| Bme1390I | CCNGG | 1 cut(s) | 198 |
| Bme18I | GGWCC | 4 cut(s) | 152, 314, 323, 339 |
| BmgT120I | GGNCC | 5 cut(s) | 152, 284, 314, 323, 339 |
| BmiI | GGNNCC | 1 cut(s) | 153 |
| BmrFI | CCNGG | 1 cut(s) | 198 |
| BpuEI | CTTGAG | 3 cut(s) | 264, 303, 411 |
| BsaBI | GATNNNNATC | 1 cut(s) | 109 |
| BsaJI | CCNNGG | 3 cut(s) | 21, 136, 256 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 260 |
| Bse8I | GATNNNNATC | 1 cut(s) | 109 |
| BseBI | CCWGG | 1 cut(s) | 198 |
| BseDI | CCNNGG | 3 cut(s) | 21, 136, 256 |
| BseGI | GGATG | 2 cut(s) | 110, 206 |
| BseJI | GATNNNNATC | 1 cut(s) | 109 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 260 |
| BseMII | CTCAG | 2 cut(s) | 98, 260 |
| BshFI | GGCC | 1 cut(s) | 286 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 260 |
| BsnI | GGCC | 1 cut(s) | 286 |
| Bsp143I | GATC | 4 cut(s) | 4, 73, 172, 208 |
| BspANI | GGCC | 1 cut(s) | 286 |
| BspCNI | CTCAG | 2 cut(s) | 97, 259 |
| BspLI | GGNNCC | 1 cut(s) | 153 |
| BspPI | GGATC | 3 cut(s) | 12, 167, 216 |
| BssECI | CCNNGG | 3 cut(s) | 21, 136, 256 |
| BssMI | GATC | 4 cut(s) | 4, 73, 172, 208 |
| BssT1I | CCWWGG | 3 cut(s) | 21, 136, 256 |
| Bst2UI | CCWGG | 1 cut(s) | 198 |
| BstC8I | GCNNGC | 1 cut(s) | 36 |
| BstDEI | CTNAG | 2 cut(s) | 84, 246 |
| BstF5I | GGATG | 2 cut(s) | 110, 206 |
| BstKTI | GATC | 4 cut(s) | 7, 76, 175, 211 |
| BstMBI | GATC | 4 cut(s) | 4, 73, 172, 208 |
| BstNI | CCWGG | 1 cut(s) | 198 |
| BstNSI | RCATGY | 2 cut(s) | 68, 349 |
| BstSCI | CCNGG | 1 cut(s) | 196 |
| BsuRI | GGCC | 1 cut(s) | 286 |
| BtsCI | GGATG | 2 cut(s) | 110, 206 |
| Cac8I | GCNNGC | 1 cut(s) | 36 |
| Cfr13I | GGNCC | 5 cut(s) | 152, 284, 314, 323, 339 |
| CviAII | CATG | 3 cut(s) | 65, 146, 346 |
| CviJI | RGCY | 6 cut(s) | 38, 132, 286, 362, 410, 431 |
| CviKI_1 | RGCY | 6 cut(s) | 38, 132, 286, 362, 410, 431 |
| DdeI | CTNAG | 2 cut(s) | 84, 246 |
| DpnI | GATC | 4 cut(s) | 6, 75, 174, 210 |
| DpnII | GATC | 4 cut(s) | 4, 73, 172, 208 |
| Eco130I | CCWWGG | 3 cut(s) | 21, 136, 256 |
| Eco47I | GGWCC | 4 cut(s) | 152, 314, 323, 339 |
| Eco57I | CTGAAG | 1 cut(s) | 348 |
| EcoO109I | RGGNCCY | 2 cut(s) | 314, 339 |
| EcoRII | CCWGG | 1 cut(s) | 196 |
| EcoT14I | CCWWGG | 3 cut(s) | 21, 136, 256 |
| ErhI | CCWWGG | 3 cut(s) | 21, 136, 256 |
| FaeI | CATG | 3 cut(s) | 68, 149, 349 |
| FaiI | YATR | 7 cut(s) | 49, 66, 147, 171, 192, 347, 393 |
| FatI | CATG | 3 cut(s) | 64, 145, 345 |
| FbaI | TGATCA | 1 cut(s) | 73 |
| FokI | GGATG | 2 cut(s) | 117, 213 |
| FspBI | CTAG | 1 cut(s) | 417 |
| HaeIII | GGCC | 1 cut(s) | 286 |
| Hin1II | CATG | 3 cut(s) | 68, 149, 349 |
| HincII | GTYRAC | 1 cut(s) | 388 |
| HindII | GTYRAC | 1 cut(s) | 388 |
| HindIII | AAGCTT | 3 cut(s) | 36, 360, 429 |
| HinfI | GANTC | 2 cut(s) | 110, 250 |
| HpaI | GTTAAC | 1 cut(s) | 388 |
| HphI | GGTGA | 1 cut(s) | 203 |
| Hpy166II | GTNNAC | 3 cut(s) | 155, 228, 388 |
| Hpy188I | TCNGA | 2 cut(s) | 94, 249 |
| Hpy8I | GTNNAC | 3 cut(s) | 155, 228, 388 |
| HpyCH4IV | ACGT | 2 cut(s) | 160, 274 |
| HpyCH4V | TGCA | 3 cut(s) | 34, 58, 349 |
| HpyF3I | CTNAG | 2 cut(s) | 84, 246 |
| HpySE526I | ACGT | 2 cut(s) | 160, 274 |
| Hsp92II | CATG | 3 cut(s) | 68, 149, 349 |
| Ksp22I | TGATCA | 1 cut(s) | 73 |
| KspAI | GTTAAC | 1 cut(s) | 388 |
| Kzo9I | GATC | 4 cut(s) | 4, 73, 172, 208 |
| LpnPI | CCDG | 3 cut(s) | 183, 210, 351 |
| MaeI | CTAG | 1 cut(s) | 417 |
| MaeII | ACGT | 2 cut(s) | 160, 274 |
| MaeIII | GTNAC | 1 cut(s) | 67 |
| MalI | GATC | 4 cut(s) | 6, 75, 174, 210 |
| MboI | GATC | 4 cut(s) | 4, 73, 172, 208 |
| MluCI | AATT | 2 cut(s) | 27, 265 |
| MmeI | TCCRAC | 1 cut(s) | 295 |
| MnlI | CCTC | 7 cut(s) | 93, 95, 122, 198, 254, 288, 327 |
| MseI | TTAA | 1 cut(s) | 387 |
| MspR9I | CCNGG | 1 cut(s) | 198 |
| MvaI | CCWGG | 1 cut(s) | 198 |
| NdeII | GATC | 4 cut(s) | 4, 73, 172, 208 |
| NlaIII | CATG | 3 cut(s) | 68, 149, 349 |
| NlaIV | GGNNCC | 1 cut(s) | 153 |
| NmuCI | GTSAC | 1 cut(s) | 67 |
| NspI | RCATGY | 2 cut(s) | 68, 349 |
| PfeI | GAWTC | 2 cut(s) | 110, 250 |
| PfoI | TCCNGGA | 1 cut(s) | 196 |
| PpuMI | RGGWCCY | 2 cut(s) | 314, 339 |
| Psp5II | RGGWCCY | 2 cut(s) | 314, 339 |
| Psp6I | CCWGG | 1 cut(s) | 196 |
| PspGI | CCWGG | 1 cut(s) | 196 |
| PspN4I | GGNNCC | 1 cut(s) | 153 |
| PspPI | GGNCC | 5 cut(s) | 152, 284, 314, 323, 339 |
| PspPPI | RGGWCCY | 2 cut(s) | 314, 339 |
| SaqAI | TTAA | 1 cut(s) | 387 |
| Sau3AI | GATC | 4 cut(s) | 4, 73, 172, 208 |
| Sau96I | GGNCC | 5 cut(s) | 152, 284, 314, 323, 339 |
| ScrFI | CCNGG | 1 cut(s) | 198 |
| SetI | ASST | 9 cut(s) | 40, 163, 191, 277, 319, 341, 364, 412, 433 |
| SinI | GGWCC | 4 cut(s) | 152, 314, 323, 339 |
| SmlI | CTYRAG | 3 cut(s) | 279, 318, 426 |
| SmoI | CTYRAG | 3 cut(s) | 279, 318, 426 |
| SpeI | ACTAGT | 1 cut(s) | 416 |
| Sse9I | AATT | 2 cut(s) | 27, 265 |
| SspMI | CTAG | 1 cut(s) | 417 |
| StyD4I | CCNGG | 1 cut(s) | 196 |
| StyI | CCWWGG | 3 cut(s) | 21, 136, 256 |
| TaiI | ACGT | 2 cut(s) | 163, 277 |
| TaqI | TCGA | 1 cut(s) | 182 |
| TasI | AATT | 2 cut(s) | 27, 265 |
| TfiI | GAWTC | 2 cut(s) | 110, 250 |
| Tru1I | TTAA | 1 cut(s) | 387 |
| Tru9I | TTAA | 1 cut(s) | 387 |
| TseFI | GTSAC | 1 cut(s) | 67 |
| Tsp45I | GTSAC | 1 cut(s) | 67 |
| VpaK11BI | GGWCC | 4 cut(s) | 152, 314, 323, 339 |
| XapI | RAATTY | 2 cut(s) | 27, 265 |
| XceI | RCATGY | 2 cut(s) | 68, 349 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 143 |
| XspI | CTAG | 1 cut(s) | 417 |