transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 469, 1142 |
| AccB1I | GGYRCC | 1 cut(s) | 940 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1095 |
| AclWI | GGATC | 2 cut(s) | 287, 550 |
| AcoI | YGGCCR | 1 cut(s) | 1104 |
| AcsI | RAATTY | 3 cut(s) | 154, 629, 843 |
| AcuI | CTGAAG | 1 cut(s) | 684 |
| AfaI | GTAC | 5 cut(s) | 84, 168, 385, 983, 1079 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 754, 1095 |
| AgeI | ACCGGT | 1 cut(s) | 1249 |
| AgsI | TTSAA | 9 cut(s) | 464, 610, 743, 767, 796, 979, 1072, 1379, 1500 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 889, 921 |
| AleI | CACNNNNGTG | 1 cut(s) | 1286 |
| AluBI | AGCT | 4 cut(s) | 20, 439, 1198, 1448 |
| AluI | AGCT | 4 cut(s) | 20, 439, 1198, 1448 |
| Alw21I | GWGCWC | 1 cut(s) | 180 |
| Alw26I | GTCTC | 3 cut(s) | 608, 990, 998 |
| AlwI | GGATC | 2 cut(s) | 287, 550 |
| Ama87I | CYCGRG | 2 cut(s) | 950, 1175 |
| AoxI | GGCC | 1 cut(s) | 1104 |
| ApoI | RAATTY | 3 cut(s) | 154, 629, 843 |
| AseI | ATTAAT | 2 cut(s) | 393, 912 |
| AsiGI | ACCGGT | 1 cut(s) | 1249 |
| AspLEI | GCGC | 1 cut(s) | 730 |
| AspS9I | GGNCC | 3 cut(s) | 283, 1098, 1252 |
| AsuC2I | CCSGG | 2 cut(s) | 281, 500 |
| AsuHPI | GGTGA | 2 cut(s) | 1239, 1300 |
| AsuNHI | GCTAGC | 1 cut(s) | 20 |
| AvaI | CYCGRG | 2 cut(s) | 950, 1175 |
| AvaII | GGWCC | 3 cut(s) | 283, 1098, 1252 |
| BaeGI | GKGCMC | 1 cut(s) | 1317 |
| BanI | GGYRCC | 1 cut(s) | 940 |
| BbsI | GAAGAC | 2 cut(s) | 574, 750 |
| Bbv12I | GWGCWC | 1 cut(s) | 180 |
| BccI | CCATC | 3 cut(s) | 443, 629, 1089 |
| BceAI | ACGGC | 3 cut(s) | 844, 1053, 1342 |
| BciVI | GTATCC | 1 cut(s) | 687 |
| BclI | TGATCA | 1 cut(s) | 688 |
| BcnI | CCSGG | 2 cut(s) | 281, 500 |
| BcoDI | GTCTC | 3 cut(s) | 608, 990, 998 |
| BfaI | CTAG | 3 cut(s) | 21, 249, 1154 |
| BfuAI | ACCTGC | 2 cut(s) | 469, 1142 |
| BfuI | GTATCC | 1 cut(s) | 687 |
| BmcAI | AGTACT | 1 cut(s) | 168 |
| Bme1390I | CCNGG | 2 cut(s) | 281, 500 |
| Bme18I | GGWCC | 3 cut(s) | 283, 1098, 1252 |
| BmeT110I | CYCGRG | 2 cut(s) | 950, 1175 |
| BmgT120I | GGNCC | 3 cut(s) | 283, 1098, 1252 |
| BmiI | GGNNCC | 1 cut(s) | 942 |
| BmrFI | CCNGG | 2 cut(s) | 281, 500 |
| BmsI | GCATC | 5 cut(s) | 369, 428, 748, 1150, 1494 |
| BmtI | GCTAGC | 1 cut(s) | 24 |
| BpiI | GAAGAC | 2 cut(s) | 574, 750 |
| BpmI | CTGGAG | 2 cut(s) | 1296, 1434 |
| Bpu10I | CCTNAGC | 1 cut(s) | 16 |
| BpuEI | CTTGAG | 1 cut(s) | 155 |
| BpuMI | CCSGG | 2 cut(s) | 281, 500 |
| Bsa29I | ATCGAT | 1 cut(s) | 1456 |
| BsaI | GGTCTC | 1 cut(s) | 990 |
| BsaJI | CCNNGG | 2 cut(s) | 279, 1101 |
| BsaWI | WCCGGW | 1 cut(s) | 1249 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1269, 1299 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 754, 1095 |
| Bse118I | RCCGGY | 2 cut(s) | 1249, 1388 |
| Bse1I | ACTGG | 1 cut(s) | 1013 |
| Bse3DI | GCAATG | 1 cut(s) | 1047 |
| BseCI | ATCGAT | 1 cut(s) | 1456 |
| BseDI | CCNNGG | 2 cut(s) | 279, 1101 |
| BseGI | GGATG | 3 cut(s) | 386, 763, 1100 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 754, 1095 |
| BseMI | GCAATG | 1 cut(s) | 1047 |
| BseMII | CTCAG | 1 cut(s) | 942 |
| BseNI | ACTGG | 1 cut(s) | 1013 |
| BseRI | GAGGAG | 2 cut(s) | 534, 1172 |
| BseSI | GKGCMC | 1 cut(s) | 1317 |
| BsgI | GTGCAG | 2 cut(s) | 497, 574 |
| BshFI | GGCC | 1 cut(s) | 1106 |
| BshNI | GGYRCC | 1 cut(s) | 940 |
| BshTI | ACCGGT | 1 cut(s) | 1249 |
| BshVI | ATCGAT | 1 cut(s) | 1456 |
| BsiHKAI | GWGCWC | 1 cut(s) | 180 |
| BsiHKCI | CYCGRG | 2 cut(s) | 950, 1175 |
| BsiSI | CCGG | 4 cut(s) | 281, 500, 1250, 1389 |
| BslFI | GGGAC | 1 cut(s) | 820 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 754, 1095 |
| BsmAI | GTCTC | 3 cut(s) | 608, 990, 998 |
| BsmBI | CGTCTC | 1 cut(s) | 608 |
| BsmFI | GGGAC | 1 cut(s) | 820 |
| BsnI | GGCC | 1 cut(s) | 1106 |
| Bso31I | GGTCTC | 1 cut(s) | 990 |
| BsoBI | CYCGRG | 2 cut(s) | 950, 1175 |
| Bsp1286I | GDGCHC | 2 cut(s) | 180, 1317 |
| Bsp1407I | TGTACA | 1 cut(s) | 82 |
| Bsp143I | GATC | 6 cut(s) | 292, 555, 688, 1340, 1453, 1457 |
| BspANI | GGCC | 1 cut(s) | 1106 |
| BspCNI | CTCAG | 2 cut(s) | 941, 1536 |
| BspDI | ATCGAT | 1 cut(s) | 1456 |
| BspHI | TCATGA | 1 cut(s) | 576 |
| BspLI | GGNNCC | 1 cut(s) | 942 |
| BspMI | ACCTGC | 2 cut(s) | 469, 1142 |
| BspOI | GCTAGC | 1 cut(s) | 24 |
| BspPI | GGATC | 2 cut(s) | 287, 550 |
| BspT107I | GGYRCC | 1 cut(s) | 940 |
| BspTNI | GGTCTC | 1 cut(s) | 990 |
| BsrDI | GCAATG | 1 cut(s) | 1047 |
| BsrFI | RCCGGY | 2 cut(s) | 1249, 1388 |
| BsrGI | TGTACA | 1 cut(s) | 82 |
| BsrI | ACTGG | 1 cut(s) | 1013 |
| BssAI | RCCGGY | 2 cut(s) | 1249, 1388 |
| BssECI | CCNNGG | 2 cut(s) | 279, 1101 |
| BssMI | GATC | 6 cut(s) | 292, 555, 688, 1340, 1453, 1457 |
| BssT1I | CCWWGG | 1 cut(s) | 1101 |
| Bst4CI | ACNGT | 1 cut(s) | 1285 |
| Bst6I | CTCTTC | 1 cut(s) | 1030 |
| BstAUI | TGTACA | 1 cut(s) | 82 |
| BstC8I | GCNNGC | 3 cut(s) | 22, 589, 1139 |
| BstDEI | CTNAG | 4 cut(s) | 16, 430, 928, 1523 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 752 |
| BstF5I | GGATG | 3 cut(s) | 386, 763, 1100 |
| BstHHI | GCGC | 1 cut(s) | 730 |
| BstKTI | GATC | 6 cut(s) | 295, 558, 691, 1343, 1456, 1460 |
| BstMAI | GTCTC | 3 cut(s) | 608, 990, 998 |
| BstMBI | GATC | 6 cut(s) | 292, 555, 688, 1340, 1453, 1457 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 859, 1143 |
| BstNSI | RCATGY | 1 cut(s) | 1141 |
| BstSCI | CCNGG | 2 cut(s) | 279, 498 |
| BstSLI | GKGCMC | 1 cut(s) | 1317 |
| BstV2I | GAAGAC | 2 cut(s) | 574, 750 |
| Bsu15I | ATCGAT | 1 cut(s) | 1456 |
| BsuI | GTATCC | 1 cut(s) | 687 |
| BsuRI | GGCC | 1 cut(s) | 1106 |
| BsuTUI | ATCGAT | 1 cut(s) | 1456 |
| BtgZI | GCGATG | 1 cut(s) | 1127 |
| BtsCI | GGATG | 3 cut(s) | 386, 763, 1100 |
| BtsI | GCAGTG | 1 cut(s) | 857 |
| BtsIMutI | CAGTG | 3 cut(s) | 857, 936, 1281 |
| BveI | ACCTGC | 2 cut(s) | 469, 1142 |
| Cac8I | GCNNGC | 3 cut(s) | 22, 589, 1139 |
| CciI | TCATGA | 1 cut(s) | 576 |
| CfoI | GCGC | 1 cut(s) | 730 |
| Cfr10I | RCCGGY | 2 cut(s) | 1249, 1388 |
| Cfr13I | GGNCC | 3 cut(s) | 283, 1098, 1252 |
| ClaI | ATCGAT | 1 cut(s) | 1456 |
| Csp6I | GTAC | 5 cut(s) | 83, 167, 384, 982, 1078 |
| CspAI | ACCGGT | 1 cut(s) | 1249 |
| CviAII | CATG | 7 cut(s) | 370, 400, 523, 577, 670, 1138, 1508 |
| CviQI | GTAC | 5 cut(s) | 83, 167, 384, 982, 1078 |
| DdeI | CTNAG | 4 cut(s) | 16, 430, 928, 1523 |
| DpnI | GATC | 6 cut(s) | 294, 557, 690, 1342, 1455, 1459 |
| DpnII | GATC | 6 cut(s) | 292, 555, 688, 1340, 1453, 1457 |
| DraI | TTTAAA | 2 cut(s) | 129, 958 |
| EaeI | YGGCCR | 1 cut(s) | 1104 |
| Eam1104I | CTCTTC | 1 cut(s) | 1030 |
| EarI | CTCTTC | 1 cut(s) | 1030 |
| Eco130I | CCWWGG | 1 cut(s) | 1101 |
| Eco31I | GGTCTC | 1 cut(s) | 990 |
| Eco47I | GGWCC | 3 cut(s) | 283, 1098, 1252 |
| Eco57I | CTGAAG | 1 cut(s) | 684 |
| Eco88I | CYCGRG | 2 cut(s) | 950, 1175 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 752 |
| EcoRI | GAATTC | 1 cut(s) | 843 |
| EcoT14I | CCWWGG | 1 cut(s) | 1101 |
| EcoT22I | ATGCAT | 3 cut(s) | 421, 1143, 1509 |
| ErhI | CCWWGG | 1 cut(s) | 1101 |
| Esp3I | CGTCTC | 1 cut(s) | 608 |
| FaeI | CATG | 7 cut(s) | 373, 403, 526, 580, 673, 1141, 1511 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 723, 755 |
| FaqI | GGGAC | 1 cut(s) | 820 |
| FatI | CATG | 7 cut(s) | 369, 399, 522, 576, 669, 1137, 1507 |
| FbaI | TGATCA | 1 cut(s) | 688 |
| FokI | GGATG | 3 cut(s) | 373, 770, 1107 |
| FspBI | CTAG | 3 cut(s) | 21, 249, 1154 |
| GlaI | GCGC | 1 cut(s) | 729 |
| GsuI | CTGGAG | 2 cut(s) | 1296, 1434 |
| HaeIII | GGCC | 1 cut(s) | 1106 |
| HapII | CCGG | 4 cut(s) | 281, 500, 1250, 1389 |
| HhaI | GCGC | 1 cut(s) | 730 |
| Hin1II | CATG | 7 cut(s) | 373, 403, 526, 580, 673, 1141, 1511 |
| Hin6I | GCGC | 1 cut(s) | 728 |
| HinP1I | GCGC | 1 cut(s) | 728 |
| HincII | GTYRAC | 1 cut(s) | 621 |
| HindII | GTYRAC | 1 cut(s) | 621 |
| HindIII | AAGCTT | 1 cut(s) | 1196 |
| HinfI | GANTC | 6 cut(s) | 245, 530, 719, 792, 934, 1278 |
| HpaI | GTTAAC | 1 cut(s) | 621 |
| HpaII | CCGG | 4 cut(s) | 281, 500, 1250, 1389 |
| HphI | GGTGA | 2 cut(s) | 1239, 1300 |
| Hpy166II | GTNNAC | 2 cut(s) | 621, 1168 |
| Hpy188I | TCNGA | 2 cut(s) | 664, 1526 |
| Hpy8I | GTNNAC | 2 cut(s) | 621, 1168 |
| HpyAV | CCTTC | 4 cut(s) | 35, 954, 1039, 1066 |
| HpyCH4III | ACNGT | 1 cut(s) | 1285 |
| HpyCH4IV | ACGT | 3 cut(s) | 269, 378, 617 |
| HpyCH4V | TGCA | 7 cut(s) | 419, 478, 591, 1137, 1141, 1265, 1507 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 859, 1143 |
| HpyF3I | CTNAG | 4 cut(s) | 16, 430, 928, 1523 |
| HpySE526I | ACGT | 3 cut(s) | 269, 378, 617 |
| Hsp92II | CATG | 7 cut(s) | 373, 403, 526, 580, 673, 1141, 1511 |
| HspAI | GCGC | 1 cut(s) | 728 |
| Ksp22I | TGATCA | 1 cut(s) | 688 |
| KspAI | GTTAAC | 1 cut(s) | 621 |
| Kzo9I | GATC | 6 cut(s) | 292, 555, 688, 1340, 1453, 1457 |
| LmnI | GCTCC | 1 cut(s) | 1453 |
| LweI | GCATC | 5 cut(s) | 369, 428, 748, 1150, 1494 |
| MaeI | CTAG | 3 cut(s) | 21, 249, 1154 |
| MaeII | ACGT | 3 cut(s) | 269, 378, 617 |
| MaeIII | GTNAC | 3 cut(s) | 265, 921, 1279 |
| MalI | GATC | 6 cut(s) | 294, 557, 690, 1342, 1455, 1459 |
| MboI | GATC | 6 cut(s) | 292, 555, 688, 1340, 1453, 1457 |
| MboII | GAAGA | 7 cut(s) | 487, 539, 579, 755, 1017, 1303, 1511 |
| MhlI | GDGCHC | 2 cut(s) | 180, 1317 |
| MlyI | GAGTC | 2 cut(s) | 254, 1287 |
| Mph1103I | ATGCAT | 3 cut(s) | 421, 1143, 1509 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1286 |
| MspI | CCGG | 4 cut(s) | 281, 500, 1250, 1389 |
| MspR9I | CCNGG | 2 cut(s) | 281, 500 |
| MssI | GTTTAAAC | 1 cut(s) | 958 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 859, 1143 |
| NciI | CCSGG | 2 cut(s) | 281, 500 |
| NdeII | GATC | 6 cut(s) | 292, 555, 688, 1340, 1453, 1457 |
| NheI | GCTAGC | 1 cut(s) | 20 |
| NlaIII | CATG | 7 cut(s) | 373, 403, 526, 580, 673, 1141, 1511 |
| NlaIV | GGNNCC | 1 cut(s) | 942 |
| NmuCI | GTSAC | 1 cut(s) | 1279 |
| NsiI | ATGCAT | 3 cut(s) | 421, 1143, 1509 |
| NspI | RCATGY | 1 cut(s) | 1141 |
| OliI | CACNNNNGTG | 1 cut(s) | 1286 |
| PaeI | GCATGC | 1 cut(s) | 1141 |
| PaeR7I | CTCGAG | 2 cut(s) | 950, 1175 |
| PagI | TCATGA | 1 cut(s) | 576 |
| PfeI | GAWTC | 4 cut(s) | 530, 719, 792, 934 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1095 |
| PinAI | ACCGGT | 1 cut(s) | 1249 |
| PleI | GAGTC | 2 cut(s) | 253, 1286 |
| PmeI | GTTTAAAC | 1 cut(s) | 958 |
| PpsI | GAGTC | 2 cut(s) | 253, 1286 |
| PshBI | ATTAAT | 2 cut(s) | 393, 912 |
| PspN4I | GGNNCC | 1 cut(s) | 942 |
| PspPI | GGNCC | 3 cut(s) | 283, 1098, 1252 |
| PspXI | VCTCGAGB | 1 cut(s) | 950 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 281, 313 |
| RsaI | GTAC | 5 cut(s) | 84, 168, 385, 983, 1079 |
| RsaNI | GTAC | 5 cut(s) | 83, 167, 384, 982, 1078 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1286 |
| Sau3AI | GATC | 6 cut(s) | 292, 555, 688, 1340, 1453, 1457 |
| Sau96I | GGNCC | 3 cut(s) | 283, 1098, 1252 |
| ScaI | AGTACT | 1 cut(s) | 168 |
| SchI | GAGTC | 2 cut(s) | 254, 1287 |
| ScrFI | CCNGG | 2 cut(s) | 281, 500 |
| SduI | GDGCHC | 2 cut(s) | 180, 1317 |
| SfaNI | GCATC | 5 cut(s) | 369, 428, 748, 1150, 1494 |
| Sfr274I | CTCGAG | 2 cut(s) | 950, 1175 |
| SinI | GGWCC | 3 cut(s) | 283, 1098, 1252 |
| SlaI | CTCGAG | 2 cut(s) | 950, 1175 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1286 |
| SmlI | CTYRAG | 3 cut(s) | 170, 950, 1175 |
| SmoI | CTYRAG | 3 cut(s) | 170, 950, 1175 |
| SphI | GCATGC | 1 cut(s) | 1141 |
| SspMI | CTAG | 3 cut(s) | 21, 249, 1154 |
| StyD4I | CCNGG | 2 cut(s) | 279, 498 |
| StyI | CCWWGG | 1 cut(s) | 1101 |
| TaaI | ACNGT | 1 cut(s) | 1285 |
| TaiI | ACGT | 3 cut(s) | 272, 381, 620 |
| TaqI | TCGA | 6 cut(s) | 214, 951, 1176, 1343, 1424, 1456 |
| TatI | WGTACW | 5 cut(s) | 82, 166, 383, 981, 1077 |
| TfiI | GAWTC | 4 cut(s) | 530, 719, 792, 934 |
| TscAI | CASTG | 3 cut(s) | 864, 936, 1288 |
| TseFI | GTSAC | 1 cut(s) | 1279 |
| Tsp45I | GTSAC | 1 cut(s) | 1279 |
| TspRI | CASTG | 3 cut(s) | 864, 936, 1288 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1095 |
| VpaK11BI | GGWCC | 3 cut(s) | 283, 1098, 1252 |
| VspI | ATTAAT | 2 cut(s) | 393, 912 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 752 |
| XapI | RAATTY | 3 cut(s) | 154, 629, 843 |
| XbaI | TCTAGA | 1 cut(s) | 1153 |
| XceI | RCATGY | 1 cut(s) | 1141 |
| XhoI | CTCGAG | 2 cut(s) | 950, 1175 |
| XspI | CTAG | 3 cut(s) | 21, 249, 1154 |
| ZrmI | AGTACT | 1 cut(s) | 168 |
| Zsp2I | ATGCAT | 3 cut(s) | 421, 1143, 1509 |