transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 14 |
| Acc36I | ACCTGC | 1 cut(s) | 14 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 143 |
| AclWI | GGATC | 2 cut(s) | 371, 384 |
| AcsI | RAATTY | 1 cut(s) | 186 |
| AfaI | GTAC | 1 cut(s) | 479 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 143, 257 |
| AflII | CTTAAG | 1 cut(s) | 530 |
| AgsI | TTSAA | 4 cut(s) | 181, 271, 485, 505 |
| AjnI | CCWGG | 2 cut(s) | 142, 379 |
| AluBI | AGCT | 2 cut(s) | 285, 370 |
| AluI | AGCT | 2 cut(s) | 285, 370 |
| AlwI | GGATC | 2 cut(s) | 371, 384 |
| AoxI | GGCC | 1 cut(s) | 108 |
| ApoI | RAATTY | 1 cut(s) | 186 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 266 |
| AspS9I | GGNCC | 1 cut(s) | 302 |
| AsuHPI | GGTGA | 1 cut(s) | 394 |
| AsuNHI | GCTAGC | 1 cut(s) | 449 |
| AvaII | GGWCC | 1 cut(s) | 302 |
| BamHI | GGATCC | 1 cut(s) | 376 |
| BbsI | GAAGAC | 1 cut(s) | 154 |
| BciT130I | CCWGG | 2 cut(s) | 144, 381 |
| BfaI | CTAG | 4 cut(s) | 35, 86, 450, 488 |
| BfrI | CTTAAG | 1 cut(s) | 530 |
| BfuAI | ACCTGC | 1 cut(s) | 14 |
| Bme1390I | CCNGG | 2 cut(s) | 144, 381 |
| Bme18I | GGWCC | 1 cut(s) | 302 |
| BmgT120I | GGNCC | 1 cut(s) | 302 |
| BmiI | GGNNCC | 2 cut(s) | 63, 378 |
| BmrFI | CCNGG | 2 cut(s) | 144, 381 |
| BmsI | GCATC | 2 cut(s) | 423, 462 |
| BmtI | GCTAGC | 1 cut(s) | 453 |
| BpiI | GAAGAC | 1 cut(s) | 154 |
| BpuEI | CTTGAG | 1 cut(s) | 356 |
| Bsa29I | ATCGAT | 1 cut(s) | 9 |
| BsaJI | CCNNGG | 1 cut(s) | 142 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 143, 257 |
| Bse118I | RCCGGY | 1 cut(s) | 250 |
| BseBI | CCWGG | 2 cut(s) | 144, 381 |
| BseCI | ATCGAT | 1 cut(s) | 9 |
| BseDI | CCNNGG | 1 cut(s) | 142 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 143, 257 |
| BseMII | CTCAG | 1 cut(s) | 318 |
| BsgI | GTGCAG | 1 cut(s) | 360 |
| BshFI | GGCC | 1 cut(s) | 110 |
| BshVI | ATCGAT | 1 cut(s) | 9 |
| BsiSI | CCGG | 1 cut(s) | 251 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 143, 257 |
| BsmI | GAATGC | 1 cut(s) | 25 |
| BsnI | GGCC | 1 cut(s) | 110 |
| Bsp143I | GATC | 2 cut(s) | 10, 376 |
| BspANI | GGCC | 1 cut(s) | 110 |
| BspCNI | CTCAG | 1 cut(s) | 319 |
| BspDI | ATCGAT | 1 cut(s) | 9 |
| BspLI | GGNNCC | 2 cut(s) | 63, 378 |
| BspMI | ACCTGC | 1 cut(s) | 14 |
| BspOI | GCTAGC | 1 cut(s) | 453 |
| BspPI | GGATC | 2 cut(s) | 371, 384 |
| BspTI | CTTAAG | 1 cut(s) | 530 |
| BsrFI | RCCGGY | 1 cut(s) | 250 |
| BssAI | RCCGGY | 1 cut(s) | 250 |
| BssECI | CCNNGG | 1 cut(s) | 142 |
| BssMI | GATC | 2 cut(s) | 10, 376 |
| Bst2UI | CCWGG | 2 cut(s) | 144, 381 |
| BstAFI | CTTAAG | 1 cut(s) | 530 |
| BstC8I | GCNNGC | 3 cut(s) | 164, 252, 451 |
| BstDEI | CTNAG | 2 cut(s) | 200, 327 |
| BstKTI | GATC | 2 cut(s) | 13, 379 |
| BstMBI | GATC | 2 cut(s) | 10, 376 |
| BstNI | CCWGG | 2 cut(s) | 144, 381 |
| BstNSI | RCATGY | 1 cut(s) | 250 |
| BstSCI | CCNGG | 2 cut(s) | 142, 379 |
| BstV2I | GAAGAC | 1 cut(s) | 154 |
| BstX2I | RGATCY | 1 cut(s) | 376 |
| BstYI | RGATCY | 1 cut(s) | 376 |
| Bsu15I | ATCGAT | 1 cut(s) | 9 |
| BsuRI | GGCC | 1 cut(s) | 110 |
| BsuTUI | ATCGAT | 1 cut(s) | 9 |
| BtgZI | GCGATG | 1 cut(s) | 446 |
| BtsI | GCAGTG | 1 cut(s) | 348 |
| BtsIMutI | CAGTG | 1 cut(s) | 348 |
| BveI | ACCTGC | 1 cut(s) | 14 |
| Cac8I | GCNNGC | 3 cut(s) | 164, 252, 451 |
| Cfr10I | RCCGGY | 1 cut(s) | 250 |
| Cfr13I | GGNCC | 1 cut(s) | 302 |
| ClaI | ATCGAT | 1 cut(s) | 9 |
| Csp6I | GTAC | 1 cut(s) | 478 |
| CviAII | CATG | 4 cut(s) | 14, 71, 247, 308 |
| CviJI | RGCY | 5 cut(s) | 69, 110, 285, 370, 509 |
| CviKI_1 | RGCY | 5 cut(s) | 69, 110, 285, 370, 509 |
| CviQI | GTAC | 1 cut(s) | 478 |
| DdeI | CTNAG | 2 cut(s) | 200, 327 |
| DpnI | GATC | 2 cut(s) | 12, 378 |
| DpnII | GATC | 2 cut(s) | 10, 376 |
| Eco47I | GGWCC | 1 cut(s) | 302 |
| EcoRII | CCWGG | 2 cut(s) | 142, 379 |
| FaeI | CATG | 4 cut(s) | 17, 74, 250, 311 |
| FatI | CATG | 4 cut(s) | 13, 70, 246, 307 |
| FauNDI | CATATG | 1 cut(s) | 256 |
| FspBI | CTAG | 4 cut(s) | 35, 86, 450, 488 |
| HaeIII | GGCC | 1 cut(s) | 110 |
| HapII | CCGG | 1 cut(s) | 251 |
| Hin1II | CATG | 4 cut(s) | 17, 74, 250, 311 |
| HincII | GTYRAC | 1 cut(s) | 217 |
| HindII | GTYRAC | 1 cut(s) | 217 |
| HpaI | GTTAAC | 1 cut(s) | 217 |
| HpaII | CCGG | 1 cut(s) | 251 |
| HphI | GGTGA | 1 cut(s) | 394 |
| Hpy166II | GTNNAC | 2 cut(s) | 217, 478 |
| Hpy188I | TCNGA | 1 cut(s) | 328 |
| Hpy8I | GTNNAC | 2 cut(s) | 217, 478 |
| HpyAV | CCTTC | 3 cut(s) | 307, 421, 491 |
| HpyCH4V | TGCA | 3 cut(s) | 23, 341, 349 |
| HpyF3I | CTNAG | 2 cut(s) | 200, 327 |
| Hsp92II | CATG | 4 cut(s) | 17, 74, 250, 311 |
| KroI | GCCGGC | 1 cut(s) | 250 |
| KroNI | GCCGGC | 1 cut(s) | 252 |
| KspAI | GTTAAC | 1 cut(s) | 217 |
| Kzo9I | GATC | 2 cut(s) | 10, 376 |
| LpnPI | CCDG | 7 cut(s) | 9, 129, 152, 156, 264, 366, 393 |
| LweI | GCATC | 2 cut(s) | 423, 462 |
| MaeI | CTAG | 4 cut(s) | 35, 86, 450, 488 |
| MaeIII | GTNAC | 1 cut(s) | 28 |
| MalI | GATC | 2 cut(s) | 12, 378 |
| MboI | GATC | 2 cut(s) | 10, 376 |
| MboII | GAAGA | 3 cut(s) | 92, 159, 259 |
| MfeI | CAATTG | 1 cut(s) | 54 |
| MflI | RGATCY | 1 cut(s) | 376 |
| MluCI | AATT | 2 cut(s) | 54, 186 |
| MnlI | CCTC | 2 cut(s) | 52, 91 |
| MroNI | GCCGGC | 1 cut(s) | 250 |
| MroXI | GAANNNNTTC | 1 cut(s) | 266 |
| MseI | TTAA | 4 cut(s) | 216, 278, 461, 531 |
| MslI | CAYNNNNRTG | 1 cut(s) | 18 |
| MspCI | CTTAAG | 1 cut(s) | 530 |
| MspI | CCGG | 1 cut(s) | 251 |
| MspR9I | CCNGG | 2 cut(s) | 144, 381 |
| MunI | CAATTG | 1 cut(s) | 54 |
| Mva1269I | GAATGC | 1 cut(s) | 25 |
| MvaI | CCWGG | 2 cut(s) | 144, 381 |
| NaeI | GCCGGC | 1 cut(s) | 252 |
| NdeI | CATATG | 1 cut(s) | 256 |
| NdeII | GATC | 2 cut(s) | 10, 376 |
| NgoMIV | GCCGGC | 1 cut(s) | 250 |
| NheI | GCTAGC | 1 cut(s) | 449 |
| NlaIII | CATG | 4 cut(s) | 17, 74, 250, 311 |
| NlaIV | GGNNCC | 2 cut(s) | 63, 378 |
| NmeAIII | GCCGAG | 1 cut(s) | 136 |
| NspI | RCATGY | 1 cut(s) | 250 |
| PaqCI | CACCTGC | 1 cut(s) | 14 |
| PctI | GAATGC | 1 cut(s) | 25 |
| PdiI | GCCGGC | 1 cut(s) | 252 |
| PdmI | GAANNNNTTC | 1 cut(s) | 266 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 143 |
| PfoI | TCCNGGA | 1 cut(s) | 379 |
| Psp6I | CCWGG | 2 cut(s) | 142, 379 |
| PspGI | CCWGG | 2 cut(s) | 142, 379 |
| PspN4I | GGNNCC | 2 cut(s) | 63, 378 |
| PspPI | GGNCC | 1 cut(s) | 302 |
| PsuI | RGATCY | 1 cut(s) | 376 |
| RsaI | GTAC | 1 cut(s) | 479 |
| RsaNI | GTAC | 1 cut(s) | 478 |
| RseI | CAYNNNNRTG | 1 cut(s) | 18 |
| SaqAI | TTAA | 4 cut(s) | 216, 278, 461, 531 |
| Sau3AI | GATC | 2 cut(s) | 10, 376 |
| Sau96I | GGNCC | 1 cut(s) | 302 |
| ScrFI | CCNGG | 2 cut(s) | 144, 381 |
| SetI | ASST | 7 cut(s) | 28, 226, 287, 318, 372, 483, 493 |
| SfaNI | GCATC | 2 cut(s) | 423, 462 |
| SinI | GGWCC | 1 cut(s) | 302 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 18 |
| SmlI | CTYRAG | 2 cut(s) | 371, 530 |
| SmoI | CTYRAG | 2 cut(s) | 371, 530 |
| Sse9I | AATT | 2 cut(s) | 54, 186 |
| SspMI | CTAG | 4 cut(s) | 35, 86, 450, 488 |
| StyD4I | CCNGG | 2 cut(s) | 142, 379 |
| TaqI | TCGA | 1 cut(s) | 9 |
| TasI | AATT | 2 cut(s) | 54, 186 |
| Tru1I | TTAA | 4 cut(s) | 216, 278, 461, 531 |
| Tru9I | TTAA | 4 cut(s) | 216, 278, 461, 531 |
| TscAI | CASTG | 1 cut(s) | 348 |
| TspDTI | ATGAA | 2 cut(s) | 17, 510 |
| TspGWI | ACGGA | 1 cut(s) | 463 |
| TspRI | CASTG | 1 cut(s) | 348 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 143 |
| Vha464I | CTTAAG | 1 cut(s) | 530 |
| VpaK11BI | GGWCC | 1 cut(s) | 302 |
| XapI | RAATTY | 1 cut(s) | 186 |
| XceI | RCATGY | 1 cut(s) | 250 |
| XmnI | GAANNNNTTC | 1 cut(s) | 266 |
| XspI | CTAG | 4 cut(s) | 35, 86, 450, 488 |