tRNA rRNA methyltransferase (SpoU) family protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 331 |
| Acc65I | GGTACC | 1 cut(s) | 343 |
| AccB1I | GGYRCC | 1 cut(s) | 343 |
| AciI | CCGC | 1 cut(s) | 1277 |
| AclI | AACGTT | 1 cut(s) | 501 |
| AcoI | YGGCCR | 1 cut(s) | 1457 |
| AcsI | RAATTY | 5 cut(s) | 97, 454, 791, 1214, 1514 |
| AcuI | CTGAAG | 1 cut(s) | 920 |
| AfaI | GTAC | 2 cut(s) | 120, 345 |
| AfeI | AGCGCT | 1 cut(s) | 514 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 408 |
| AgsI | TTSAA | 7 cut(s) | 312, 359, 460, 541, 797, 958, 1115 |
| AjnI | CCWGG | 1 cut(s) | 1067 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 292, 324 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 550, 582 |
| AluBI | AGCT | 3 cut(s) | 566, 893, 1399 |
| AluI | AGCT | 3 cut(s) | 566, 893, 1399 |
| Alw21I | GWGCWC | 2 cut(s) | 177, 1137 |
| Alw26I | GTCTC | 1 cut(s) | 1264 |
| Alw44I | GTGCAC | 1 cut(s) | 1133 |
| Aor51HI | AGCGCT | 1 cut(s) | 514 |
| AoxI | GGCC | 1 cut(s) | 1457 |
| ApaLI | GTGCAC | 1 cut(s) | 1133 |
| ApeKI | GCWGC | 2 cut(s) | 248, 1396 |
| ApoI | RAATTY | 5 cut(s) | 97, 454, 791, 1214, 1514 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1020, 1052 |
| Asp718I | GGTACC | 1 cut(s) | 343 |
| AspA2I | CCTAGG | 1 cut(s) | 253 |
| AspLEI | GCGC | 1 cut(s) | 515 |
| AsuHPI | GGTGA | 1 cut(s) | 26 |
| AsuII | TTCGAA | 1 cut(s) | 1191 |
| AvrII | CCTAGG | 1 cut(s) | 253 |
| BaeGI | GKGCMC | 2 cut(s) | 1137, 1308 |
| BanI | GGYRCC | 1 cut(s) | 343 |
| Bbv12I | GWGCWC | 2 cut(s) | 177, 1137 |
| BbvI | GCAGC | 2 cut(s) | 235, 1408 |
| BccI | CCATC | 5 cut(s) | 238, 548, 878, 1282, 1339 |
| BceAI | ACGGC | 2 cut(s) | 202, 1324 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 498, 532 |
| BciT130I | CCWGG | 1 cut(s) | 1069 |
| BcoDI | GTCTC | 1 cut(s) | 1264 |
| BfaI | CTAG | 7 cut(s) | 141, 222, 254, 276, 563, 947, 1095 |
| BfoI | RGCGCY | 1 cut(s) | 516 |
| BfuAI | ACCTGC | 1 cut(s) | 331 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 257 |
| BisI | GCNGC | 3 cut(s) | 249, 1278, 1397 |
| BlnI | CCTAGG | 1 cut(s) | 253 |
| BlsI | GCNGC | 3 cut(s) | 250, 1279, 1398 |
| Bme1390I | CCNGG | 1 cut(s) | 1069 |
| BmiI | GGNNCC | 2 cut(s) | 345, 392 |
| BmrFI | CCNGG | 1 cut(s) | 1069 |
| BmsI | GCATC | 5 cut(s) | 124, 146, 591, 982, 1033 |
| BpmI | CTGGAG | 1 cut(s) | 1433 |
| Bpu10I | CCTNAGC | 2 cut(s) | 894, 1202 |
| Bpu14I | TTCGAA | 1 cut(s) | 1191 |
| BsaBI | GATNNNNATC | 1 cut(s) | 420 |
| BsaJI | CCNNGG | 2 cut(s) | 153, 253 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 550, 580 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 408 |
| Bse3DI | GCAATG | 1 cut(s) | 260 |
| Bse8I | GATNNNNATC | 1 cut(s) | 420 |
| BseBI | CCWGG | 1 cut(s) | 1069 |
| BseDI | CCNNGG | 2 cut(s) | 153, 253 |
| BseGI | GGATG | 7 cut(s) | 139, 271, 886, 969, 1293, 1339, 1441 |
| BseJI | GATNNNNATC | 1 cut(s) | 420 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 408 |
| BseMI | GCAATG | 1 cut(s) | 260 |
| BseRI | GAGGAG | 1 cut(s) | 561 |
| BseSI | GKGCMC | 2 cut(s) | 1137, 1308 |
| BseXI | GCAGC | 2 cut(s) | 235, 1408 |
| BsgI | GTGCAG | 3 cut(s) | 359, 1415, 1438 |
| BshFI | GGCC | 1 cut(s) | 1459 |
| BshNI | GGYRCC | 1 cut(s) | 343 |
| BsiHKAI | GWGCWC | 2 cut(s) | 177, 1137 |
| BslFI | GGGAC | 1 cut(s) | 425 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 408 |
| BsmAI | GTCTC | 1 cut(s) | 1264 |
| BsmFI | GGGAC | 1 cut(s) | 425 |
| BsnI | GGCC | 1 cut(s) | 1459 |
| Bsp119I | TTCGAA | 1 cut(s) | 1191 |
| Bsp1286I | GDGCHC | 3 cut(s) | 177, 1137, 1308 |
| Bsp143I | GATC | 2 cut(s) | 415, 1086 |
| BspACI | CCGC | 1 cut(s) | 1277 |
| BspANI | GGCC | 1 cut(s) | 1459 |
| BspLI | GGNNCC | 2 cut(s) | 345, 392 |
| BspMI | ACCTGC | 1 cut(s) | 331 |
| BspT104I | TTCGAA | 1 cut(s) | 1191 |
| BspT107I | GGYRCC | 1 cut(s) | 343 |
| BsrDI | GCAATG | 1 cut(s) | 260 |
| BssECI | CCNNGG | 2 cut(s) | 153, 253 |
| BssMI | GATC | 2 cut(s) | 415, 1086 |
| BssT1I | CCWWGG | 1 cut(s) | 253 |
| Bst2UI | CCWGG | 1 cut(s) | 1069 |
| Bst4CI | ACNGT | 1 cut(s) | 472 |
| BstBI | TTCGAA | 1 cut(s) | 1191 |
| BstC8I | GCNNGC | 4 cut(s) | 511, 1120, 1133, 1275 |
| BstDEI | CTNAG | 3 cut(s) | 759, 894, 1202 |
| BstF5I | GGATG | 7 cut(s) | 139, 271, 886, 969, 1293, 1339, 1441 |
| BstH2I | RGCGCY | 1 cut(s) | 516 |
| BstHHI | GCGC | 1 cut(s) | 515 |
| BstKTI | GATC | 2 cut(s) | 418, 1089 |
| BstMAI | GTCTC | 1 cut(s) | 1264 |
| BstMBI | GATC | 2 cut(s) | 415, 1086 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 257, 1128 |
| BstNI | CCWGG | 1 cut(s) | 1069 |
| BstNSI | RCATGY | 1 cut(s) | 1122 |
| BstSCI | CCNGG | 1 cut(s) | 1067 |
| BstSLI | GKGCMC | 2 cut(s) | 1137, 1308 |
| BstV1I | GCAGC | 2 cut(s) | 235, 1408 |
| BsuRI | GGCC | 1 cut(s) | 1459 |
| BtgZI | GCGATG | 1 cut(s) | 959 |
| BtsCI | GGATG | 7 cut(s) | 139, 271, 886, 969, 1293, 1339, 1441 |
| BveI | ACCTGC | 1 cut(s) | 331 |
| Cac8I | GCNNGC | 4 cut(s) | 511, 1120, 1133, 1275 |
| CfoI | GCGC | 1 cut(s) | 515 |
| Csp6I | GTAC | 2 cut(s) | 119, 344 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1361, 1396 |
| CviAII | CATG | 9 cut(s) | 379, 491, 496, 533, 914, 1055, 1084, 1119, 1184 |
| CviQI | GTAC | 2 cut(s) | 119, 344 |
| DdeI | CTNAG | 3 cut(s) | 759, 894, 1202 |
| DpnI | GATC | 2 cut(s) | 417, 1088 |
| DpnII | GATC | 2 cut(s) | 415, 1086 |
| DraI | TTTAAA | 4 cut(s) | 31, 639, 652, 1519 |
| EaeI | YGGCCR | 1 cut(s) | 1457 |
| Eco130I | CCWWGG | 1 cut(s) | 253 |
| Eco47III | AGCGCT | 1 cut(s) | 514 |
| Eco57I | CTGAAG | 1 cut(s) | 920 |
| EcoRII | CCWGG | 1 cut(s) | 1067 |
| EcoT14I | CCWWGG | 1 cut(s) | 253 |
| EcoT22I | ATGCAT | 2 cut(s) | 139, 975 |
| ErhI | CCWWGG | 1 cut(s) | 253 |
| FaeI | CATG | 9 cut(s) | 382, 494, 499, 536, 917, 1058, 1087, 1122, 1187 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 887, 919 |
| FaqI | GGGAC | 1 cut(s) | 425 |
| FatI | CATG | 9 cut(s) | 378, 490, 495, 532, 913, 1054, 1083, 1118, 1183 |
| Fnu4HI | GCNGC | 3 cut(s) | 249, 1278, 1397 |
| FokI | GGATG | 7 cut(s) | 146, 258, 893, 976, 1300, 1346, 1448 |
| Fsp4HI | GCNGC | 3 cut(s) | 249, 1278, 1397 |
| FspBI | CTAG | 7 cut(s) | 141, 222, 254, 276, 563, 947, 1095 |
| GlaI | GCGC | 1 cut(s) | 514 |
| GluI | GCNGC | 3 cut(s) | 249, 1278, 1397 |
| GsuI | CTGGAG | 1 cut(s) | 1433 |
| HaeII | RGCGCY | 1 cut(s) | 516 |
| HaeIII | GGCC | 1 cut(s) | 1459 |
| HhaI | GCGC | 1 cut(s) | 515 |
| Hin1II | CATG | 9 cut(s) | 382, 494, 499, 536, 917, 1058, 1087, 1122, 1187 |
| Hin6I | GCGC | 1 cut(s) | 513 |
| HinP1I | GCGC | 1 cut(s) | 513 |
| HinfI | GANTC | 9 cut(s) | 41, 696, 809, 872, 950, 996, 1072, 1253, 1551 |
| HphI | GGTGA | 1 cut(s) | 26 |
| Hpy166II | GTNNAC | 3 cut(s) | 690, 743, 1135 |
| Hpy188I | TCNGA | 3 cut(s) | 40, 939, 1556 |
| Hpy188III | TCNNGA | 4 cut(s) | 127, 141, 1090, 1412 |
| Hpy8I | GTNNAC | 3 cut(s) | 690, 743, 1135 |
| HpyAV | CCTTC | 7 cut(s) | 124, 152, 339, 791, 944, 1112, 1381 |
| HpyCH4III | ACNGT | 1 cut(s) | 472 |
| HpyCH4IV | ACGT | 2 cut(s) | 501, 1004 |
| HpyCH4V | TGCA | 9 cut(s) | 137, 340, 926, 973, 1122, 1135, 1396, 1419, 1546 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 257, 1128 |
| HpyF3I | CTNAG | 3 cut(s) | 759, 894, 1202 |
| HpySE526I | ACGT | 2 cut(s) | 501, 1004 |
| Hsp92II | CATG | 9 cut(s) | 382, 494, 499, 536, 917, 1058, 1087, 1122, 1187 |
| HspAI | GCGC | 1 cut(s) | 513 |
| KpnI | GGTACC | 1 cut(s) | 347 |
| Kzo9I | GATC | 2 cut(s) | 415, 1086 |
| LmnI | GCTCC | 4 cut(s) | 172, 369, 463, 571 |
| LpnPI | CCDG | 8 cut(s) | 326, 394, 588, 1054, 1081, 1287, 1385, 1397 |
| Lsp1109I | GCAGC | 2 cut(s) | 235, 1408 |
| LweI | GCATC | 5 cut(s) | 124, 146, 591, 982, 1033 |
| MaeI | CTAG | 7 cut(s) | 141, 222, 254, 276, 563, 947, 1095 |
| MaeII | ACGT | 2 cut(s) | 501, 1004 |
| MaeIII | GTNAC | 6 cut(s) | 324, 605, 614, 806, 1040, 1090 |
| MalI | GATC | 2 cut(s) | 417, 1088 |
| MboI | GATC | 2 cut(s) | 415, 1086 |
| MboII | GAAGA | 2 cut(s) | 895, 1396 |
| MfeI | CAATTG | 2 cut(s) | 765, 1244 |
| MhlI | GDGCHC | 3 cut(s) | 177, 1137, 1308 |
| MlyI | GAGTC | 2 cut(s) | 690, 803 |
| MmeI | TCCRAC | 1 cut(s) | 1330 |
| MnlI | CCTC | 7 cut(s) | 148, 437, 469, 497, 517, 539, 1370 |
| Mph1103I | ATGCAT | 2 cut(s) | 139, 975 |
| MslI | CAYNNNNRTG | 2 cut(s) | 377, 1088 |
| MspA1I | CMGCKG | 1 cut(s) | 1399 |
| MspR9I | CCNGG | 1 cut(s) | 1069 |
| MunI | CAATTG | 2 cut(s) | 765, 1244 |
| MvaI | CCWGG | 1 cut(s) | 1069 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 257, 1128 |
| NdeII | GATC | 2 cut(s) | 415, 1086 |
| NlaIII | CATG | 9 cut(s) | 382, 494, 499, 536, 917, 1058, 1087, 1122, 1187 |
| NlaIV | GGNNCC | 2 cut(s) | 345, 392 |
| NmuCI | GTSAC | 3 cut(s) | 614, 806, 1090 |
| NsiI | ATGCAT | 2 cut(s) | 139, 975 |
| NspI | RCATGY | 1 cut(s) | 1122 |
| NspV | TTCGAA | 1 cut(s) | 1191 |
| PaeI | GCATGC | 1 cut(s) | 1122 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1095 |
| PfeI | GAWTC | 7 cut(s) | 41, 872, 950, 996, 1072, 1253, 1551 |
| PkrI | GCNGC | 3 cut(s) | 250, 1279, 1398 |
| PleI | GAGTC | 2 cut(s) | 690, 803 |
| PpsI | GAGTC | 2 cut(s) | 690, 803 |
| Psp1406I | AACGTT | 1 cut(s) | 501 |
| Psp6I | CCWGG | 1 cut(s) | 1067 |
| PspGI | CCWGG | 1 cut(s) | 1067 |
| PspN4I | GGNNCC | 2 cut(s) | 345, 392 |
| PvuII | CAGCTG | 1 cut(s) | 1399 |
| RsaI | GTAC | 2 cut(s) | 120, 345 |
| RsaNI | GTAC | 2 cut(s) | 119, 344 |
| RseI | CAYNNNNRTG | 2 cut(s) | 377, 1088 |
| SatI | GCNGC | 3 cut(s) | 249, 1278, 1397 |
| Sau3AI | GATC | 2 cut(s) | 415, 1086 |
| SchI | GAGTC | 2 cut(s) | 690, 803 |
| ScrFI | CCNGG | 1 cut(s) | 1069 |
| SduI | GDGCHC | 3 cut(s) | 177, 1137, 1308 |
| SfaNI | GCATC | 5 cut(s) | 124, 146, 591, 982, 1033 |
| SfuI | TTCGAA | 1 cut(s) | 1191 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 377, 1088 |
| SphI | GCATGC | 1 cut(s) | 1122 |
| SsiI | CCGC | 1 cut(s) | 1277 |
| SspMI | CTAG | 7 cut(s) | 141, 222, 254, 276, 563, 947, 1095 |
| StyD4I | CCNGG | 1 cut(s) | 1067 |
| StyI | CCWWGG | 1 cut(s) | 253 |
| TaaI | ACNGT | 1 cut(s) | 472 |
| TaiI | ACGT | 2 cut(s) | 504, 1007 |
| TaqI | TCGA | 3 cut(s) | 1027, 1191, 1369 |
| TauI | GCSGC | 1 cut(s) | 1280 |
| TfiI | GAWTC | 7 cut(s) | 41, 872, 950, 996, 1072, 1253, 1551 |
| TseFI | GTSAC | 3 cut(s) | 614, 806, 1090 |
| TseI | GCWGC | 2 cut(s) | 248, 1396 |
| Tsp45I | GTSAC | 3 cut(s) | 614, 806, 1090 |
| TspDTI | ATGAA | 7 cut(s) | 424, 512, 885, 930, 980, 1062, 1452 |
| VneI | GTGCAC | 1 cut(s) | 1133 |
| XapI | RAATTY | 5 cut(s) | 97, 454, 791, 1214, 1514 |
| XbaI | TCTAGA | 1 cut(s) | 140 |
| XceI | RCATGY | 1 cut(s) | 1122 |
| XmaJI | CCTAGG | 1 cut(s) | 253 |
| XspI | CTAG | 7 cut(s) | 141, 222, 254, 276, 563, 947, 1095 |
| Zsp2I | ATGCAT | 2 cut(s) | 139, 975 |