Retrotransposon gag protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 150 |
| AclI | AACGTT | 2 cut(s) | 160, 243 |
| AclWI | GGATC | 1 cut(s) | 167 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 260 |
| AgsI | TTSAA | 1 cut(s) | 165 |
| AjnI | CCWGG | 1 cut(s) | 196 |
| AluBI | AGCT | 1 cut(s) | 38 |
| AluI | AGCT | 1 cut(s) | 38 |
| Alw21I | GWGCWC | 2 cut(s) | 20, 53 |
| AlwI | GGATC | 1 cut(s) | 167 |
| AoxI | GGCC | 1 cut(s) | 296 |
| AspS9I | GGNCC | 4 cut(s) | 152, 208, 228, 304 |
| AvaII | GGWCC | 4 cut(s) | 152, 208, 228, 304 |
| AxyI | CCTNAGG | 1 cut(s) | 300 |
| BaeGI | GKGCMC | 1 cut(s) | 66 |
| Bbv12I | GWGCWC | 2 cut(s) | 20, 53 |
| BccI | CCATC | 2 cut(s) | 99, 195 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 23, 57 |
| BciT130I | CCWGG | 1 cut(s) | 198 |
| BciVI | GTATCC | 1 cut(s) | 125 |
| BfmI | CTRYAG | 1 cut(s) | 123 |
| BfuI | GTATCC | 1 cut(s) | 125 |
| Bme1390I | CCNGG | 1 cut(s) | 198 |
| Bme18I | GGWCC | 4 cut(s) | 152, 208, 228, 304 |
| BmgT120I | GGNCC | 4 cut(s) | 152, 208, 228, 304 |
| BmiI | GGNNCC | 3 cut(s) | 154, 209, 306 |
| BmrFI | CCNGG | 1 cut(s) | 198 |
| BpuEI | CTTGAG | 1 cut(s) | 264 |
| BsaJI | CCNNGG | 3 cut(s) | 21, 136, 196 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 260 |
| Bse21I | CCTNAGG | 1 cut(s) | 300 |
| BseBI | CCWGG | 1 cut(s) | 198 |
| BseDI | CCNNGG | 3 cut(s) | 21, 136, 196 |
| BseGI | GGATG | 2 cut(s) | 110, 206 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 260 |
| BseSI | GKGCMC | 1 cut(s) | 66 |
| BshFI | GGCC | 1 cut(s) | 298 |
| BsiHKAI | GWGCWC | 2 cut(s) | 20, 53 |
| BslFI | GGGAC | 4 cut(s) | 39, 138, 221, 290 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 260 |
| BsmFI | GGGAC | 4 cut(s) | 39, 138, 221, 290 |
| BsnI | GGCC | 1 cut(s) | 298 |
| Bsp1286I | GDGCHC | 3 cut(s) | 20, 53, 66 |
| Bsp143I | GATC | 1 cut(s) | 172 |
| BspACI | CCGC | 1 cut(s) | 150 |
| BspANI | GGCC | 1 cut(s) | 298 |
| BspLI | GGNNCC | 3 cut(s) | 154, 209, 306 |
| BspPI | GGATC | 1 cut(s) | 167 |
| BssECI | CCNNGG | 3 cut(s) | 21, 136, 196 |
| BssMI | GATC | 1 cut(s) | 172 |
| BssT1I | CCWWGG | 2 cut(s) | 21, 136 |
| Bst2UI | CCWGG | 1 cut(s) | 198 |
| BstC8I | GCNNGC | 1 cut(s) | 36 |
| BstDEI | CTNAG | 1 cut(s) | 300 |
| BstF5I | GGATG | 2 cut(s) | 110, 206 |
| BstKTI | GATC | 1 cut(s) | 175 |
| BstMBI | GATC | 1 cut(s) | 172 |
| BstNI | CCWGG | 1 cut(s) | 198 |
| BstSCI | CCNGG | 1 cut(s) | 196 |
| BstSFI | CTRYAG | 1 cut(s) | 123 |
| BstSLI | GKGCMC | 1 cut(s) | 66 |
| Bsu36I | CCTNAGG | 1 cut(s) | 300 |
| BsuI | GTATCC | 1 cut(s) | 125 |
| BsuRI | GGCC | 1 cut(s) | 298 |
| BtsCI | GGATG | 2 cut(s) | 110, 206 |
| Cac8I | GCNNGC | 1 cut(s) | 36 |
| Cfr13I | GGNCC | 4 cut(s) | 152, 208, 228, 304 |
| CviAII | CATG | 1 cut(s) | 67 |
| CviJI | RGCY | 3 cut(s) | 38, 285, 298 |
| CviKI_1 | RGCY | 3 cut(s) | 38, 285, 298 |
| DdeI | CTNAG | 1 cut(s) | 300 |
| DpnI | GATC | 1 cut(s) | 174 |
| DpnII | GATC | 1 cut(s) | 172 |
| Eco130I | CCWWGG | 2 cut(s) | 21, 136 |
| Eco147I | AGGCCT | 1 cut(s) | 298 |
| Eco47I | GGWCC | 4 cut(s) | 152, 208, 228, 304 |
| Eco81I | CCTNAGG | 1 cut(s) | 300 |
| EcoO109I | RGGNCCY | 1 cut(s) | 304 |
| EcoRII | CCWGG | 1 cut(s) | 196 |
| EcoT14I | CCWWGG | 2 cut(s) | 21, 136 |
| ErhI | CCWWGG | 2 cut(s) | 21, 136 |
| FaeI | CATG | 1 cut(s) | 70 |
| FaiI | YATR | 4 cut(s) | 56, 68, 125, 171 |
| FaqI | GGGAC | 4 cut(s) | 39, 138, 221, 290 |
| FatI | CATG | 1 cut(s) | 66 |
| FokI | GGATG | 2 cut(s) | 117, 213 |
| HaeIII | GGCC | 1 cut(s) | 298 |
| Hin1II | CATG | 1 cut(s) | 70 |
| HindIII | AAGCTT | 1 cut(s) | 36 |
| HinfI | GANTC | 1 cut(s) | 110 |
| Hpy166II | GTNNAC | 1 cut(s) | 228 |
| Hpy188I | TCNGA | 2 cut(s) | 249, 294 |
| Hpy8I | GTNNAC | 1 cut(s) | 228 |
| HpyCH4IV | ACGT | 3 cut(s) | 160, 243, 274 |
| HpyCH4V | TGCA | 3 cut(s) | 34, 58, 222 |
| HpyF3I | CTNAG | 1 cut(s) | 300 |
| HpySE526I | ACGT | 3 cut(s) | 160, 243, 274 |
| Hsp92II | CATG | 1 cut(s) | 70 |
| Kzo9I | GATC | 1 cut(s) | 172 |
| LpnPI | CCDG | 3 cut(s) | 183, 210, 287 |
| MaeII | ACGT | 3 cut(s) | 160, 243, 274 |
| MalI | GATC | 1 cut(s) | 174 |
| MboI | GATC | 1 cut(s) | 172 |
| MhlI | GDGCHC | 3 cut(s) | 20, 53, 66 |
| MlyI | GAGTC | 1 cut(s) | 119 |
| MmeI | TCCRAC | 1 cut(s) | 295 |
| MnlI | CCTC | 7 cut(s) | 95, 122, 198, 264, 288, 288, 309 |
| MseI | TTAA | 1 cut(s) | 310 |
| MspR9I | CCNGG | 1 cut(s) | 198 |
| MvaI | CCWGG | 1 cut(s) | 198 |
| NdeII | GATC | 1 cut(s) | 172 |
| NlaIII | CATG | 1 cut(s) | 70 |
| NlaIV | GGNNCC | 3 cut(s) | 154, 209, 306 |
| PceI | AGGCCT | 1 cut(s) | 298 |
| PleI | GAGTC | 1 cut(s) | 118 |
| PpsI | GAGTC | 1 cut(s) | 118 |
| PpuMI | RGGWCCY | 1 cut(s) | 304 |
| Psp1406I | AACGTT | 2 cut(s) | 160, 243 |
| Psp5II | RGGWCCY | 1 cut(s) | 304 |
| Psp6I | CCWGG | 1 cut(s) | 196 |
| PspGI | CCWGG | 1 cut(s) | 196 |
| PspN4I | GGNNCC | 3 cut(s) | 154, 209, 306 |
| PspPI | GGNCC | 4 cut(s) | 152, 208, 228, 304 |
| PspPPI | RGGWCCY | 1 cut(s) | 304 |
| SaqAI | TTAA | 1 cut(s) | 310 |
| Sau3AI | GATC | 1 cut(s) | 172 |
| Sau96I | GGNCC | 4 cut(s) | 152, 208, 228, 304 |
| SchI | GAGTC | 1 cut(s) | 119 |
| ScrFI | CCNGG | 1 cut(s) | 198 |
| SduI | GDGCHC | 3 cut(s) | 20, 53, 66 |
| SetI | ASST | 7 cut(s) | 40, 163, 170, 191, 246, 277, 306 |
| SfcI | CTRYAG | 1 cut(s) | 123 |
| SinI | GGWCC | 4 cut(s) | 152, 208, 228, 304 |
| SmlI | CTYRAG | 1 cut(s) | 279 |
| SmoI | CTYRAG | 1 cut(s) | 279 |
| SseBI | AGGCCT | 1 cut(s) | 298 |
| SsiI | CCGC | 1 cut(s) | 150 |
| StuI | AGGCCT | 1 cut(s) | 298 |
| StyD4I | CCNGG | 1 cut(s) | 196 |
| StyI | CCWWGG | 2 cut(s) | 21, 136 |
| TaiI | ACGT | 3 cut(s) | 163, 246, 277 |
| Tru1I | TTAA | 1 cut(s) | 310 |
| Tru9I | TTAA | 1 cut(s) | 310 |
| VpaK11BI | GGWCC | 4 cut(s) | 152, 208, 228, 304 |