Aspartyl protease
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Integrase_H2C2 | PF17921 | 25 - 82 | 4.6e-11 | Integrase zinc binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 732 |
| AccB1I | GGYRCC | 2 cut(s) | 140, 234 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 118, 244 |
| AccII | CGCG | 5 cut(s) | 849, 863, 865, 867, 878 |
| AclWI | GGATC | 1 cut(s) | 743 |
| AcoI | YGGCCR | 1 cut(s) | 754 |
| AcsI | RAATTY | 1 cut(s) | 442 |
| AcyI | GRCGYC | 1 cut(s) | 729 |
| AfaI | GTAC | 2 cut(s) | 623, 708 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 118, 244 |
| AgsI | TTSAA | 5 cut(s) | 199, 280, 401, 442, 665 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 272, 304 |
| AluBI | AGCT | 5 cut(s) | 493, 517, 568, 668, 762 |
| AluI | AGCT | 5 cut(s) | 493, 517, 568, 668, 762 |
| AlwI | GGATC | 1 cut(s) | 743 |
| AoxI | GGCC | 3 cut(s) | 130, 185, 754 |
| ApeKI | GCWGC | 1 cut(s) | 873 |
| ApoI | RAATTY | 1 cut(s) | 442 |
| AspLEI | GCGC | 3 cut(s) | 865, 867, 878 |
| AspS9I | GGNCC | 2 cut(s) | 332, 688 |
| AvaII | GGWCC | 2 cut(s) | 332, 688 |
| BanI | GGYRCC | 2 cut(s) | 140, 234 |
| BbsI | GAAGAC | 1 cut(s) | 864 |
| BccI | CCATC | 2 cut(s) | 349, 829 |
| BciVI | GTATCC | 2 cut(s) | 397, 458 |
| BclI | TGATCA | 2 cut(s) | 52, 424 |
| BfaI | CTAG | 1 cut(s) | 644 |
| BfuI | GTATCC | 2 cut(s) | 397, 458 |
| BisI | GCNGC | 1 cut(s) | 874 |
| BlsI | GCNGC | 1 cut(s) | 875 |
| BmcAI | AGTACT | 1 cut(s) | 708 |
| Bme18I | GGWCC | 2 cut(s) | 332, 688 |
| BmgT120I | GGNCC | 2 cut(s) | 332, 688 |
| BmiI | GGNNCC | 5 cut(s) | 142, 236, 333, 690, 698 |
| BmsI | GCATC | 4 cut(s) | 105, 193, 261, 463 |
| BpiI | GAAGAC | 1 cut(s) | 864 |
| Bsa29I | ATCGAT | 1 cut(s) | 321 |
| BsaAI | YACGTR | 1 cut(s) | 385 |
| BsaHI | GRCGYC | 1 cut(s) | 729 |
| BsaJI | CCNNGG | 2 cut(s) | 692, 700 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 808, 838 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 118, 244 |
| Bse1I | ACTGG | 1 cut(s) | 836 |
| Bse3DI | GCAATG | 1 cut(s) | 405 |
| BseCI | ATCGAT | 1 cut(s) | 321 |
| BseDI | CCNNGG | 2 cut(s) | 692, 700 |
| BseGI | GGATG | 2 cut(s) | 341, 478 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 118, 244 |
| BseMI | GCAATG | 1 cut(s) | 405 |
| BseNI | ACTGG | 1 cut(s) | 836 |
| BsePI | GCGCGC | 1 cut(s) | 863 |
| Bsh1236I | CGCG | 5 cut(s) | 849, 863, 865, 867, 878 |
| BshFI | GGCC | 3 cut(s) | 132, 187, 756 |
| BshNI | GGYRCC | 2 cut(s) | 140, 234 |
| BshVI | ATCGAT | 1 cut(s) | 321 |
| BsiSI | CCGG | 5 cut(s) | 757, 778, 810, 827, 841 |
| BslFI | GGGAC | 4 cut(s) | 35, 59, 345, 674 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 118, 244 |
| BsmFI | GGGAC | 4 cut(s) | 35, 59, 345, 674 |
| BsmI | GAATGC | 1 cut(s) | 544 |
| BsnI | GGCC | 3 cut(s) | 132, 187, 756 |
| Bsp143I | GATC | 3 cut(s) | 52, 424, 735 |
| BspANI | GGCC | 3 cut(s) | 132, 187, 756 |
| BspDI | ATCGAT | 1 cut(s) | 321 |
| BspFNI | CGCG | 5 cut(s) | 849, 863, 865, 867, 878 |
| BspHI | TCATGA | 1 cut(s) | 574 |
| BspLI | GGNNCC | 5 cut(s) | 142, 236, 333, 690, 698 |
| BspPI | GGATC | 1 cut(s) | 743 |
| BspQI | GCTCTTC | 1 cut(s) | 507 |
| BspT107I | GGYRCC | 2 cut(s) | 140, 234 |
| BsrDI | GCAATG | 1 cut(s) | 405 |
| BsrI | ACTGG | 1 cut(s) | 836 |
| BssECI | CCNNGG | 2 cut(s) | 692, 700 |
| BssHII | GCGCGC | 1 cut(s) | 863 |
| BssMI | GATC | 3 cut(s) | 52, 424, 735 |
| BssNI | GRCGYC | 1 cut(s) | 729 |
| BssT1I | CCWWGG | 1 cut(s) | 692 |
| Bst4CI | ACNGT | 2 cut(s) | 626, 791 |
| Bst6I | CTCTTC | 1 cut(s) | 507 |
| BstACI | GRCGYC | 1 cut(s) | 729 |
| BstBAI | YACGTR | 1 cut(s) | 385 |
| BstC8I | GCNNGC | 1 cut(s) | 865 |
| BstDEI | CTNAG | 4 cut(s) | 222, 518, 564, 680 |
| BstF5I | GGATG | 2 cut(s) | 341, 478 |
| BstFNI | CGCG | 5 cut(s) | 849, 863, 865, 867, 878 |
| BstHHI | GCGC | 3 cut(s) | 865, 867, 878 |
| BstKTI | GATC | 3 cut(s) | 55, 427, 738 |
| BstMBI | GATC | 3 cut(s) | 52, 424, 735 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 482, 768, 873 |
| BstNSI | RCATGY | 1 cut(s) | 126 |
| BstSNI | TACGTA | 1 cut(s) | 385 |
| BstUI | CGCG | 5 cut(s) | 849, 863, 865, 867, 878 |
| BstV2I | GAAGAC | 1 cut(s) | 864 |
| Bsu15I | ATCGAT | 1 cut(s) | 321 |
| BsuI | GTATCC | 2 cut(s) | 397, 458 |
| BsuRI | GGCC | 3 cut(s) | 132, 187, 756 |
| BsuTUI | ATCGAT | 1 cut(s) | 321 |
| BtsCI | GGATG | 2 cut(s) | 341, 478 |
| BtsI | GCAGTG | 1 cut(s) | 381 |
| BtsIMutI | CAGTG | 2 cut(s) | 381, 796 |
| Cac8I | GCNNGC | 1 cut(s) | 865 |
| CciI | TCATGA | 1 cut(s) | 574 |
| CfoI | GCGC | 3 cut(s) | 865, 867, 878 |
| Cfr13I | GGNCC | 2 cut(s) | 332, 688 |
| ClaI | ATCGAT | 1 cut(s) | 321 |
| CseI | GACGC | 2 cut(s) | 855, 869 |
| Csp6I | GTAC | 2 cut(s) | 622, 707 |
| CviAII | CATG | 5 cut(s) | 123, 328, 575, 594, 630 |
| CviQI | GTAC | 2 cut(s) | 622, 707 |
| DdeI | CTNAG | 4 cut(s) | 222, 518, 564, 680 |
| DpnI | GATC | 3 cut(s) | 54, 426, 737 |
| DpnII | GATC | 3 cut(s) | 52, 424, 735 |
| DraI | TTTAAA | 1 cut(s) | 40 |
| EaeI | YGGCCR | 1 cut(s) | 754 |
| Eam1104I | CTCTTC | 1 cut(s) | 507 |
| EarI | CTCTTC | 1 cut(s) | 507 |
| Eco105I | TACGTA | 1 cut(s) | 385 |
| Eco130I | CCWWGG | 1 cut(s) | 692 |
| Eco47I | GGWCC | 2 cut(s) | 332, 688 |
| EcoO109I | RGGNCCY | 1 cut(s) | 688 |
| EcoT14I | CCWWGG | 1 cut(s) | 692 |
| ErhI | CCWWGG | 1 cut(s) | 692 |
| FaeI | CATG | 5 cut(s) | 126, 331, 578, 597, 633 |
| FaqI | GGGAC | 4 cut(s) | 35, 59, 345, 674 |
| FatI | CATG | 5 cut(s) | 122, 327, 574, 593, 629 |
| FauNDI | CATATG | 1 cut(s) | 532 |
| FbaI | TGATCA | 2 cut(s) | 52, 424 |
| Fnu4HI | GCNGC | 1 cut(s) | 874 |
| FokI | GGATG | 2 cut(s) | 328, 485 |
| Fsp4HI | GCNGC | 1 cut(s) | 874 |
| FspBI | CTAG | 1 cut(s) | 644 |
| GlaI | GCGC | 3 cut(s) | 864, 866, 877 |
| GluI | GCNGC | 1 cut(s) | 874 |
| HaeIII | GGCC | 3 cut(s) | 132, 187, 756 |
| HapII | CCGG | 5 cut(s) | 757, 778, 810, 827, 841 |
| HgaI | GACGC | 2 cut(s) | 855, 869 |
| HhaI | GCGC | 3 cut(s) | 865, 867, 878 |
| Hin1I | GRCGYC | 1 cut(s) | 729 |
| Hin1II | CATG | 5 cut(s) | 126, 331, 578, 597, 633 |
| Hin6I | GCGC | 3 cut(s) | 863, 865, 876 |
| HinP1I | GCGC | 3 cut(s) | 863, 865, 876 |
| HindIII | AAGCTT | 1 cut(s) | 666 |
| HinfI | GANTC | 2 cut(s) | 318, 600 |
| HpaII | CCGG | 5 cut(s) | 757, 778, 810, 827, 841 |
| Hpy188I | TCNGA | 2 cut(s) | 614, 704 |
| Hpy188III | TCNNGA | 2 cut(s) | 575, 733 |
| Hpy99I | CGWCG | 2 cut(s) | 734, 849 |
| HpyAV | CCTTC | 1 cut(s) | 594 |
| HpyCH4III | ACNGT | 2 cut(s) | 626, 791 |
| HpyCH4IV | ACGT | 3 cut(s) | 15, 384, 729 |
| HpyCH4V | TGCA | 1 cut(s) | 633 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 482, 768, 873 |
| HpyF3I | CTNAG | 4 cut(s) | 222, 518, 564, 680 |
| HpySE526I | ACGT | 3 cut(s) | 15, 384, 729 |
| Hsp92I | GRCGYC | 1 cut(s) | 729 |
| Hsp92II | CATG | 5 cut(s) | 126, 331, 578, 597, 633 |
| HspAI | GCGC | 3 cut(s) | 863, 865, 876 |
| Ksp22I | TGATCA | 2 cut(s) | 52, 424 |
| Kzo9I | GATC | 3 cut(s) | 52, 424, 735 |
| LguI | GCTCTTC | 1 cut(s) | 507 |
| LmnI | GCTCC | 3 cut(s) | 498, 696, 759 |
| LweI | GCATC | 4 cut(s) | 105, 193, 261, 463 |
| MaeI | CTAG | 1 cut(s) | 644 |
| MaeII | ACGT | 3 cut(s) | 15, 384, 729 |
| MalI | GATC | 3 cut(s) | 54, 426, 737 |
| MauBI | CGCGCGCG | 1 cut(s) | 863 |
| MboI | GATC | 3 cut(s) | 52, 424, 735 |
| MboII | GAAGA | 4 cut(s) | 273, 524, 866, 869 |
| MluCI | AATT | 1 cut(s) | 442 |
| MmeI | TCCRAC | 3 cut(s) | 489, 520, 695 |
| MnlI | CCTC | 7 cut(s) | 122, 355, 520, 598, 679, 710, 844 |
| MseI | TTAA | 4 cut(s) | 39, 450, 501, 639 |
| MslI | CAYNNNNRTG | 4 cut(s) | 121, 138, 290, 368 |
| MspI | CCGG | 5 cut(s) | 757, 778, 810, 827, 841 |
| Mva1269I | GAATGC | 1 cut(s) | 544 |
| MvnI | CGCG | 5 cut(s) | 849, 863, 865, 867, 878 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 482, 768, 873 |
| NdeI | CATATG | 1 cut(s) | 532 |
| NdeII | GATC | 3 cut(s) | 52, 424, 735 |
| NlaIII | CATG | 5 cut(s) | 126, 331, 578, 597, 633 |
| NlaIV | GGNNCC | 5 cut(s) | 142, 236, 333, 690, 698 |
| NspI | RCATGY | 1 cut(s) | 126 |
| PagI | TCATGA | 1 cut(s) | 574 |
| PauI | GCGCGC | 1 cut(s) | 863 |
| PciSI | GCTCTTC | 1 cut(s) | 507 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 21, 738 |
| PctI | GAATGC | 1 cut(s) | 544 |
| PfeI | GAWTC | 2 cut(s) | 318, 600 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 118, 244 |
| PkrI | GCNGC | 1 cut(s) | 875 |
| Ppu21I | YACGTR | 1 cut(s) | 385 |
| PpuMI | RGGWCCY | 1 cut(s) | 688 |
| Psp5II | RGGWCCY | 1 cut(s) | 688 |
| PspN4I | GGNNCC | 5 cut(s) | 142, 236, 333, 690, 698 |
| PspPI | GGNCC | 2 cut(s) | 332, 688 |
| PspPPI | RGGWCCY | 1 cut(s) | 688 |
| PteI | GCGCGC | 1 cut(s) | 863 |
| RsaI | GTAC | 2 cut(s) | 623, 708 |
| RsaNI | GTAC | 2 cut(s) | 622, 707 |
| RseI | CAYNNNNRTG | 4 cut(s) | 121, 138, 290, 368 |
| SapI | GCTCTTC | 1 cut(s) | 507 |
| SaqAI | TTAA | 4 cut(s) | 39, 450, 501, 639 |
| SatI | GCNGC | 1 cut(s) | 874 |
| Sau3AI | GATC | 3 cut(s) | 52, 424, 735 |
| Sau96I | GGNCC | 2 cut(s) | 332, 688 |
| ScaI | AGTACT | 1 cut(s) | 708 |
| SfaNI | GCATC | 4 cut(s) | 105, 193, 261, 463 |
| SinI | GGWCC | 2 cut(s) | 332, 688 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 121, 138, 290, 368 |
| SnaBI | TACGTA | 1 cut(s) | 385 |
| Sse9I | AATT | 1 cut(s) | 442 |
| SspI | AATATT | 1 cut(s) | 44 |
| SspMI | CTAG | 1 cut(s) | 644 |
| StyI | CCWWGG | 1 cut(s) | 692 |
| TaaI | ACNGT | 2 cut(s) | 626, 791 |
| TaiI | ACGT | 3 cut(s) | 18, 387, 732 |
| TaqI | TCGA | 3 cut(s) | 321, 598, 603 |
| TasI | AATT | 1 cut(s) | 442 |
| TatI | WGTACW | 1 cut(s) | 706 |
| TfiI | GAWTC | 2 cut(s) | 318, 600 |
| Tru1I | TTAA | 4 cut(s) | 39, 450, 501, 639 |
| Tru9I | TTAA | 4 cut(s) | 39, 450, 501, 639 |
| TscAI | CASTG | 2 cut(s) | 381, 796 |
| TseI | GCWGC | 1 cut(s) | 873 |
| TspDTI | ATGAA | 3 cut(s) | 316, 582, 618 |
| TspGWI | ACGGA | 1 cut(s) | 574 |
| TspRI | CASTG | 2 cut(s) | 381, 796 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 118, 244 |
| VpaK11BI | GGWCC | 2 cut(s) | 332, 688 |
| XapI | RAATTY | 1 cut(s) | 442 |
| XceI | RCATGY | 1 cut(s) | 126 |
| XspI | CTAG | 1 cut(s) | 644 |
| ZraI | GACGTC | 1 cut(s) | 730 |
| ZrmI | AGTACT | 1 cut(s) | 708 |