transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 57 |
| AciI | CCGC | 2 cut(s) | 485, 571 |
| AclWI | GGATC | 1 cut(s) | 248 |
| AcsI | RAATTY | 3 cut(s) | 19, 611, 655 |
| AfaI | GTAC | 1 cut(s) | 459 |
| AgsI | TTSAA | 5 cut(s) | 130, 180, 302, 404, 636 |
| AjnI | CCWGG | 1 cut(s) | 195 |
| AluBI | AGCT | 2 cut(s) | 155, 379 |
| AluI | AGCT | 2 cut(s) | 155, 379 |
| Alw26I | GTCTC | 1 cut(s) | 217 |
| AlwI | GGATC | 1 cut(s) | 248 |
| AoxI | GGCC | 1 cut(s) | 551 |
| ApoI | RAATTY | 3 cut(s) | 19, 611, 655 |
| AseI | ATTAAT | 1 cut(s) | 333 |
| AspS9I | GGNCC | 1 cut(s) | 193 |
| AsuC2I | CCSGG | 1 cut(s) | 258 |
| AsuHPI | GGTGA | 2 cut(s) | 386, 507 |
| AvaII | GGWCC | 1 cut(s) | 193 |
| AxyI | CCTNAGG | 2 cut(s) | 6, 662 |
| BaeGI | GKGCMC | 1 cut(s) | 57 |
| BccI | CCATC | 3 cut(s) | 383, 601, 611 |
| BciT130I | CCWGG | 1 cut(s) | 197 |
| BcnI | CCSGG | 1 cut(s) | 258 |
| BcoDI | GTCTC | 1 cut(s) | 217 |
| BfaI | CTAG | 1 cut(s) | 63 |
| BfuAI | ACCTGC | 1 cut(s) | 57 |
| Bme1390I | CCNGG | 2 cut(s) | 197, 258 |
| Bme18I | GGWCC | 1 cut(s) | 193 |
| BmgT120I | GGNCC | 1 cut(s) | 193 |
| BmrFI | CCNGG | 2 cut(s) | 197, 258 |
| BmsI | GCATC | 1 cut(s) | 368 |
| BpuMI | CCSGG | 1 cut(s) | 258 |
| BsaAI | YACGTR | 1 cut(s) | 496 |
| BsaBI | GATNNNNATC | 1 cut(s) | 635 |
| Bse21I | CCTNAGG | 2 cut(s) | 6, 662 |
| Bse8I | GATNNNNATC | 1 cut(s) | 635 |
| BseBI | CCWGG | 1 cut(s) | 197 |
| BseJI | GATNNNNATC | 1 cut(s) | 635 |
| BseRI | GAGGAG | 1 cut(s) | 104 |
| BseSI | GKGCMC | 1 cut(s) | 57 |
| Bsh1285I | CGRYCG | 1 cut(s) | 415 |
| BshFI | GGCC | 1 cut(s) | 553 |
| BsiEI | CGRYCG | 1 cut(s) | 415 |
| BsiSI | CCGG | 1 cut(s) | 257 |
| BsmAI | GTCTC | 1 cut(s) | 217 |
| BsnI | GGCC | 1 cut(s) | 553 |
| Bsp1286I | GDGCHC | 1 cut(s) | 57 |
| Bsp143I | GATC | 3 cut(s) | 253, 412, 669 |
| BspACI | CCGC | 2 cut(s) | 485, 571 |
| BspANI | GGCC | 1 cut(s) | 553 |
| BspHI | TCATGA | 1 cut(s) | 558 |
| BspMI | ACCTGC | 1 cut(s) | 57 |
| BspPI | GGATC | 1 cut(s) | 248 |
| BssMI | GATC | 3 cut(s) | 253, 412, 669 |
| Bst2UI | CCWGG | 1 cut(s) | 197 |
| Bst6I | CTCTTC | 1 cut(s) | 164 |
| BstBAI | YACGTR | 1 cut(s) | 496 |
| BstC8I | GCNNGC | 1 cut(s) | 571 |
| BstDEI | CTNAG | 5 cut(s) | 6, 294, 319, 370, 662 |
| BstKTI | GATC | 3 cut(s) | 256, 415, 672 |
| BstMAI | GTCTC | 1 cut(s) | 217 |
| BstMBI | GATC | 3 cut(s) | 253, 412, 669 |
| BstMCI | CGRYCG | 1 cut(s) | 415 |
| BstNI | CCWGG | 1 cut(s) | 197 |
| BstNSI | RCATGY | 1 cut(s) | 313 |
| BstSCI | CCNGG | 2 cut(s) | 195, 256 |
| BstSLI | GKGCMC | 1 cut(s) | 57 |
| BstX2I | RGATCY | 1 cut(s) | 253 |
| BstYI | RGATCY | 1 cut(s) | 253 |
| Bsu36I | CCTNAGG | 2 cut(s) | 6, 662 |
| BsuRI | GGCC | 1 cut(s) | 553 |
| BveI | ACCTGC | 1 cut(s) | 57 |
| Cac8I | GCNNGC | 1 cut(s) | 571 |
| CciI | TCATGA | 1 cut(s) | 558 |
| Cfr13I | GGNCC | 1 cut(s) | 193 |
| Csp6I | GTAC | 1 cut(s) | 458 |
| CviAII | CATG | 3 cut(s) | 310, 505, 559 |
| CviJI | RGCY | 6 cut(s) | 155, 326, 379, 410, 553, 569 |
| CviKI_1 | RGCY | 6 cut(s) | 155, 326, 379, 410, 553, 569 |
| CviQI | GTAC | 1 cut(s) | 458 |
| DdeI | CTNAG | 5 cut(s) | 6, 294, 319, 370, 662 |
| DpnI | GATC | 3 cut(s) | 255, 414, 671 |
| DpnII | GATC | 3 cut(s) | 253, 412, 669 |
| DraI | TTTAAA | 1 cut(s) | 592 |
| Eam1104I | CTCTTC | 1 cut(s) | 164 |
| EarI | CTCTTC | 1 cut(s) | 164 |
| Eco147I | AGGCCT | 1 cut(s) | 553 |
| Eco47I | GGWCC | 1 cut(s) | 193 |
| Eco81I | CCTNAGG | 2 cut(s) | 6, 662 |
| EcoRII | CCWGG | 1 cut(s) | 195 |
| EcoT22I | ATGCAT | 3 cut(s) | 311, 361, 427 |
| FaeI | CATG | 3 cut(s) | 313, 508, 562 |
| FaiI | YATR | 9 cut(s) | 311, 341, 346, 357, 365, 427, 506, 560, 694 |
| FatI | CATG | 3 cut(s) | 309, 504, 558 |
| FauI | CCCGC | 1 cut(s) | 578 |
| FspBI | CTAG | 1 cut(s) | 63 |
| HaeIII | GGCC | 1 cut(s) | 553 |
| HapII | CCGG | 1 cut(s) | 257 |
| Hin1II | CATG | 3 cut(s) | 313, 508, 562 |
| HincII | GTYRAC | 1 cut(s) | 135 |
| HindII | GTYRAC | 1 cut(s) | 135 |
| HinfI | GANTC | 2 cut(s) | 512, 538 |
| HpaII | CCGG | 1 cut(s) | 257 |
| HphI | GGTGA | 2 cut(s) | 386, 507 |
| Hpy166II | GTNNAC | 1 cut(s) | 135 |
| Hpy188I | TCNGA | 1 cut(s) | 645 |
| Hpy188III | TCNNGA | 1 cut(s) | 559 |
| Hpy8I | GTNNAC | 1 cut(s) | 135 |
| HpyAV | CCTTC | 2 cut(s) | 79, 152 |
| HpyCH4IV | ACGT | 2 cut(s) | 51, 495 |
| HpyCH4V | TGCA | 5 cut(s) | 160, 249, 309, 359, 425 |
| HpyF3I | CTNAG | 5 cut(s) | 6, 294, 319, 370, 662 |
| HpySE526I | ACGT | 2 cut(s) | 51, 495 |
| Hsp92II | CATG | 3 cut(s) | 313, 508, 562 |
| Kzo9I | GATC | 3 cut(s) | 253, 412, 669 |
| LpnPI | CCDG | 6 cut(s) | 52, 182, 209, 270, 446, 495 |
| LweI | GCATC | 1 cut(s) | 368 |
| MaeI | CTAG | 1 cut(s) | 63 |
| MaeII | ACGT | 2 cut(s) | 51, 495 |
| MaeIII | GTNAC | 1 cut(s) | 222 |
| MalI | GATC | 3 cut(s) | 255, 414, 671 |
| MboI | GATC | 3 cut(s) | 253, 412, 669 |
| MboII | GAAGA | 2 cut(s) | 181, 458 |
| MflI | RGATCY | 1 cut(s) | 253 |
| MhlI | GDGCHC | 1 cut(s) | 57 |
| MluCI | AATT | 7 cut(s) | 19, 233, 270, 399, 404, 611, 655 |
| MnlI | CCTC | 5 cut(s) | 82, 165, 181, 502, 543 |
| Mph1103I | ATGCAT | 3 cut(s) | 311, 361, 427 |
| MseI | TTAA | 6 cut(s) | 147, 333, 381, 591, 602, 653 |
| MspA1I | CMGCKG | 1 cut(s) | 485 |
| MspI | CCGG | 1 cut(s) | 257 |
| MspR9I | CCNGG | 2 cut(s) | 197, 258 |
| MvaI | CCWGG | 1 cut(s) | 197 |
| NciI | CCSGG | 1 cut(s) | 258 |
| NdeII | GATC | 3 cut(s) | 253, 412, 669 |
| NlaIII | CATG | 3 cut(s) | 313, 508, 562 |
| NsiI | ATGCAT | 3 cut(s) | 311, 361, 427 |
| NspI | RCATGY | 1 cut(s) | 313 |
| PagI | TCATGA | 1 cut(s) | 558 |
| PceI | AGGCCT | 1 cut(s) | 553 |
| PfeI | GAWTC | 2 cut(s) | 512, 538 |
| PflFI | GACNNNGTC | 1 cut(s) | 28 |
| Ple19I | CGATCG | 1 cut(s) | 415 |
| Ppu21I | YACGTR | 1 cut(s) | 496 |
| PshBI | ATTAAT | 1 cut(s) | 333 |
| Psp6I | CCWGG | 1 cut(s) | 195 |
| PspGI | CCWGG | 1 cut(s) | 195 |
| PspPI | GGNCC | 1 cut(s) | 193 |
| PsuI | RGATCY | 1 cut(s) | 253 |
| PsyI | GACNNNGTC | 1 cut(s) | 28 |
| PvuI | CGATCG | 1 cut(s) | 415 |
| RsaI | GTAC | 1 cut(s) | 459 |
| RsaNI | GTAC | 1 cut(s) | 458 |
| SaqAI | TTAA | 6 cut(s) | 147, 333, 381, 591, 602, 653 |
| Sau3AI | GATC | 3 cut(s) | 253, 412, 669 |
| Sau96I | GGNCC | 1 cut(s) | 193 |
| ScrFI | CCNGG | 2 cut(s) | 197, 258 |
| SduI | GDGCHC | 1 cut(s) | 57 |
| SfaNI | GCATC | 1 cut(s) | 368 |
| SinI | GGWCC | 1 cut(s) | 193 |
| Sse9I | AATT | 7 cut(s) | 19, 233, 270, 399, 404, 611, 655 |
| SseBI | AGGCCT | 1 cut(s) | 553 |
| SsiI | CCGC | 2 cut(s) | 485, 571 |
| SspMI | CTAG | 1 cut(s) | 63 |
| StuI | AGGCCT | 1 cut(s) | 553 |
| StyD4I | CCNGG | 2 cut(s) | 195, 256 |
| TaiI | ACGT | 2 cut(s) | 54, 498 |
| TaqI | TCGA | 2 cut(s) | 23, 329 |
| TasI | AATT | 7 cut(s) | 19, 233, 270, 399, 404, 611, 655 |
| TfiI | GAWTC | 2 cut(s) | 512, 538 |
| Tru1I | TTAA | 6 cut(s) | 147, 333, 381, 591, 602, 653 |
| Tru9I | TTAA | 6 cut(s) | 147, 333, 381, 591, 602, 653 |
| TspDTI | ATGAA | 3 cut(s) | 380, 547, 575 |
| TspGWI | ACGGA | 1 cut(s) | 264 |
| Tth111I | GACNNNGTC | 1 cut(s) | 28 |
| VpaK11BI | GGWCC | 1 cut(s) | 193 |
| VspI | ATTAAT | 1 cut(s) | 333 |
| XapI | RAATTY | 3 cut(s) | 19, 611, 655 |
| XceI | RCATGY | 1 cut(s) | 313 |
| XspI | CTAG | 1 cut(s) | 63 |
| Zsp2I | ATGCAT | 3 cut(s) | 311, 361, 427 |