FvH4_3g01590

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000053
Physical Location & Seq
Reverse (-)
825653 .. 829251
3599 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g01590.t1

Sequence Viewer

Length: 1686 bp
ATGTCTTTCCAACTTCCTTCAGCAGCATCTCAAGCCCCAACCCCAAATGCCGCTGCTCATGTCATGCGACGTTCAGTTAACTTCAAGCCTAGCATATGGGGAGAACATTTTCTGTCGTATGATTCCATGGAAGTGGATATCATTCTGGAGCAACAGGTTCAACAACTGAAGGAAGAAATCAAGAGGATGCTTATGGATCATGTCAAGGACGATTCACAAAAACTAAGCTTGATTGATGATATTCAACGCTTAGGCGTGTCATACCATTTCGAGAATGAGATTTGTGAAATTTTGCAGCAAATATTTGACAAAGACCATGTTTCATATGATGACGTTCTTCATCAAAATGATTCCGACCTTTATGCAGTTGCTCTTCGTTTCCGATTGCTCAGACAGCAAGGGCACAATACTTCCTCTGACAAGTACTTCAGCAACTTGAAGGACAATGATGGAAAGTTCAAGGAATCACTTGTCAATGATATAAAAGGACTACTAAGCTTGTACGAAGCTACGCATCTTCAGATACACGGTGATGATATACTAGACGAGGCACTAACCTTCACCACAACTCATCTCGAGTCTGCAACACGCCGCGGTTTAAGCTCCCCACTTTCGAAACAAGTAACTCATGCCTTGTATCAGCCACTCTGGAAGGGCATGACAAGGATAGAAGTGAGCCATTACTTAGCTATCTACCAGGAAGACAAGTCTCATAATGCAACTCTTCTGAATTTAGCAAGGCTGGATTTCAACCTACTGCAGCAACTCCATAAAAAAGAACTATGTGAACTTACAAGGTGGTGGAAGGATGTGGACTTCGTGAAGAACTTACCTTTTGCTAGAGACAGGGTGGTTGAGTGCTACTTAAGTACTTTGGGAGTCTTCTTTGAGCCAAAATACTACATTGCAAGGAGGACATTATGCAAATTTATTTACATGGTAGCCGTGATTGATGACATGTATGATGTTTATGGCACACTTGAAGAACTAGAGCTCTTTAATGAAGCTATTCAAAGGTGGGACATCTCTGCCATGGATCCATTGCCAGACTATATGAAAGTCTGTTATAAGACACTGTTGGATGTCTACACTGAACTCGAAGAAAATCTTGCAAGCGAGGGAAGCTTGTATGGCATTCATCACGCAAGAGAATCGATGAAAATGCATGTCGGTGGTTACATGAAAGAAGCTAGATGGTTTAACTCGAATTACACCCCAACATCTGATGAATACATGCCACTAGCAGCGCTTACATCCTTGTATTCCTTGACAATCGTAGCCGCTGTTGGAATGGGAGTTGCTGCTTCAAAAGACTCCTTGGATTGGCTACTCACCGACCCTGGCATCGTAAATGCTCCATCTGTAATCGGCAGACTCTTAAACGACATTATGTCGCATCAGAGAGAGCATTCTGCTACAGCTGTGCAATTATACATGAAAGAACATGGTGCTACAGAAGAAGCAGCCATAGTTGAACTAATTAATCAAGTGAATGATGCATGGAAGATCATAAACAAAGCTTGCCTCAACCCTACCCGAATCCCATTGCCGGTTCTAATGCGACCTCTCAACCTTGCTCGTGTTATGGAAATGTTGTACAAGAACGAAGATGCATTTTCGAACCCAGGGGATGAGATCAAGGGTTTTGTGACTTCTGTTCTTATCGAACCTGTGCTTATTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

562

Amino Acids

64.28

Weight (kDa)

5.27

Isoelectric Point (pI)

47.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 32 - 212 9.2e-56 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 269 - 502 7.1e-84 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 309 - 502 1.9e-49 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1068
AccI GTMKAC 1 cut(s) 1086
AccII CGCG 1 cut(s) 594
AciI CCGC 4 cut(s) 51, 592, 594, 1281
AclWI GGATC 3 cut(s) 204, 1031, 1044
AcsI RAATTY 3 cut(s) 288, 730, 926
AcuI CTGAAG 3 cut(s) 188, 412, 503
AfaI GTAC 4 cut(s) 425, 503, 871, 1598
AfeI AGCGCT 1 cut(s) 1248
AfiI CCNNNNNNNGG 2 cut(s) 1323, 1549
AflII CTTAAG 1 cut(s) 865
AflIII ACRYGT 1 cut(s) 957
AhdI GACNNNNNGTC 1 cut(s) 1390
AjnI CCWGG 3 cut(s) 696, 1339, 1624
Alw21I GWGCWC 1 cut(s) 996
Alw26I GTCTC 2 cut(s) 714, 837
AlwI GGATC 3 cut(s) 204, 1031, 1044
Ama87I CYCGRG 1 cut(s) 575
Aor51HI AGCGCT 1 cut(s) 1248
ApeKI GCWGC 7 cut(s) 23, 53, 295, 760, 1244, 1301, 1463
ApoI RAATTY 3 cut(s) 288, 730, 926
AseI ATTAAT 1 cut(s) 1482
Asp700I GAANNNNTTC 2 cut(s) 108, 1008
AspLEI GCGC 1 cut(s) 1249
AsuHPI GGTGA 3 cut(s) 542, 553, 1324
AsuII TTCGAA 2 cut(s) 614, 1619
AvaI CYCGRG 1 cut(s) 575
BaeGI GKGCMC 1 cut(s) 405
BamHI GGATCC 1 cut(s) 1036
BanII GRGCYC 1 cut(s) 996
BauI CACGAG 1 cut(s) 1578
BbsI GAAGAC 2 cut(s) 708, 874
Bbv12I GWGCWC 1 cut(s) 996
BbvI GCAGC 7 cut(s) 35, 40, 307, 772, 1256, 1288, 1475
BccI CCATC 3 cut(s) 443, 1188, 1366
BceAI ACGGC 1 cut(s) 929
BcgI CGANNNNNNTGC 6 cut(s) 344, 378, 1134, 1144, 1168, 1178
BciT130I CCWGG 3 cut(s) 698, 1341, 1626
BcoDI GTCTC 2 cut(s) 714, 837
BfaI CTAG 6 cut(s) 90, 542, 840, 989, 1191, 1241
BfmI CTRYAG 3 cut(s) 758, 1416, 1452
BfoI RGCGCY 1 cut(s) 1250
BfrI CTTAAG 1 cut(s) 865
BmcAI AGTACT 2 cut(s) 425, 871
Bme1390I CCNGG 3 cut(s) 698, 1341, 1626
BmeRI GACNNNNNGTC 1 cut(s) 1390
BmeT110I CYCGRG 1 cut(s) 575
BmiI GGNNCC 1 cut(s) 1038
BmrFI CCNGG 3 cut(s) 698, 1341, 1626
BmsI GCATC 7 cut(s) 35, 177, 523, 1353, 1405, 1486, 1600
BpiI GAAGAC 2 cut(s) 708, 874
BpmI CTGGAG 1 cut(s) 167
Bpu10I CCTNAGC 1 cut(s) 250
Bpu14I TTCGAA 2 cut(s) 614, 1619
BpuEI CTTGAG 1 cut(s) 15
Bsa29I ATCGAT 1 cut(s) 1154
BsaJI CCNNGG 7 cut(s) 126, 592, 1032, 1317, 1339, 1624, 1625
Bsc4I CCNNNNNNNGG 2 cut(s) 1323, 1549
Bse118I RCCGGY 1 cut(s) 1549
Bse3DI GCAATG 3 cut(s) 903, 1040, 1544
BseBI CCWGG 3 cut(s) 698, 1341, 1626
BseCI ATCGAT 1 cut(s) 1154
BseDI CCNNGG 7 cut(s) 126, 592, 1032, 1317, 1339, 1624, 1625
BseGI GGATG 5 cut(s) 192, 814, 1087, 1253, 1636
BseLI CCNNNNNNNGG 2 cut(s) 1323, 1549
BseMI GCAATG 3 cut(s) 903, 1040, 1544
BseMII CTCAG 1 cut(s) 403
BseSI GKGCMC 1 cut(s) 405
BseXI GCAGC 7 cut(s) 35, 40, 307, 772, 1256, 1288, 1475
Bsh1236I CGCG 1 cut(s) 594
BshVI ATCGAT 1 cut(s) 1154
BsiHKAI GWGCWC 1 cut(s) 996
BsiHKCI CYCGRG 1 cut(s) 575
BsiSI CCGG 1 cut(s) 1550
BslFI GGGAC 1 cut(s) 1034
BslI CCNNNNNNNGG 2 cut(s) 1323, 1549
BsmAI GTCTC 2 cut(s) 714, 837
BsmFI GGGAC 1 cut(s) 1034
BsmI GAATGC 2 cut(s) 1134, 1408
BsoBI CYCGRG 1 cut(s) 575
Bsp119I TTCGAA 2 cut(s) 614, 1619
Bsp1286I GDGCHC 2 cut(s) 405, 996
Bsp1407I TGTACA 1 cut(s) 1596
Bsp143I GATC 4 cut(s) 196, 1036, 1506, 1635
Bsp19I CCATGG 2 cut(s) 126, 1032
BspACI CCGC 4 cut(s) 51, 592, 594, 1281
BspCNI CTCAG 1 cut(s) 402
BspDI ATCGAT 1 cut(s) 1154
BspFNI CGCG 1 cut(s) 594
BspLI GGNNCC 1 cut(s) 1038
BspMAI CTGCAG 1 cut(s) 762
BspPI GGATC 3 cut(s) 204, 1031, 1044
BspQI GCTCTTC 1 cut(s) 378
BspT104I TTCGAA 2 cut(s) 614, 1619
BspTI CTTAAG 1 cut(s) 865
BsrDI GCAATG 3 cut(s) 903, 1040, 1544
BsrFI RCCGGY 1 cut(s) 1549
BsrGI TGTACA 1 cut(s) 1596
BssAI RCCGGY 1 cut(s) 1549
BssECI CCNNGG 7 cut(s) 126, 592, 1032, 1317, 1339, 1624, 1625
BssMI GATC 4 cut(s) 196, 1036, 1506, 1635
BssSI CACGAG 1 cut(s) 1578
BssT1I CCWWGG 3 cut(s) 126, 1032, 1317
Bst2BI CACGAG 1 cut(s) 1578
Bst2UI CCWGG 3 cut(s) 698, 1341, 1626
Bst4CI ACNGT 2 cut(s) 530, 1077
Bst6I CTCTTC 2 cut(s) 378, 729
BstAFI CTTAAG 1 cut(s) 865
BstAUI TGTACA 1 cut(s) 1596
BstBI TTCGAA 2 cut(s) 614, 1619
BstC8I GCNNGC 2 cut(s) 1114, 1522
BstDEI CTNAG 5 cut(s) 224, 250, 389, 494, 685
BstDSI CCRYGG 3 cut(s) 126, 592, 1032
BstF5I GGATG 5 cut(s) 192, 814, 1087, 1253, 1636
BstFNI CGCG 1 cut(s) 594
BstH2I RGCGCY 1 cut(s) 1250
BstHHI GCGC 1 cut(s) 1249
BstKTI GATC 4 cut(s) 199, 1039, 1509, 1638
BstMAI GTCTC 2 cut(s) 714, 837
BstMBI GATC 4 cut(s) 196, 1036, 1506, 1635
BstMWI GCNNNNNNNGC 5 cut(s) 32, 394, 600, 1122, 1131
BstNI CCWGG 3 cut(s) 698, 1341, 1626
BstNSI RCATGY 3 cut(s) 961, 1169, 1237
BstSCI CCNGG 3 cut(s) 696, 1339, 1624
BstSFI CTRYAG 3 cut(s) 758, 1416, 1452
BstSLI GKGCMC 1 cut(s) 405
BstUI CGCG 1 cut(s) 594
BstV1I GCAGC 7 cut(s) 35, 40, 307, 772, 1256, 1288, 1475
BstV2I GAAGAC 2 cut(s) 708, 874
BstX2I RGATCY 1 cut(s) 1036
BstXI CCANNNNNNTGG 1 cut(s) 133
BstYI RGATCY 1 cut(s) 1036
Bsu15I ATCGAT 1 cut(s) 1154
BsuTUI ATCGAT 1 cut(s) 1154
BtgI CCRYGG 3 cut(s) 126, 592, 1032
BtsCI GGATG 5 cut(s) 192, 814, 1087, 1253, 1636
BtsIMutI CAGTG 2 cut(s) 1073, 1089
Cac8I GCNNGC 2 cut(s) 1114, 1522
CfoI GCGC 1 cut(s) 1249
Cfr10I RCCGGY 1 cut(s) 1549
Cfr42I CCGCGG 1 cut(s) 595
ClaI ATCGAT 1 cut(s) 1154
Csp6I GTAC 4 cut(s) 424, 502, 870, 1597
CviQI GTAC 4 cut(s) 424, 502, 870, 1597
DdeI CTNAG 5 cut(s) 224, 250, 389, 494, 685
DpnI GATC 4 cut(s) 198, 1038, 1508, 1637
DpnII GATC 4 cut(s) 196, 1036, 1506, 1635
DriI GACNNNNNGTC 1 cut(s) 1390
Eam1104I CTCTTC 2 cut(s) 378, 729
Eam1105I GACNNNNNGTC 1 cut(s) 1390
EarI CTCTTC 2 cut(s) 378, 729
Ecl136II GAGCTC 1 cut(s) 994
Eco130I CCWWGG 3 cut(s) 126, 1032, 1317
Eco24I GRGCYC 1 cut(s) 996
Eco32I GATATC 1 cut(s) 139
Eco47III AGCGCT 1 cut(s) 1248
Eco53kI GAGCTC 1 cut(s) 994
Eco57I CTGAAG 3 cut(s) 188, 412, 503
Eco88I CYCGRG 1 cut(s) 575
EcoICRI GAGCTC 1 cut(s) 994
EcoRII CCWGG 3 cut(s) 696, 1339, 1624
EcoRV GATATC 1 cut(s) 139
EcoT14I CCWWGG 3 cut(s) 126, 1032, 1317
EcoT22I ATGCAT 3 cut(s) 1167, 1501, 1615
EcoT38I GRGCYC 1 cut(s) 996
ErhI CCWWGG 3 cut(s) 126, 1032, 1317
FalI AAGNNNNNCTT 2 cut(s) 1092, 1124
FaqI GGGAC 1 cut(s) 1034
FauNDI CATATG 2 cut(s) 95, 325
FblI GTMKAC 1 cut(s) 1086
FokI GGATG 5 cut(s) 199, 821, 1094, 1240, 1643
FriOI GRGCYC 1 cut(s) 996
FspBI CTAG 6 cut(s) 90, 542, 840, 989, 1191, 1241
GlaI GCGC 1 cut(s) 1248
GsuI CTGGAG 1 cut(s) 167
HaeII RGCGCY 1 cut(s) 1250
HapII CCGG 1 cut(s) 1550
HhaI GCGC 1 cut(s) 1249
Hin6I GCGC 1 cut(s) 1247
HinP1I GCGC 1 cut(s) 1247
HincII GTYRAC 1 cut(s) 79
HindII GTYRAC 1 cut(s) 79
HindIII AAGCTT 4 cut(s) 226, 496, 1123, 1518
HpaI GTTAAC 1 cut(s) 79
HpaII CCGG 1 cut(s) 1550
HphI GGTGA 3 cut(s) 542, 553, 1324
Hpy166II GTNNAC 4 cut(s) 79, 788, 814, 1087
Hpy188I TCNGA 8 cut(s) 355, 383, 392, 418, 522, 729, 1225, 1401
Hpy188III TCNNGA 6 cut(s) 146, 181, 271, 575, 649, 820
Hpy8I GTNNAC 4 cut(s) 79, 788, 814, 1087
Hpy99I CGWCG 1 cut(s) 72
HpyAV CCTTC 6 cut(s) 27, 163, 433, 568, 646, 799
HpyCH4III ACNGT 2 cut(s) 530, 1077
HpyCH4IV ACGT 2 cut(s) 70, 333
HpyF10VI GCNNNNNNNGC 5 cut(s) 32, 394, 600, 1122, 1131
HpyF3I CTNAG 5 cut(s) 224, 250, 389, 494, 685
HpySE526I ACGT 2 cut(s) 70, 333
HspAI GCGC 1 cut(s) 1247
KspAI GTTAAC 1 cut(s) 79
KspI CCGCGG 1 cut(s) 595
Kzo9I GATC 4 cut(s) 196, 1036, 1506, 1635
LguI GCTCTTC 1 cut(s) 378
LmnI GCTCC 3 cut(s) 148, 608, 1360
Lsp1109I GCAGC 7 cut(s) 35, 40, 307, 772, 1256, 1288, 1475
LweI GCATC 7 cut(s) 35, 177, 523, 1353, 1405, 1486, 1600
MaeI CTAG 6 cut(s) 90, 542, 840, 989, 1191, 1241
MaeII ACGT 2 cut(s) 70, 333
MaeIII GTNAC 3 cut(s) 622, 1175, 1648
MalI GATC 4 cut(s) 198, 1038, 1508, 1637
MboI GATC 4 cut(s) 196, 1036, 1506, 1635
MflI RGATCY 1 cut(s) 1036
MhlI GDGCHC 2 cut(s) 405, 996
MluCI AATT 6 cut(s) 288, 730, 926, 1207, 1427, 1479
MlyI GAGTC 4 cut(s) 587, 888, 1307, 1368
MmeI TCCRAC 4 cut(s) 34, 378, 1059, 1267
MnlI CCTC 7 cut(s) 177, 424, 541, 906, 1111, 1535, 1575
Mph1103I ATGCAT 3 cut(s) 1167, 1501, 1615
MroXI GAANNNNTTC 2 cut(s) 108, 1008
MseI TTAA 7 cut(s) 78, 599, 866, 999, 1200, 1379, 1482
MslI CAYNNNNRTG 4 cut(s) 131, 345, 531, 1170
MspA1I CMGCKG 4 cut(s) 53, 594, 1283, 1421
MspCI CTTAAG 1 cut(s) 865
MspI CCGG 1 cut(s) 1550
MspR9I CCNGG 3 cut(s) 698, 1341, 1626
Mva1269I GAATGC 2 cut(s) 1134, 1408
MvaI CCWGG 3 cut(s) 698, 1341, 1626
MvnI CGCG 1 cut(s) 594
MwoI GCNNNNNNNGC 5 cut(s) 32, 394, 600, 1122, 1131
NcoI CCATGG 2 cut(s) 126, 1032
NdeI CATATG 2 cut(s) 95, 325
NdeII GATC 4 cut(s) 196, 1036, 1506, 1635
NlaIV GGNNCC 1 cut(s) 1038
NmuCI GTSAC 1 cut(s) 1648
NsiI ATGCAT 3 cut(s) 1167, 1501, 1615
NspI RCATGY 3 cut(s) 961, 1169, 1237
NspV TTCGAA 2 cut(s) 614, 1619
PaeR7I CTCGAG 1 cut(s) 575
PasI CCCWGGG 1 cut(s) 1625
PciI ACATGT 1 cut(s) 957
PciSI GCTCTTC 1 cut(s) 378
PctI GAATGC 2 cut(s) 1134, 1408
PdmI GAANNNNTTC 2 cut(s) 108, 1008
PfeI GAWTC 6 cut(s) 122, 212, 350, 464, 1151, 1539
PleI GAGTC 4 cut(s) 586, 887, 1307, 1368
PpsI GAGTC 4 cut(s) 586, 887, 1307, 1368
PscI ACATGT 1 cut(s) 957
PshBI ATTAAT 1 cut(s) 1482
PsiI TTATAA 1 cut(s) 1068
Psp124BI GAGCTC 1 cut(s) 996
Psp6I CCWGG 3 cut(s) 696, 1339, 1624
PspGI CCWGG 3 cut(s) 696, 1339, 1624
PspN4I GGNNCC 1 cut(s) 1038
PstI CTGCAG 1 cut(s) 762
PsuI RGATCY 1 cut(s) 1036
PvuII CAGCTG 1 cut(s) 1421
RsaI GTAC 4 cut(s) 425, 503, 871, 1598
RsaNI GTAC 4 cut(s) 424, 502, 870, 1597
RseI CAYNNNNRTG 4 cut(s) 131, 345, 531, 1170
SacI GAGCTC 1 cut(s) 996
SacII CCGCGG 1 cut(s) 595
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 7 cut(s) 78, 599, 866, 999, 1200, 1379, 1482
Sau3AI GATC 4 cut(s) 196, 1036, 1506, 1635
ScaI AGTACT 2 cut(s) 425, 871
SchI GAGTC 4 cut(s) 587, 888, 1307, 1368
ScrFI CCNGG 3 cut(s) 698, 1341, 1626
SduI GDGCHC 2 cut(s) 405, 996
SfaNI GCATC 7 cut(s) 35, 177, 523, 1353, 1405, 1486, 1600
SfcI CTRYAG 3 cut(s) 758, 1416, 1452
Sfr274I CTCGAG 1 cut(s) 575
Sfr303I CCGCGG 1 cut(s) 595
SfuI TTCGAA 2 cut(s) 614, 1619
SgrBI CCGCGG 1 cut(s) 595
SlaI CTCGAG 1 cut(s) 575
SmiMI CAYNNNNRTG 4 cut(s) 131, 345, 531, 1170
SmlI CTYRAG 3 cut(s) 30, 575, 865
SmoI CTYRAG 3 cut(s) 30, 575, 865
Sse9I AATT 6 cut(s) 288, 730, 926, 1207, 1427, 1479
SsiI CCGC 4 cut(s) 51, 592, 594, 1281
SspI AATATT 1 cut(s) 303
SspMI CTAG 6 cut(s) 90, 542, 840, 989, 1191, 1241
SstI GAGCTC 1 cut(s) 996
StyD4I CCNGG 3 cut(s) 696, 1339, 1624
StyI CCWWGG 3 cut(s) 126, 1032, 1317
TaaI ACNGT 2 cut(s) 530, 1077
TaiI ACGT 2 cut(s) 73, 336
TaqI TCGA 8 cut(s) 270, 576, 614, 1098, 1154, 1205, 1619, 1665
TasI AATT 6 cut(s) 288, 730, 926, 1207, 1427, 1479
TatI WGTACW 3 cut(s) 423, 869, 1596
TauI GCSGC 3 cut(s) 53, 594, 1283
TfiI GAWTC 6 cut(s) 122, 212, 350, 464, 1151, 1539
Tru1I TTAA 7 cut(s) 78, 599, 866, 999, 1200, 1379, 1482
Tru9I TTAA 7 cut(s) 78, 599, 866, 999, 1200, 1379, 1482
TscAI CASTG 2 cut(s) 1080, 1096
TseFI GTSAC 1 cut(s) 1648
TseI GCWGC 7 cut(s) 23, 53, 295, 760, 1244, 1301, 1463
Tsp45I GTSAC 1 cut(s) 1648
TspDTI ATGAA 9 cut(s) 312, 329, 1017, 1070, 1127, 1172, 1196, 1242, 1451
TspRI CASTG 2 cut(s) 1080, 1096
Vha464I CTTAAG 1 cut(s) 865
VspI ATTAAT 1 cut(s) 1482
XapI RAATTY 3 cut(s) 288, 730, 926
XceI RCATGY 3 cut(s) 961, 1169, 1237
XhoI CTCGAG 1 cut(s) 575
XmiI GTMKAC 1 cut(s) 1086
XmnI GAANNNNTTC 2 cut(s) 108, 1008
XspI CTAG 6 cut(s) 90, 542, 840, 989, 1191, 1241
ZrmI AGTACT 2 cut(s) 425, 871
Zsp2I ATGCAT 3 cut(s) 1167, 1501, 1615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.