FvH4_3g22162

(-)-germacrene D synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000053
Physical Location & Seq
Reverse (-)
15205625 .. 15206733
1109 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g22162.t1

Sequence Viewer

Length: 696 bp
ATGTCTTACCACTTTGAATACGAGATTGACCAAAATATGCAGCAAATTCACGAAAACCTTAATGGCACCTGTGATGATGATGACCTGCACACTTGTGCTCTTCGTTTTCGCTTGTTAAGGCAGCATGGTTATAATGTTTCTTGTGATATGTTCAACAAGTTCAAAGATTGTGATGGGAATTTTGACGAATCGCTTCACCACGATGTAGCAGGACTCCAAAGCTTGTACGAAGCCACACATCTTAGGCCATTTCGGAAGGGCTTACCGAGGCTAGAAGTGAGGCACTACATGTCTCTTCACCAGGAACTGCATGGATCACGTAACCATGTTTTGCTGAGATTTGCAAAGCTGGATTTCAACCTGCTCCAACAAGTGCATCAGAAAGAACTAAGTGATATTGCAAGGTGGTGGAAGAAGTTGGACTTTGCTAGCAAGCTTCCTTTTGCAAGAGACAGAGTGATTGAGTGCTACTTCTGGACTTTAGGAGTCTACTTTGAACCCAAGAATTACTTTGCTAGGAGAACCCTTACCAAAGTTCTTGCCATGGCATCCATTATTGATGACATTTACGATGTGTATGGCACTGTCGAAGAACTAGATCTCTTTACTAGAGCAATTGAGAGATGGGACATCTCAGCCATGGATGAACTGTCGAAGTATATGCAAGTCTGTTACGAGGCACTCTTAGATGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

232

Amino Acids

27.56

Weight (kDa)

5.71

Isoelectric Point (pI)

50.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 2 - 82 1.1e-31 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 138 - 231 4.7e-41 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 178 - 231 1.9e-12 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 132
Acc36I ACCTGC 2 cut(s) 93, 369
AccB1I GGYRCC 1 cut(s) 65
AccI GTMKAC 1 cut(s) 489
AclWI GGATC 1 cut(s) 322
AcsI RAATTY 2 cut(s) 45, 178
AfaI GTAC 1 cut(s) 227
AflIII ACRYGT 1 cut(s) 288
AgsI TTSAA 5 cut(s) 17, 154, 163, 358, 497
AjnI CCWGG 1 cut(s) 300
AleI CACNNNNGTG 1 cut(s) 93
AluBI AGCT 3 cut(s) 222, 349, 436
AluI AGCT 3 cut(s) 222, 349, 436
Alw21I GWGCWC 1 cut(s) 100
Alw26I GTCTC 2 cut(s) 297, 444
AlwI GGATC 1 cut(s) 322
AlwNI CAGNNNCTG 1 cut(s) 307
AoxI GGCC 1 cut(s) 245
ApeKI GCWGC 2 cut(s) 40, 121
ApoI RAATTY 2 cut(s) 45, 178
Asp700I GAANNNNTTC 1 cut(s) 192
AsuHPI GGTGA 2 cut(s) 188, 290
AsuNHI GCTAGC 1 cut(s) 428
BanI GGYRCC 1 cut(s) 65
Bbv12I GWGCWC 1 cut(s) 100
BbvI GCAGC 2 cut(s) 52, 133
BccI CCATC 2 cut(s) 167, 618
BcgI CGANNNNNNTGC 2 cut(s) 643, 677
BciT130I CCWGG 1 cut(s) 302
BcoDI GTCTC 2 cut(s) 297, 444
BfaI CTAG 6 cut(s) 272, 429, 516, 596, 609, 694
BfuAI ACCTGC 2 cut(s) 93, 369
BglII AGATCT 1 cut(s) 598
BisI GCNGC 2 cut(s) 41, 122
BlsI GCNGC 2 cut(s) 42, 123
Bme1390I CCNGG 1 cut(s) 302
BmiI GGNNCC 1 cut(s) 67
BmrFI CCNGG 1 cut(s) 302
BmsI GCATC 2 cut(s) 385, 557
BmtI GCTAGC 1 cut(s) 432
BsaAI YACGTR 1 cut(s) 320
BsaJI CCNNGG 3 cut(s) 266, 543, 639
BseBI CCWGG 1 cut(s) 302
BseDI CCNNGG 3 cut(s) 266, 543, 639
BseGI GGATG 2 cut(s) 548, 649
BseMII CTCAG 2 cut(s) 326, 648
BseXI GCAGC 2 cut(s) 52, 133
BsgI GTGCAG 1 cut(s) 71
BshFI GGCC 1 cut(s) 247
BshNI GGYRCC 1 cut(s) 65
BsiHKAI GWGCWC 1 cut(s) 100
BslFI GGGAC 1 cut(s) 641
BsmAI GTCTC 2 cut(s) 297, 444
BsmFI GGGAC 1 cut(s) 641
BsnI GGCC 1 cut(s) 247
Bsp1286I GDGCHC 1 cut(s) 100
Bsp143I GATC 2 cut(s) 314, 598
Bsp19I CCATGG 2 cut(s) 543, 639
BspANI GGCC 1 cut(s) 247
BspCNI CTCAG 2 cut(s) 327, 647
BspLI GGNNCC 1 cut(s) 67
BspMI ACCTGC 2 cut(s) 93, 369
BspOI GCTAGC 1 cut(s) 432
BspPI GGATC 1 cut(s) 322
BspQI GCTCTTC 1 cut(s) 105
BspT107I GGYRCC 1 cut(s) 65
BssECI CCNNGG 3 cut(s) 266, 543, 639
BssMI GATC 2 cut(s) 314, 598
BssT1I CCWWGG 2 cut(s) 543, 639
Bst2UI CCWGG 1 cut(s) 302
Bst4CI ACNGT 2 cut(s) 586, 651
Bst6I CTCTTC 2 cut(s) 105, 300
BstBAI YACGTR 1 cut(s) 320
BstC8I GCNNGC 2 cut(s) 430, 434
BstDEI CTNAG 5 cut(s) 242, 335, 389, 634, 685
BstDSI CCRYGG 2 cut(s) 543, 639
BstF5I GGATG 2 cut(s) 548, 649
BstKTI GATC 2 cut(s) 317, 601
BstMAI GTCTC 2 cut(s) 297, 444
BstMBI GATC 2 cut(s) 314, 598
BstNI CCWGG 1 cut(s) 302
BstNSI RCATGY 1 cut(s) 292
BstSCI CCNGG 1 cut(s) 300
BstV1I GCAGC 2 cut(s) 52, 133
BstX2I RGATCY 1 cut(s) 598
BstYI RGATCY 1 cut(s) 598
BsuRI GGCC 1 cut(s) 247
BtgI CCRYGG 2 cut(s) 543, 639
BtsCI GGATG 2 cut(s) 548, 649
BtsIMutI CAGTG 1 cut(s) 582
BveI ACCTGC 2 cut(s) 93, 369
Cac8I GCNNGC 2 cut(s) 430, 434
CaiI CAGNNNCTG 1 cut(s) 307
Csp6I GTAC 1 cut(s) 226
CviAII CATG 6 cut(s) 125, 289, 311, 326, 544, 640
CviJI RGCY 8 cut(s) 222, 233, 247, 261, 271, 349, 436, 638
CviKI_1 RGCY 8 cut(s) 222, 233, 247, 261, 271, 349, 436, 638
CviQI GTAC 1 cut(s) 226
DdeI CTNAG 5 cut(s) 242, 335, 389, 634, 685
DpnI GATC 2 cut(s) 316, 600
DpnII GATC 2 cut(s) 314, 598
Eam1104I CTCTTC 2 cut(s) 105, 300
EarI CTCTTC 2 cut(s) 105, 300
Eco130I CCWWGG 2 cut(s) 543, 639
EcoRII CCWGG 1 cut(s) 300
EcoT14I CCWWGG 2 cut(s) 543, 639
ErhI CCWWGG 2 cut(s) 543, 639
FaeI CATG 6 cut(s) 128, 292, 314, 329, 547, 643
FalI AAGNNNNNCTT 4 cut(s) 407, 439, 494, 526
FaqI GGGAC 1 cut(s) 641
FatI CATG 6 cut(s) 124, 288, 310, 325, 543, 639
FblI GTMKAC 1 cut(s) 489
Fnu4HI GCNGC 2 cut(s) 41, 122
FokI GGATG 2 cut(s) 535, 656
Fsp4HI GCNGC 2 cut(s) 41, 122
FspBI CTAG 6 cut(s) 272, 429, 516, 596, 609, 694
GluI GCNGC 2 cut(s) 41, 122
HaeIII GGCC 1 cut(s) 247
Hin1II CATG 6 cut(s) 128, 292, 314, 329, 547, 643
HindIII AAGCTT 2 cut(s) 220, 434
HinfI GANTC 3 cut(s) 188, 213, 486
HphI GGTGA 2 cut(s) 188, 290
Hpy166II GTNNAC 1 cut(s) 490
Hpy188I TCNGA 2 cut(s) 255, 381
Hpy188III TCNNGA 2 cut(s) 50, 475
Hpy8I GTNNAC 1 cut(s) 490
HpyAV CCTTC 1 cut(s) 250
HpyCH4III ACNGT 2 cut(s) 586, 651
HpyCH4IV ACGT 1 cut(s) 319
HpyCH4V TGCA 8 cut(s) 40, 88, 310, 344, 376, 401, 446, 664
HpyF3I CTNAG 5 cut(s) 242, 335, 389, 634, 685
HpySE526I ACGT 1 cut(s) 319
Hsp92II CATG 6 cut(s) 128, 292, 314, 329, 547, 643
Kzo9I GATC 2 cut(s) 314, 598
LguI GCTCTTC 1 cut(s) 105
LmnI GCTCC 1 cut(s) 369
LpnPI CCDG 8 cut(s) 82, 98, 195, 287, 314, 335, 374, 460
Lsp1109I GCAGC 2 cut(s) 52, 133
LweI GCATC 2 cut(s) 385, 557
MaeI CTAG 6 cut(s) 272, 429, 516, 596, 609, 694
MaeII ACGT 1 cut(s) 319
MaeIII GTNAC 2 cut(s) 320, 671
MalI GATC 2 cut(s) 316, 600
MboI GATC 2 cut(s) 314, 598
MboII GAAGA 4 cut(s) 92, 287, 424, 602
MfeI CAATTG 1 cut(s) 615
MflI RGATCY 1 cut(s) 598
MhlI GDGCHC 1 cut(s) 100
MluCI AATT 4 cut(s) 45, 178, 505, 615
MlyI GAGTC 2 cut(s) 207, 495
MmeI TCCRAC 2 cut(s) 391, 399
MnlI CCTC 3 cut(s) 261, 273, 670
MroXI GAANNNNTTC 1 cut(s) 192
MseI TTAA 2 cut(s) 60, 116
MslI CAYNNNNRTG 2 cut(s) 93, 201
MspR9I CCNGG 1 cut(s) 302
MunI CAATTG 1 cut(s) 615
MvaI CCWGG 1 cut(s) 302
NcoI CCATGG 2 cut(s) 543, 639
NdeII GATC 2 cut(s) 314, 598
NheI GCTAGC 1 cut(s) 428
NlaIII CATG 6 cut(s) 128, 292, 314, 329, 547, 643
NlaIV GGNNCC 1 cut(s) 67
NspI RCATGY 1 cut(s) 292
OliI CACNNNNGTG 1 cut(s) 93
PciI ACATGT 1 cut(s) 288
PciSI GCTCTTC 1 cut(s) 105
PdmI GAANNNNTTC 1 cut(s) 192
PfeI GAWTC 1 cut(s) 188
PkrI GCNGC 2 cut(s) 42, 123
PleI GAGTC 2 cut(s) 207, 494
PpsI GAGTC 2 cut(s) 207, 494
Ppu21I YACGTR 1 cut(s) 320
PscI ACATGT 1 cut(s) 288
PsiI TTATAA 1 cut(s) 132
Psp6I CCWGG 1 cut(s) 300
PspGI CCWGG 1 cut(s) 300
PspN4I GGNNCC 1 cut(s) 67
PstNI CAGNNNCTG 1 cut(s) 307
PsuI RGATCY 1 cut(s) 598
RsaI GTAC 1 cut(s) 227
RsaNI GTAC 1 cut(s) 226
RseI CAYNNNNRTG 2 cut(s) 93, 201
SapI GCTCTTC 1 cut(s) 105
SaqAI TTAA 2 cut(s) 60, 116
SatI GCNGC 2 cut(s) 41, 122
Sau3AI GATC 2 cut(s) 314, 598
SchI GAGTC 2 cut(s) 207, 495
ScrFI CCNGG 1 cut(s) 302
SduI GDGCHC 1 cut(s) 100
SetI ASST 9 cut(s) 60, 71, 87, 224, 322, 351, 363, 407, 438
SfaNI GCATC 2 cut(s) 385, 557
SmiMI CAYNNNNRTG 2 cut(s) 93, 201
Sse9I AATT 4 cut(s) 45, 178, 505, 615
SspMI CTAG 6 cut(s) 272, 429, 516, 596, 609, 694
StyD4I CCNGG 1 cut(s) 300
StyI CCWWGG 2 cut(s) 543, 639
TaaI ACNGT 2 cut(s) 586, 651
TaiI ACGT 1 cut(s) 322
TaqI TCGA 2 cut(s) 588, 653
TasI AATT 4 cut(s) 45, 178, 505, 615
TfiI GAWTC 1 cut(s) 188
Tru1I TTAA 2 cut(s) 60, 116
Tru9I TTAA 2 cut(s) 60, 116
TscAI CASTG 1 cut(s) 589
TseI GCWGC 2 cut(s) 40, 121
TspDTI ATGAA 1 cut(s) 660
TspRI CASTG 1 cut(s) 589
XapI RAATTY 2 cut(s) 45, 178
XceI RCATGY 1 cut(s) 292
XcmI CCANNNNNNNNNTGG 1 cut(s) 308
XmiI GTMKAC 1 cut(s) 489
XmnI GAANNNNTTC 1 cut(s) 192
XspI CTAG 6 cut(s) 272, 429, 516, 596, 609, 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.