Prupe.4G238900_v2.0.a1

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Forward (+)
15686265 .. 15689651
3387 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G238900.1

Sequence Viewer

Length: 1575 bp
TTAGCTGCATCCCAAGCTCAAAGCCCGAATGCGACTCTTGATCATGTTAAGCGACGTTCAGCTAATTTCTCTTCCAGCACTTGGGGCGATTATTTTTTATCATATGCTTCAGTGAAAACAGATATCAAAGCAGAGCAAGATGTCCAAGAACTGAAGGAAAAAGTGAAGGGGATGATAATGGCTCCAATGCTTAAAAATCCATCAAAAAAATTGGAGTTAATTGATGAGATTCAGCGGTTTGGTGTCTCCCGCCATTTCGAAAATGAAGTTGAGGAAGTTTTGCAGCAAATTCACAAGAACTCTTACGGCGATGATGAAGAAAATGATTTTGACCTTTTCACAACTGCTCTCCGTTTCCGGTTGCTTAGACAGCAAGGTTACAAGGTTTCATGCGGAAAGGACGGGAAATTTAAGGAAACACTTGTGGATGATGTAGTAGGACTGTTGAGCTTGTACGAAGCCACACATCTTAGGATGCATGGAGAGGATTTACTGGATGAGGCGCTCACCTTCACCACAACTCATCTTGAGTCAGTGGAAGCACACCGTTTAAGCCCCTTGCTTGCAAAACAAGTAGCCCATGCCTTGCATCAACCATTCTGGAAGGGCTGCCAAAGGCCAGAAGCAAGGCGTTACTTGGCTATCTTTGAGGAGGAACCTCATCTGGCAAATGAAACTCTCCTAACTTTGGCAAAGTTGGATTTCAACCTAGTGCAGCAAGTCCATCAGAAAGAACTAAGTGAAATTTCAAGGTGGTGGAAGGATTTGGACTTTGTAAACAAGCTTCCTTTTGCAAGAGACAGAGTAGTTGAGTGCTACTTTTGGGCTATGGGAACCTACTTTGAGCCCCAATATTGCTTTGCTAGGACATCATTAAGCAAAGTTATTGCTGTGATAACCGCTATTGATGACATTTATGATGTGCATGGCACACAAGAGGAGCTAGAGCTCTTTACTGAAGCTGTTGAAAGGTGGGACATTTCAGCTATGGACCAACTGCCAGAGTATATGAAAGTCTGTTATGGAGGAATGTTGGATGTATACACTGAAATCGAAGAAAAGCTTGGAAAAGAGGGAAATTTATATCGCATCCACTATGCGAGGGAAGCAATGAAATGTCATGTTAGAGGTTACTTTGATGAAGTCAAATGGCTCCACCAGAAATACACACCAACAATGGATGAATATATGGCAGTAGCACTGACTACATCCTACAAGATGCCATTAACCACGTACTTTATTGGAATGGGAGATATTGTCACAAAAGAGTCCTTGGATTGGGTTCTCAGTGACCCTAAGATTGTGAACTCTTTATTAATACTTGGCAGACTCATGGGTGACATGAAGTCCCATAAGTTTGAACAAAAGAGAGGACATATTGCCTCAGCTGCATGGAAGGACATAAATGAAGAGTGGATCAACCTCACCACCATCCCTATGCCACTACGATTGAGAATTCTGAATTTTGCACGTACTAATGAACTTCTGTACAAGCATACAGATGGCTTTACTCACGCTGGAGTTGTGCTTAAGGATCTTCTGGTGTCTCTGTTTGTCAACCCTGTGGCCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

525

Amino Acids

60.6

Weight (kDa)

5.67

Isoelectric Point (pI)

43.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 81
AccI GTMKAC 1 cut(s) 1041
AciI CCGC 4 cut(s) 235, 250, 393, 900
AclWI GGATC 2 cut(s) 1424, 1542
AcoI YGGCCR 1 cut(s) 1566
AcsI RAATTY 6 cut(s) 288, 407, 744, 1078, 1455, 1462
AcuI CTGAAG 3 cut(s) 93, 173, 978
AfaI GTAC 4 cut(s) 455, 1235, 1474, 1490
AfiI CCNNNNNNNGG 3 cut(s) 81, 688, 1278
AflII CTTAAG 1 cut(s) 1529
AgsI TTSAA 4 cut(s) 706, 750, 968, 1361
AhdI GACNNNNNGTC 1 cut(s) 1345
AjuI GAANNNNNNNTTGG 2 cut(s) 1047, 1079
Alw21I GWGCWC 1 cut(s) 951
Alw26I GTCTC 3 cut(s) 250, 792, 1551
AlwI GGATC 2 cut(s) 1424, 1542
AoxI GGCC 2 cut(s) 617, 1566
ApeKI GCWGC 5 cut(s) 5, 283, 609, 715, 1388
ApoI RAATTY 6 cut(s) 288, 407, 744, 1078, 1455, 1462
AseI ATTAAT 1 cut(s) 1316
AspLEI GCGC 1 cut(s) 505
AspS9I GGNCC 1 cut(s) 991
AsuHPI GGTGA 4 cut(s) 499, 505, 1349, 1417
AsuII TTCGAA 1 cut(s) 258
AvaII GGWCC 1 cut(s) 991
BalI TGGCCA 1 cut(s) 1568
BanII GRGCYC 2 cut(s) 849, 951
BarI GAAGNNNNNNTAC 2 cut(s) 768, 800
Bbv12I GWGCWC 1 cut(s) 951
BbvCI CCTCAGC 1 cut(s) 1384
BbvI GCAGC 4 cut(s) 295, 596, 727, 1375
BccI CCATC 4 cut(s) 208, 732, 1439, 1496
BceAI ACGGC 1 cut(s) 322
BclI TGATCA 1 cut(s) 40
BcoDI GTCTC 3 cut(s) 250, 792, 1551
BfaI CTAG 3 cut(s) 710, 864, 944
BfoI RGCGCY 1 cut(s) 506
BfrI CTTAAG 1 cut(s) 1529
BisI GCNGC 5 cut(s) 6, 284, 610, 716, 1389
BlsI GCNGC 5 cut(s) 7, 285, 611, 717, 1390
Bme18I GGWCC 1 cut(s) 991
BmeRI GACNNNNNGTC 1 cut(s) 1345
BmgT120I GGNCC 1 cut(s) 991
BmiI GGNNCC 4 cut(s) 183, 657, 835, 1154
BmsI GCATC 5 cut(s) 17, 465, 598, 1098, 1209
BpmI CTGGAG 1 cut(s) 1539
Bpu10I CCTNAGC 1 cut(s) 1384
Bpu14I TTCGAA 1 cut(s) 258
BpuEI CTTGAG 1 cut(s) 548
BsaAI YACGTR 2 cut(s) 1233, 1472
BsaJI CCNNGG 1 cut(s) 1272
BsaWI WCCGGW 1 cut(s) 357
BsaXI ACNNNNNCTCC 2 cut(s) 1242, 1272
Bsc4I CCNNNNNNNGG 3 cut(s) 81, 688, 1278
Bse1I ACTGG 1 cut(s) 498
Bse3DI GCAATG 1 cut(s) 1116
BseDI CCNNGG 1 cut(s) 1272
BseLI CCNNNNNNNGG 3 cut(s) 81, 688, 1278
BseMI GCAATG 1 cut(s) 1116
BseMII CTCAG 2 cut(s) 1300, 1398
BseNI ACTGG 1 cut(s) 498
BseRI GAGGAG 2 cut(s) 665, 953
BseXI GCAGC 4 cut(s) 295, 596, 727, 1375
BsgI GTGCAG 1 cut(s) 734
BshFI GGCC 2 cut(s) 619, 1568
BsiHKAI GWGCWC 1 cut(s) 951
BsiSI CCGG 1 cut(s) 358
BslFI GGGAC 2 cut(s) 989, 1333
BslI CCNNNNNNNGG 3 cut(s) 81, 688, 1278
BsmAI GTCTC 3 cut(s) 250, 792, 1551
BsmFI GGGAC 2 cut(s) 989, 1333
BsmI GAATGC 1 cut(s) 34
BsnI GGCC 2 cut(s) 619, 1568
Bsp119I TTCGAA 1 cut(s) 258
Bsp1286I GDGCHC 2 cut(s) 849, 951
Bsp1407I TGTACA 1 cut(s) 1488
Bsp143I GATC 3 cut(s) 40, 1416, 1534
BspACI CCGC 4 cut(s) 235, 250, 393, 900
BspANI GGCC 2 cut(s) 619, 1568
BspCNI CTCAG 2 cut(s) 1299, 1397
BspLI GGNNCC 4 cut(s) 183, 657, 835, 1154
BspPI GGATC 2 cut(s) 1424, 1542
BspT104I TTCGAA 1 cut(s) 258
BspTI CTTAAG 1 cut(s) 1529
BsrDI GCAATG 1 cut(s) 1116
BsrGI TGTACA 1 cut(s) 1488
BsrI ACTGG 1 cut(s) 498
BssECI CCNNGG 1 cut(s) 1272
BssMI GATC 3 cut(s) 40, 1416, 1534
BssNAI GTATAC 1 cut(s) 1042
BssT1I CCWWGG 1 cut(s) 1272
Bst1107I GTATAC 1 cut(s) 1042
Bst4CI ACNGT 2 cut(s) 444, 548
Bst6I CTCTTC 2 cut(s) 76, 1404
BstAFI CTTAAG 1 cut(s) 1529
BstAUI TGTACA 1 cut(s) 1488
BstBAI YACGTR 2 cut(s) 1233, 1472
BstBI TTCGAA 1 cut(s) 258
BstC8I GCNNGC 1 cut(s) 564
BstDEI CTNAG 6 cut(s) 365, 470, 737, 1286, 1296, 1384
BstH2I RGCGCY 1 cut(s) 506
BstHHI GCGC 1 cut(s) 505
BstKTI GATC 3 cut(s) 43, 1419, 1537
BstMAI GTCTC 3 cut(s) 250, 792, 1551
BstMBI GATC 3 cut(s) 40, 1416, 1534
BstMWI GCNNNNNNNGC 5 cut(s) 14, 84, 370, 1106, 1388
BstV1I GCAGC 4 cut(s) 295, 596, 727, 1375
BstX2I RGATCY 1 cut(s) 1534
BstYI RGATCY 1 cut(s) 1534
BstZ17I GTATAC 1 cut(s) 1042
BsuRI GGCC 2 cut(s) 619, 1568
BtgZI GCGATG 1 cut(s) 324
BtsIMutI CAGTG 5 cut(s) 117, 540, 1044, 1199, 1294
Cac8I GCNNGC 1 cut(s) 564
CfoI GCGC 1 cut(s) 505
Cfr13I GGNCC 1 cut(s) 991
Csp6I GTAC 4 cut(s) 454, 1234, 1473, 1489
CspCI CAANNNNNGTGG 2 cut(s) 1431, 1466
CviAII CATG 9 cut(s) 44, 390, 479, 581, 926, 1121, 1333, 1342, 1392
CviQI GTAC 4 cut(s) 454, 1234, 1473, 1489
DdeI CTNAG 6 cut(s) 365, 470, 737, 1286, 1296, 1384
DpnI GATC 3 cut(s) 42, 1418, 1536
DpnII GATC 3 cut(s) 40, 1416, 1534
DriI GACNNNNNGTC 1 cut(s) 1345
EaeI YGGCCR 1 cut(s) 1566
Eam1104I CTCTTC 2 cut(s) 76, 1404
Eam1105I GACNNNNNGTC 1 cut(s) 1345
EarI CTCTTC 2 cut(s) 76, 1404
Ecl136II GAGCTC 1 cut(s) 949
Eco130I CCWWGG 1 cut(s) 1272
Eco24I GRGCYC 2 cut(s) 849, 951
Eco32I GATATC 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 991
Eco53kI GAGCTC 1 cut(s) 949
Eco57I CTGAAG 3 cut(s) 93, 173, 978
EcoICRI GAGCTC 1 cut(s) 949
EcoRI GAATTC 1 cut(s) 1455
EcoRV GATATC 1 cut(s) 124
EcoT14I CCWWGG 1 cut(s) 1272
EcoT22I ATGCAT 1 cut(s) 480
EcoT38I GRGCYC 2 cut(s) 849, 951
ErhI CCWWGG 1 cut(s) 1272
FaeI CATG 9 cut(s) 47, 393, 482, 584, 929, 1124, 1336, 1345, 1395
FalI AAGNNNNNCTT 2 cut(s) 1047, 1079
FaqI GGGAC 2 cut(s) 989, 1333
FatI CATG 9 cut(s) 43, 389, 478, 580, 925, 1120, 1332, 1341, 1391
FauI CCCGC 1 cut(s) 257
FauNDI CATATG 1 cut(s) 103
FbaI TGATCA 1 cut(s) 40
FblI GTMKAC 1 cut(s) 1041
Fnu4HI GCNGC 5 cut(s) 6, 284, 610, 716, 1389
FokI GGATG 9 cut(s) 184, 440, 487, 509, 1049, 1076, 1193, 1195, 1418
FriOI GRGCYC 2 cut(s) 849, 951
Fsp4HI GCNGC 5 cut(s) 6, 284, 610, 716, 1389
FspBI CTAG 3 cut(s) 710, 864, 944
GlaI GCGC 1 cut(s) 504
GluI GCNGC 5 cut(s) 6, 284, 610, 716, 1389
GsuI CTGGAG 1 cut(s) 1539
HaeII RGCGCY 1 cut(s) 506
HaeIII GGCC 2 cut(s) 619, 1568
HapII CCGG 1 cut(s) 358
HhaI GCGC 1 cut(s) 505
Hin1II CATG 9 cut(s) 47, 393, 482, 584, 929, 1124, 1336, 1345, 1395
Hin6I GCGC 1 cut(s) 503
HinP1I GCGC 1 cut(s) 503
HincII GTYRAC 1 cut(s) 1558
HindII GTYRAC 1 cut(s) 1558
HindIII AAGCTT 2 cut(s) 782, 1061
HinfI GANTC 5 cut(s) 34, 229, 530, 1268, 1329
HpaII CCGG 1 cut(s) 358
HphI GGTGA 4 cut(s) 499, 505, 1349, 1417
Hpy166II GTNNAC 4 cut(s) 778, 1042, 1306, 1558
Hpy188I TCNGA 2 cut(s) 729, 1461
Hpy188III TCNNGA 3 cut(s) 38, 527, 601
Hpy8I GTNNAC 4 cut(s) 778, 1042, 1306, 1558
Hpy99I CGWCG 1 cut(s) 57
HpyAV CCTTC 6 cut(s) 148, 160, 520, 598, 754, 1390
HpyCH4III ACNGT 2 cut(s) 444, 548
HpyCH4IV ACGT 3 cut(s) 55, 1232, 1471
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 84, 370, 1106, 1388
HpyF3I CTNAG 6 cut(s) 365, 470, 737, 1286, 1296, 1384
HpySE526I ACGT 3 cut(s) 55, 1232, 1471
Hsp92II CATG 9 cut(s) 47, 393, 482, 584, 929, 1124, 1336, 1345, 1395
HspAI GCGC 1 cut(s) 503
Ksp22I TGATCA 1 cut(s) 40
Kzo9I GATC 3 cut(s) 40, 1416, 1534
LmnI GCTCC 3 cut(s) 187, 940, 1158
Lsp1109I GCAGC 4 cut(s) 295, 596, 727, 1375
LweI GCATC 5 cut(s) 17, 465, 598, 1098, 1209
MaeI CTAG 3 cut(s) 710, 864, 944
MaeII ACGT 3 cut(s) 55, 1232, 1471
MaeIII GTNAC 6 cut(s) 377, 632, 1130, 1258, 1289, 1337
MalI GATC 3 cut(s) 42, 1418, 1536
MboI GATC 3 cut(s) 40, 1416, 1534
MboII GAAGA 5 cut(s) 63, 329, 1067, 1421, 1529
MflI RGATCY 1 cut(s) 1534
MhlI GDGCHC 2 cut(s) 849, 951
MlsI TGGCCA 1 cut(s) 1568
MluCI AATT 9 cut(s) 64, 209, 219, 288, 407, 744, 1078, 1455, 1462
MluNI TGGCCA 1 cut(s) 1568
MlyI GAGTC 4 cut(s) 28, 539, 1277, 1323
MmeI TCCRAC 2 cut(s) 678, 1014
Mox20I TGGCCA 1 cut(s) 1568
Mph1103I ATGCAT 1 cut(s) 480
MscI TGGCCA 1 cut(s) 1568
MseI TTAA 9 cut(s) 48, 192, 218, 411, 551, 875, 1226, 1316, 1530
MslI CAYNNNNRTG 2 cut(s) 1436, 1500
Msp20I TGGCCA 1 cut(s) 1568
MspA1I CMGCKG 2 cut(s) 235, 1388
MspCI CTTAAG 1 cut(s) 1529
MspI CCGG 1 cut(s) 358
Mva1269I GAATGC 1 cut(s) 34
MwoI GCNNNNNNNGC 5 cut(s) 14, 84, 370, 1106, 1388
NdeI CATATG 1 cut(s) 103
NdeII GATC 3 cut(s) 40, 1416, 1534
NlaIII CATG 9 cut(s) 47, 393, 482, 584, 929, 1124, 1336, 1345, 1395
NlaIV GGNNCC 4 cut(s) 183, 657, 835, 1154
NmuCI GTSAC 3 cut(s) 1258, 1289, 1337
NsiI ATGCAT 1 cut(s) 480
NspV TTCGAA 1 cut(s) 258
PctI GAATGC 1 cut(s) 34
PfeI GAWTC 1 cut(s) 229
PflMI CCANNNNNTGG 1 cut(s) 81
PkrI GCNGC 5 cut(s) 7, 285, 611, 717, 1390
PleI GAGTC 4 cut(s) 28, 538, 1276, 1323
PpsI GAGTC 4 cut(s) 28, 538, 1276, 1323
Ppu21I YACGTR 2 cut(s) 1233, 1472
PshBI ATTAAT 1 cut(s) 1316
Psp124BI GAGCTC 1 cut(s) 951
PspN4I GGNNCC 4 cut(s) 183, 657, 835, 1154
PspPI GGNCC 1 cut(s) 991
PsuI RGATCY 1 cut(s) 1534
PvuII CAGCTG 1 cut(s) 1388
RsaI GTAC 4 cut(s) 455, 1235, 1474, 1490
RsaNI GTAC 4 cut(s) 454, 1234, 1473, 1489
RseI CAYNNNNRTG 2 cut(s) 1436, 1500
SacI GAGCTC 1 cut(s) 951
SaqAI TTAA 9 cut(s) 48, 192, 218, 411, 551, 875, 1226, 1316, 1530
SatI GCNGC 5 cut(s) 6, 284, 610, 716, 1389
Sau3AI GATC 3 cut(s) 40, 1416, 1534
Sau96I GGNCC 1 cut(s) 991
SchI GAGTC 4 cut(s) 28, 539, 1277, 1323
SduI GDGCHC 2 cut(s) 849, 951
SfaNI GCATC 5 cut(s) 17, 465, 598, 1098, 1209
SfuI TTCGAA 1 cut(s) 258
SinI GGWCC 1 cut(s) 991
SmiMI CAYNNNNRTG 2 cut(s) 1436, 1500
SmlI CTYRAG 2 cut(s) 527, 1529
SmoI CTYRAG 2 cut(s) 527, 1529
Sse9I AATT 9 cut(s) 64, 209, 219, 288, 407, 744, 1078, 1455, 1462
SsiI CCGC 4 cut(s) 235, 250, 393, 900
SspI AATATT 1 cut(s) 854
SspMI CTAG 3 cut(s) 710, 864, 944
SstI GAGCTC 1 cut(s) 951
StyI CCWWGG 1 cut(s) 1272
TaaI ACNGT 2 cut(s) 444, 548
TaiI ACGT 3 cut(s) 58, 1235, 1474
TaqI TCGA 2 cut(s) 258, 1053
TasI AATT 9 cut(s) 64, 209, 219, 288, 407, 744, 1078, 1455, 1462
TatI WGTACW 1 cut(s) 1488
TfiI GAWTC 1 cut(s) 229
Tru1I TTAA 9 cut(s) 48, 192, 218, 411, 551, 875, 1226, 1316, 1530
Tru9I TTAA 9 cut(s) 48, 192, 218, 411, 551, 875, 1226, 1316, 1530
TscAI CASTG 5 cut(s) 117, 540, 1051, 1206, 1294
TseFI GTSAC 3 cut(s) 1258, 1289, 1337
TseI GCWGC 5 cut(s) 5, 283, 609, 715, 1388
Tsp45I GTSAC 3 cut(s) 1258, 1289, 1337
TspGWI ACGGA 1 cut(s) 341
TspRI CASTG 5 cut(s) 117, 540, 1051, 1206, 1294
Van91I CCANNNNNTGG 1 cut(s) 81
Vha464I CTTAAG 1 cut(s) 1529
VpaK11BI GGWCC 1 cut(s) 991
VspI ATTAAT 1 cut(s) 1316
XapI RAATTY 6 cut(s) 288, 407, 744, 1078, 1455, 1462
XmiI GTMKAC 1 cut(s) 1041
XspI CTAG 3 cut(s) 710, 864, 944
Zsp2I ATGCAT 1 cut(s) 480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.