Prupe.4G194600_v2.0.a1

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Forward (+)
11828247 .. 11831673
3427 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G194600.1

Sequence Viewer

Length: 1413 bp
ATGTCATCGAGTTCAGTCATAATCAACTCTTTTACAACAAGATCAATGCCAAGGAGGTGGTTTGGAGATTCAACTATGTCGTCAAAGCTCAACTCTAGCTTTGCCCTTTGTCGAAGCTTACCTCTACCACTCAGCCCAAATTTTTTCTATAAACAAAAAAGAGCGGCAAACTTTCATCCAAGCATTTGGGGAGATCGGTTCATCAACTACGATTATTCCAATGACAATATAACTCATGTGCATGACAAGCAGGTAGACGAACTAAAAGAAATGGTGAGGAGGGAAGTGTTCATAAGTCTTAATGCTGCAGGTGATGATGGTTTTGCGCATCAGCTCAAGTTAATTGATGCAATCCAGCGTCTTGGTGTGGCATACCATTTTGAAAGAGAGATTGAAGAAGCACTGGAACGTATACATGGTGCGTATCATGACCATGCTATTAATGATGATGATGATGGTGATCTGTACAATGTTGCTCTTGGCTTTCGCCTACTGAGGCAGCATGGATATAATGTTTCATGTGATATGTTCAACAAGTTCAAAGATGCAAATGGTAATTTCATAGTTGTTGACGTGTCGGGTATGCTAAGCCTTTATGAAGCCACACATCTAAGGGTGCATGGAGAATATATACTAGAAGAGGCTTTTGCTTTCACCACCACTCAACTTATTGAATCCAAAACAACCCATGCAACGTATTCACTGGCAGCACAAATAACTCAAGCCTTGGAGAGACCTCTGCTAAAAAGTCCAGAGAGGTTAGCTGCCAGGAATTACATGTCAATCTACCAAGATGAAGCTTCACATAATGACGCTGTAATAGAACTTGCAAAGTTCGATTTCAATCTTGTTCAGTCTTTGCACAAAAAGGAGCTCAGCGAGATTATTGGGTGGTGGAAAGAAGTCGACTTTGAAAGGAAGCTGCCTTTTGCAAGACACTGGGTAGTGGAATCGTACCTTTGTACAACGGCAGTATATTTTGAACCGCAATATTCTGCCGCAAGAAAAATTCTAAGCAAAGCCATGGTCCTGTTTATAGTGATGGATGATATATATGATGAATTTGGTACATTCGAAGAACTCGAGATCCTTACAGAAGCGATTAGGAGGTGGGATATCAATTGCATGGATGAACTGCCAGATTATATGCAAATATTTTTTCATACACTGTTGAATCTTTTCAATGAAATTGAGGAAGAGATGGTGAAGGAAGGAAATTCATGCAGAGTTCACTACGCAAAAGAAGCTGTATGTAGATTCATAGTTAGCATAGCTTTTATTAGTTGCACCTTCAACCGTTACAAATGCAGCTGTAACAGCTGCAGATCATGCACCTTCAACCGTTACAAATGCAGCTGTAACAGCTGCAGATCACCCATGATATTAGCACCAGCTGTAGTCTCTCCTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

471

Amino Acids

54.33

Weight (kDa)

5.67

Isoelectric Point (pI)

60.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 299
Acc16I TGCGCA 1 cut(s) 327
Acc36I ACCTGC 2 cut(s) 241, 299
AccBSI CCGCTC 1 cut(s) 164
AccI GTMKAC 3 cut(s) 255, 412, 906
AciI CCGC 3 cut(s) 164, 986, 999
AclWI GGATC 1 cut(s) 1081
AcsI RAATTY 4 cut(s) 139, 1008, 1061, 1216
AfaI GTAC 4 cut(s) 467, 956, 964, 1069
AflIII ACRYGT 2 cut(s) 573, 777
AjiI CACGTC 1 cut(s) 574
AjnI CCWGG 1 cut(s) 767
AloI GAACNNNNNNTCC 2 cut(s) 1071, 1103
Alw21I GWGCWC 1 cut(s) 876
Alw26I GTCTC 2 cut(s) 727, 1405
AlwI GGATC 1 cut(s) 1081
Ama87I CYCGRG 1 cut(s) 1082
ApeKI GCWGC 9 cut(s) 305, 499, 707, 764, 922, 1308, 1320, 1353, 1365
ApoI RAATTY 4 cut(s) 139, 1008, 1061, 1216
ArsI GACNNNNNNTTYG 2 cut(s) 1011, 1043
AseI ATTAAT 1 cut(s) 441
Asp700I GAANNNNTTC 1 cut(s) 1178
AspLEI GCGC 1 cut(s) 328
AspS9I GGNCC 1 cut(s) 1027
AsuHPI GGTGA 6 cut(s) 286, 323, 470, 646, 1216, 1365
AsuII TTCGAA 1 cut(s) 1074
AvaI CYCGRG 1 cut(s) 1082
AvaII GGWCC 1 cut(s) 1027
BanII GRGCYC 1 cut(s) 876
Bbv12I GWGCWC 1 cut(s) 876
BbvI GCAGC 9 cut(s) 292, 511, 719, 751, 909, 1307, 1320, 1352, 1365
BccI CCATC 4 cut(s) 311, 449, 1036, 1195
BceAI ACGGC 1 cut(s) 984
BciT130I CCWGG 1 cut(s) 769
BcoDI GTCTC 2 cut(s) 727, 1405
BfaI CTAG 2 cut(s) 96, 635
BfmI CTRYAG 4 cut(s) 306, 1321, 1366, 1395
BfuAI ACCTGC 2 cut(s) 241, 299
BlpI GCTNAGC 2 cut(s) 587, 875
Bme1390I CCNGG 1 cut(s) 769
Bme18I GGWCC 1 cut(s) 1027
BmeT110I CYCGRG 1 cut(s) 1082
BmgBI CACGTC 1 cut(s) 574
BmgT120I GGNCC 1 cut(s) 1027
BmrFI CCNGG 1 cut(s) 769
BmrI ACTGGG 1 cut(s) 949
BmsI GCATC 3 cut(s) 337, 337, 535
BmuI ACTGGG 1 cut(s) 949
Bpu1102I GCTNAGC 2 cut(s) 587, 875
Bpu14I TTCGAA 1 cut(s) 1074
BpuEI CTTGAG 2 cut(s) 320, 705
BsaBI GATNNNNATC 2 cut(s) 459, 843
BsaI GGTCTC 1 cut(s) 727
BsaJI CCNNGG 3 cut(s) 50, 726, 1023
Bse1I ACTGG 3 cut(s) 408, 708, 944
Bse8I GATNNNNATC 2 cut(s) 459, 843
BseBI CCWGG 1 cut(s) 769
BseDI CCNNGG 3 cut(s) 50, 726, 1023
BseGI GGATG 3 cut(s) 175, 1051, 1135
BseJI GATNNNNATC 2 cut(s) 459, 843
BseMII CTCAG 3 cut(s) 145, 485, 889
BseNI ACTGG 3 cut(s) 408, 708, 944
BseRI GAGGAG 1 cut(s) 292
BseXI GCAGC 9 cut(s) 292, 511, 719, 751, 909, 1307, 1320, 1352, 1365
BsiHKAI GWGCWC 1 cut(s) 876
BsiHKCI CYCGRG 1 cut(s) 1082
BsmAI GTCTC 2 cut(s) 727, 1405
Bso31I GGTCTC 1 cut(s) 727
BsoBI CYCGRG 1 cut(s) 1082
Bsp119I TTCGAA 1 cut(s) 1074
Bsp1286I GDGCHC 1 cut(s) 876
Bsp1407I TGTACA 2 cut(s) 465, 962
Bsp143I GATC 6 cut(s) 41, 193, 460, 1086, 1325, 1370
Bsp1720I GCTNAGC 2 cut(s) 587, 875
Bsp19I CCATGG 1 cut(s) 1023
BspACI CCGC 3 cut(s) 164, 986, 999
BspCNI CTCAG 3 cut(s) 144, 486, 888
BspHI TCATGA 1 cut(s) 427
BspMAI CTGCAG 3 cut(s) 310, 1325, 1370
BspMI ACCTGC 2 cut(s) 241, 299
BspPI GGATC 1 cut(s) 1081
BspT104I TTCGAA 1 cut(s) 1074
BspTNI GGTCTC 1 cut(s) 727
BsrBI CCGCTC 1 cut(s) 164
BsrGI TGTACA 2 cut(s) 465, 962
BsrI ACTGG 3 cut(s) 408, 708, 944
BssECI CCNNGG 3 cut(s) 50, 726, 1023
BssMI GATC 6 cut(s) 41, 193, 460, 1086, 1325, 1370
BssNAI GTATAC 1 cut(s) 413
BssT1I CCWWGG 3 cut(s) 50, 726, 1023
Bst1107I GTATAC 1 cut(s) 413
Bst2UI CCWGG 1 cut(s) 769
Bst4CI ACNGT 3 cut(s) 1170, 1298, 1343
Bst6I CTCTTC 2 cut(s) 633, 1191
BstAPI GCANNNNNTGC 1 cut(s) 1329
BstAUI TGTACA 2 cut(s) 465, 962
BstBI TTCGAA 1 cut(s) 1074
BstDEI CTNAG 6 cut(s) 131, 494, 587, 611, 875, 1013
BstDSI CCRYGG 1 cut(s) 1023
BstF5I GGATG 3 cut(s) 175, 1051, 1135
BstHHI GCGC 1 cut(s) 328
BstKTI GATC 6 cut(s) 44, 196, 463, 1089, 1328, 1373
BstMAI GTCTC 2 cut(s) 727, 1405
BstMBI GATC 6 cut(s) 41, 193, 460, 1086, 1325, 1370
BstMWI GCNNNNNNNGC 5 cut(s) 247, 1244, 1317, 1329, 1362
BstNI CCWGG 1 cut(s) 769
BstNSI RCATGY 1 cut(s) 781
BstSCI CCNGG 1 cut(s) 767
BstSFI CTRYAG 4 cut(s) 306, 1321, 1366, 1395
BstV1I GCAGC 9 cut(s) 292, 511, 719, 751, 909, 1307, 1320, 1352, 1365
BstX2I RGATCY 1 cut(s) 1086
BstXI CCANNNNNNTGG 3 cut(s) 57, 186, 362
BstYI RGATCY 1 cut(s) 1086
BstZ17I GTATAC 1 cut(s) 413
BtgI CCRYGG 1 cut(s) 1023
BtrI CACGTC 1 cut(s) 574
BtsCI GGATG 3 cut(s) 175, 1051, 1135
BtsIMutI CAGTG 4 cut(s) 401, 701, 937, 1166
BveI ACCTGC 2 cut(s) 241, 299
CciI TCATGA 1 cut(s) 427
CfoI GCGC 1 cut(s) 328
Cfr13I GGNCC 1 cut(s) 1027
CseI GACGC 2 cut(s) 347, 821
Csp6I GTAC 4 cut(s) 466, 955, 963, 1068
CviQI GTAC 4 cut(s) 466, 955, 963, 1068
DdeI CTNAG 6 cut(s) 131, 494, 587, 611, 875, 1013
DpnI GATC 6 cut(s) 43, 195, 462, 1088, 1327, 1372
DpnII GATC 6 cut(s) 41, 193, 460, 1086, 1325, 1370
Eam1104I CTCTTC 2 cut(s) 633, 1191
EarI CTCTTC 2 cut(s) 633, 1191
Ecl136II GAGCTC 1 cut(s) 874
Eco130I CCWWGG 3 cut(s) 50, 726, 1023
Eco24I GRGCYC 1 cut(s) 876
Eco31I GGTCTC 1 cut(s) 727
Eco32I GATATC 1 cut(s) 1117
Eco47I GGWCC 1 cut(s) 1027
Eco53kI GAGCTC 1 cut(s) 874
Eco88I CYCGRG 1 cut(s) 1082
EcoICRI GAGCTC 1 cut(s) 874
EcoRII CCWGG 1 cut(s) 767
EcoRV GATATC 1 cut(s) 1117
EcoT14I CCWWGG 3 cut(s) 50, 726, 1023
EcoT38I GRGCYC 1 cut(s) 876
ErhI CCWWGG 3 cut(s) 50, 726, 1023
FblI GTMKAC 3 cut(s) 255, 412, 906
FokI GGATG 3 cut(s) 162, 1058, 1142
FriOI GRGCYC 1 cut(s) 876
FspBI CTAG 2 cut(s) 96, 635
FspI TGCGCA 1 cut(s) 327
GlaI GCGC 1 cut(s) 327
HgaI GACGC 2 cut(s) 347, 821
HhaI GCGC 1 cut(s) 328
Hin6I GCGC 1 cut(s) 326
HinP1I GCGC 1 cut(s) 326
HincII GTYRAC 2 cut(s) 571, 907
HindII GTYRAC 2 cut(s) 571, 907
HindIII AAGCTT 2 cut(s) 115, 798
HinfI GANTC 5 cut(s) 68, 674, 950, 1174, 1257
HphI GGTGA 6 cut(s) 286, 323, 470, 646, 1216, 1365
Hpy166II GTNNAC 5 cut(s) 256, 413, 571, 907, 1231
Hpy188III TCNNGA 3 cut(s) 428, 752, 1084
Hpy8I GTNNAC 5 cut(s) 256, 413, 571, 907, 1231
HpyAV CCTTC 4 cut(s) 1201, 1205, 1300, 1345
HpyCH4III ACNGT 3 cut(s) 1170, 1298, 1343
HpyCH4IV ACGT 3 cut(s) 409, 573, 695
HpyF10VI GCNNNNNNNGC 5 cut(s) 247, 1244, 1317, 1329, 1362
HpyF3I CTNAG 6 cut(s) 131, 494, 587, 611, 875, 1013
HpySE526I ACGT 3 cut(s) 409, 573, 695
HspAI GCGC 1 cut(s) 326
Kzo9I GATC 6 cut(s) 41, 193, 460, 1086, 1325, 1370
LmnI GCTCC 1 cut(s) 871
Lsp1109I GCAGC 9 cut(s) 292, 511, 719, 751, 909, 1307, 1320, 1352, 1365
LweI GCATC 3 cut(s) 337, 337, 535
MaeI CTAG 2 cut(s) 96, 635
MaeII ACGT 3 cut(s) 409, 573, 695
MaeIII GTNAC 4 cut(s) 1298, 1313, 1343, 1358
MalI GATC 6 cut(s) 43, 195, 462, 1088, 1327, 1372
MbiI CCGCTC 1 cut(s) 164
MboI GATC 6 cut(s) 41, 193, 460, 1086, 1325, 1370
MboII GAAGA 4 cut(s) 407, 650, 1088, 1208
MfeI CAATTG 1 cut(s) 1120
MflI RGATCY 1 cut(s) 1086
MhlI GDGCHC 1 cut(s) 876
MluCI AATT 9 cut(s) 139, 342, 556, 772, 1008, 1061, 1120, 1188, 1216
MroXI GAANNNNTTC 1 cut(s) 1178
MseI TTAA 3 cut(s) 300, 341, 441
MslI CAYNNNNRTG 2 cut(s) 240, 432
MspA1I CMGCKG 5 cut(s) 1311, 1320, 1356, 1365, 1394
MspR9I CCNGG 1 cut(s) 769
MunI CAATTG 1 cut(s) 1120
MvaI CCWGG 1 cut(s) 769
MwoI GCNNNNNNNGC 5 cut(s) 247, 1244, 1317, 1329, 1362
NcoI CCATGG 1 cut(s) 1023
NdeII GATC 6 cut(s) 41, 193, 460, 1086, 1325, 1370
NsbI TGCGCA 1 cut(s) 327
NspI RCATGY 1 cut(s) 781
NspV TTCGAA 1 cut(s) 1074
PaeR7I CTCGAG 1 cut(s) 1082
PagI TCATGA 1 cut(s) 427
PaqCI CACCTGC 1 cut(s) 299
PciI ACATGT 1 cut(s) 777
PcsI WCGNNNNNNNCGW 1 cut(s) 1080
PdmI GAANNNNTTC 1 cut(s) 1178
PfeI GAWTC 5 cut(s) 68, 674, 950, 1174, 1257
PscI ACATGT 1 cut(s) 777
PshBI ATTAAT 1 cut(s) 441
Psp124BI GAGCTC 1 cut(s) 876
Psp6I CCWGG 1 cut(s) 767
PspGI CCWGG 1 cut(s) 767
PspPI GGNCC 1 cut(s) 1027
PstI CTGCAG 3 cut(s) 310, 1325, 1370
PsuI RGATCY 1 cut(s) 1086
PvuII CAGCTG 5 cut(s) 1311, 1320, 1356, 1365, 1394
RsaI GTAC 4 cut(s) 467, 956, 964, 1069
RsaNI GTAC 4 cut(s) 466, 955, 963, 1068
RseI CAYNNNNRTG 2 cut(s) 240, 432
SacI GAGCTC 1 cut(s) 876
SalI GTCGAC 1 cut(s) 905
SaqAI TTAA 3 cut(s) 300, 341, 441
Sau3AI GATC 6 cut(s) 41, 193, 460, 1086, 1325, 1370
Sau96I GGNCC 1 cut(s) 1027
ScrFI CCNGG 1 cut(s) 769
SduI GDGCHC 1 cut(s) 876
SfaNI GCATC 3 cut(s) 337, 337, 535
SfcI CTRYAG 4 cut(s) 306, 1321, 1366, 1395
Sfr274I CTCGAG 1 cut(s) 1082
SfuI TTCGAA 1 cut(s) 1074
SinI GGWCC 1 cut(s) 1027
SlaI CTCGAG 1 cut(s) 1082
SmiMI CAYNNNNRTG 2 cut(s) 240, 432
SmlI CTYRAG 3 cut(s) 335, 720, 1082
SmoI CTYRAG 3 cut(s) 335, 720, 1082
Sse9I AATT 9 cut(s) 139, 342, 556, 772, 1008, 1061, 1120, 1188, 1216
SsiI CCGC 3 cut(s) 164, 986, 999
SspI AATATT 2 cut(s) 992, 1155
SspMI CTAG 2 cut(s) 96, 635
SstI GAGCTC 1 cut(s) 876
StyD4I CCNGG 1 cut(s) 767
StyI CCWWGG 3 cut(s) 50, 726, 1023
TaaI ACNGT 3 cut(s) 1170, 1298, 1343
TaiI ACGT 3 cut(s) 412, 576, 698
TaqI TCGA 6 cut(s) 8, 112, 837, 906, 1074, 1083
TasI AATT 9 cut(s) 139, 342, 556, 772, 1008, 1061, 1120, 1188, 1216
TatI WGTACW 2 cut(s) 465, 962
TauI GCSGC 2 cut(s) 167, 1001
TfiI GAWTC 5 cut(s) 68, 674, 950, 1174, 1257
Tru1I TTAA 3 cut(s) 300, 341, 441
Tru9I TTAA 3 cut(s) 300, 341, 441
TscAI CASTG 4 cut(s) 408, 708, 944, 1173
TseI GCWGC 9 cut(s) 305, 499, 707, 764, 922, 1308, 1320, 1353, 1365
TspRI CASTG 4 cut(s) 408, 708, 944, 1173
VpaK11BI GGWCC 1 cut(s) 1027
VspI ATTAAT 1 cut(s) 441
XapI RAATTY 4 cut(s) 139, 1008, 1061, 1216
XceI RCATGY 1 cut(s) 781
XhoI CTCGAG 1 cut(s) 1082
XmiI GTMKAC 3 cut(s) 255, 412, 906
XmnI GAANNNNTTC 1 cut(s) 1178
XspI CTAG 2 cut(s) 96, 635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.