Rmu_sc0007576.1_g000002

(-)-germacrene D synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007576.1
OG0000053
Physical Location & Seq
Reverse (-)
17215 .. 20886
3672 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007576.1_g000002.1.cds

Sequence Viewer

Length: 1392 bp
atgctaatggatcccgttaaaaaaccttcacaacaattggacttggttgattacattcaacgcctaggtgtgtcctatcattttgaaactgagatcgatggaattttgaaacaaattcaccacaactactcaaatggtagtgatgatgacctttacacaactgctctcatttttcggctacttagacaacaaggttatagcgtttcatgcgatatgttcaacaaattcagggaaggaaatgatcagaaattcaaggcatctcttctaagtgatgtatcaggactattaagcttgtacgaagccacccatcttaggatacgcggagaagacctacttgaagaggcactagacttcaccaccactcatcttgagtcgatcaaacacagtttaagcccttcactttcgaaacaagtagtccattccttaaatcaggcacttcggaggggcatcccgagggtggaagcaagatattacttgtcaatctacgcagaacacgattcacataacgaaactctcctgacttttgcaaagttagatttcaacctactgcaacaagtccatcaaaaggaactatgtgaaattacaaggtggtggaaggacttggacgtcacaaacaagctgccgttcacaagagacagaattaccgaaatttacttcatttgggctttgtcagtgtacttcgaacctcaatatttctttgctaggaggacaacatgcaaagtcactgccatgatggctatccttgatgacatttatgatactcatggcacactcgaagaactagagctttttactgaagttattcacaggtgggatatctgtgccatagatccattgccagattatatgaaagtctgttataaggcattgttagaagtttatactgaaattgaaggaagagcttgcaaaggagggaaagttgtatcgaatccactatgccagagaagctgctaccctcaactaataacaacatcttttgttgcaatgggagatgttgctacacaagactccttccattggttggacacttatcccagggctgtaaaaggggctgcagtagttgctcgactcatggatgatatagcggaccacaagtttgaggaaaagagaggacatgttatctcagctgtgcagtgctacatgaatgaatgtggtgtcacagaagaagaagcaataactgtattgcgtagacaagtgagtgacgcatggaaggacatcaacgaatcattcatccttcctaatgctgtcccgaggccactactaacccgaattcttaattttgcatgtgccatggatgtttcatacaagtatgaagatggtttcactactcatcatgagactgtgctcaaggattttataatttctacgcttgtccaacccttgcctgtataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

463

Amino Acids

53.43

Weight (kDa)

5.46

Isoelectric Point (pI)

44.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 861, 1358
AasI GACNNNNNNGTC 1 cut(s) 605
AatII GACGTC 1 cut(s) 609
AccB7I CCANNNNNTGG 1 cut(s) 1021
AccI GTMKAC 1 cut(s) 1189
AccII CGCG 1 cut(s) 321
AciI CCGC 2 cut(s) 321, 1085
AclWI GGATC 3 cut(s) 5, 18, 824
AcsI RAATTY 6 cut(s) 102, 114, 224, 248, 648, 1269
AcuI CTGAAG 1 cut(s) 816
AcyI GRCGYC 1 cut(s) 606
AfaI GTAC 2 cut(s) 296, 677
AfiI CCNNNNNNNGG 5 cut(s) 312, 457, 565, 1017, 1021
AflIII ACRYGT 1 cut(s) 1114
AgsI TTSAA 8 cut(s) 59, 86, 109, 220, 253, 338, 541, 893
AjnI CCWGG 1 cut(s) 1034
AluBI AGCT 6 cut(s) 291, 619, 787, 902, 948, 1127
AluI AGCT 6 cut(s) 291, 619, 787, 902, 948, 1127
Alw21I GWGCWC 1 cut(s) 1347
Alw26I GTCTC 2 cut(s) 627, 1331
AlwI GGATC 3 cut(s) 5, 18, 824
Ama87I CYCGRG 2 cut(s) 451, 1249
AoxI GGCC 1 cut(s) 1253
ApeKI GCWGC 3 cut(s) 619, 948, 1052
ApoI RAATTY 6 cut(s) 102, 114, 224, 248, 648, 1269
ArsI GACNNNNNNTTYG 2 cut(s) 1079, 1111
Asp700I GAANNNNTTC 1 cut(s) 801
AspA2I CCTAGG 1 cut(s) 64
AspS9I GGNCC 1 cut(s) 1087
AsuHPI GGTGA 2 cut(s) 110, 346
AsuII TTCGAA 2 cut(s) 404, 681
AvaI CYCGRG 2 cut(s) 451, 1249
AvaII GGWCC 1 cut(s) 1087
AvrII CCTAGG 1 cut(s) 64
BamHI GGATCC 1 cut(s) 10
BbsI GAAGAC 1 cut(s) 333
Bbv12I GWGCWC 1 cut(s) 1347
BbvI GCAGC 3 cut(s) 606, 935, 1039
BccI CCATC 5 cut(s) 92, 315, 567, 727, 1310
BceAI ACGGC 1 cut(s) 607
BciT130I CCWGG 1 cut(s) 1036
BciVI GTATCC 1 cut(s) 309
BclI TGATCA 1 cut(s) 241
BcoDI GTCTC 2 cut(s) 627, 1331
BfaI CTAG 4 cut(s) 65, 347, 702, 782
BfmI CTRYAG 1 cut(s) 1053
BfuI GTATCC 1 cut(s) 309
BglI GCCNNNNNGGC 1 cut(s) 734
BisI GCNGC 3 cut(s) 620, 949, 1053
BlnI CCTAGG 1 cut(s) 64
BlsI GCNGC 3 cut(s) 621, 950, 1054
Bme1390I CCNGG 1 cut(s) 1036
Bme18I GGWCC 1 cut(s) 1087
BmeT110I CYCGRG 2 cut(s) 451, 1249
BmgT120I GGNCC 1 cut(s) 1087
BmiI GGNNCC 1 cut(s) 12
BmrFI CCNGG 1 cut(s) 1036
BmsI GCATC 2 cut(s) 266, 456
BpiI GAAGAC 1 cut(s) 333
Bpu14I TTCGAA 2 cut(s) 404, 681
BpuEI CTTGAG 2 cut(s) 389, 1331
Bsa29I ATCGAT 1 cut(s) 96
BsaBI GATNNNNATC 1 cut(s) 737
BsaHI GRCGYC 1 cut(s) 606
BsaJI CCNNGG 6 cut(s) 64, 452, 1034, 1035, 1250, 1290
BsaXI ACNNNNNCTCC 2 cut(s) 903, 933
Bsc4I CCNNNNNNNGG 5 cut(s) 312, 457, 565, 1017, 1021
Bse3DI GCAATG 2 cut(s) 833, 990
Bse8I GATNNNNATC 1 cut(s) 737
BseBI CCWGG 1 cut(s) 1036
BseCI ATCGAT 1 cut(s) 96
BseDI CCNNGG 6 cut(s) 64, 452, 1034, 1035, 1250, 1290
BseGI GGATG 4 cut(s) 447, 1081, 1230, 1300
BseJI GATNNNNATC 1 cut(s) 737
BseLI CCNNNNNNNGG 5 cut(s) 312, 457, 565, 1017, 1021
BseMI GCAATG 2 cut(s) 833, 990
BseMII CTCAG 2 cut(s) 81, 1137
BseXI GCAGC 3 cut(s) 606, 935, 1039
BsgI GTGCAG 1 cut(s) 1151
Bsh1236I CGCG 1 cut(s) 321
BshFI GGCC 1 cut(s) 1255
BshVI ATCGAT 1 cut(s) 96
BsiHKAI GWGCWC 1 cut(s) 1347
BsiHKCI CYCGRG 2 cut(s) 451, 1249
BslFI GGGAC 1 cut(s) 1232
BslI CCNNNNNNNGG 5 cut(s) 312, 457, 565, 1017, 1021
BsmAI GTCTC 2 cut(s) 627, 1331
BsmFI GGGAC 1 cut(s) 1232
BsnI GGCC 1 cut(s) 1255
BsoBI CYCGRG 2 cut(s) 451, 1249
Bsp119I TTCGAA 2 cut(s) 404, 681
Bsp1286I GDGCHC 1 cut(s) 1347
Bsp143I GATC 5 cut(s) 10, 93, 241, 375, 829
Bsp19I CCATGG 1 cut(s) 1290
BspACI CCGC 2 cut(s) 321, 1085
BspANI GGCC 1 cut(s) 1255
BspCNI CTCAG 2 cut(s) 82, 1136
BspDI ATCGAT 1 cut(s) 96
BspFNI CGCG 1 cut(s) 321
BspHI TCATGA 1 cut(s) 1333
BspLI GGNNCC 1 cut(s) 12
BspMAI CTGCAG 1 cut(s) 1057
BspPI GGATC 3 cut(s) 5, 18, 824
BspQI GCTCTTC 1 cut(s) 892
BspT104I TTCGAA 2 cut(s) 404, 681
BsrDI GCAATG 2 cut(s) 833, 990
BssECI CCNNGG 6 cut(s) 64, 452, 1034, 1035, 1250, 1290
BssMI GATC 5 cut(s) 10, 93, 241, 375, 829
BssNI GRCGYC 1 cut(s) 606
BssT1I CCWWGG 2 cut(s) 64, 1290
Bst2UI CCWGG 1 cut(s) 1036
Bst4CI ACNGT 3 cut(s) 386, 1180, 1342
Bst6I CTCTTC 3 cut(s) 267, 333, 892
BstACI GRCGYC 1 cut(s) 606
BstAPI GCANNNNNTGC 1 cut(s) 1061
BstBI TTCGAA 2 cut(s) 404, 681
BstC8I GCNNGC 1 cut(s) 904
BstDEI CTNAG 5 cut(s) 90, 182, 266, 311, 1123
BstDSI CCRYGG 1 cut(s) 1290
BstF5I GGATG 4 cut(s) 447, 1081, 1230, 1300
BstFNI CGCG 1 cut(s) 321
BstKTI GATC 5 cut(s) 13, 96, 244, 378, 832
BstMAI GTCTC 2 cut(s) 627, 1331
BstMBI GATC 5 cut(s) 10, 93, 241, 375, 829
BstMWI GCNNNNNNNGC 4 cut(s) 207, 734, 945, 1061
BstNI CCWGG 1 cut(s) 1036
BstNSI RCATGY 3 cut(s) 717, 1118, 1287
BstSCI CCNGG 1 cut(s) 1034
BstSFI CTRYAG 1 cut(s) 1053
BstUI CGCG 1 cut(s) 321
BstV1I GCAGC 3 cut(s) 606, 935, 1039
BstV2I GAAGAC 1 cut(s) 333
BstX2I RGATCY 2 cut(s) 10, 829
BstYI RGATCY 2 cut(s) 10, 829
Bsu15I ATCGAT 1 cut(s) 96
BsuI GTATCC 1 cut(s) 309
BsuRI GGCC 1 cut(s) 1255
BsuTUI ATCGAT 1 cut(s) 96
BtgI CCRYGG 1 cut(s) 1290
BtsCI GGATG 4 cut(s) 447, 1081, 1230, 1300
BtsI GCAGTG 2 cut(s) 723, 1139
BtsIMutI CAGTG 3 cut(s) 678, 723, 1139
Cac8I GCNNGC 1 cut(s) 904
CciI TCATGA 1 cut(s) 1333
Cfr13I GGNCC 1 cut(s) 1087
ClaI ATCGAT 1 cut(s) 96
CseI GACGC 1 cut(s) 1211
Csp6I GTAC 2 cut(s) 295, 676
CspCI CAANNNNNGTGG 2 cut(s) 349, 384
CviQI GTAC 2 cut(s) 295, 676
DdeI CTNAG 5 cut(s) 90, 182, 266, 311, 1123
DpnI GATC 5 cut(s) 12, 95, 243, 377, 831
DpnII GATC 5 cut(s) 10, 93, 241, 375, 829
DrdI GACNNNNNNGTC 1 cut(s) 605
DseDI GACNNNNNNGTC 1 cut(s) 605
Eam1104I CTCTTC 3 cut(s) 267, 333, 892
EarI CTCTTC 3 cut(s) 267, 333, 892
Eco130I CCWWGG 2 cut(s) 64, 1290
Eco32I GATATC 1 cut(s) 817
Eco47I GGWCC 1 cut(s) 1087
Eco57I CTGAAG 1 cut(s) 816
Eco88I CYCGRG 2 cut(s) 451, 1249
EcoRI GAATTC 1 cut(s) 1269
EcoRII CCWGG 1 cut(s) 1034
EcoRV GATATC 1 cut(s) 817
EcoT14I CCWWGG 2 cut(s) 64, 1290
ErhI CCWWGG 2 cut(s) 64, 1290
FalI AAGNNNNNCTT 2 cut(s) 318, 350
FaqI GGGAC 1 cut(s) 1232
FbaI TGATCA 1 cut(s) 241
FblI GTMKAC 1 cut(s) 1189
Fnu4HI GCNGC 3 cut(s) 620, 949, 1053
FokI GGATG 4 cut(s) 434, 1088, 1217, 1307
Fsp4HI GCNGC 3 cut(s) 620, 949, 1053
FspBI CTAG 4 cut(s) 65, 347, 702, 782
GluI GCNGC 3 cut(s) 620, 949, 1053
HaeIII GGCC 1 cut(s) 1255
HgaI GACGC 1 cut(s) 1211
Hin1I GRCGYC 1 cut(s) 606
HindIII AAGCTT 1 cut(s) 289
HinfI GANTC 6 cut(s) 371, 497, 928, 1007, 1068, 1223
HphI GGTGA 2 cut(s) 110, 346
Hpy166II GTNNAC 3 cut(s) 627, 676, 1190
Hpy188I TCNGA 2 cut(s) 246, 441
Hpy188III TCNNGA 6 cut(s) 279, 368, 451, 517, 1249, 1334
Hpy8I GTNNAC 3 cut(s) 627, 676, 1190
HpyAV CCTTC 8 cut(s) 36, 227, 405, 589, 887, 1021, 1204, 1244
HpyCH4III ACNGT 3 cut(s) 386, 1180, 1342
HpyCH4IV ACGT 1 cut(s) 606
HpyCH4V TGCA 8 cut(s) 527, 550, 717, 906, 983, 1055, 1132, 1283
HpyF10VI GCNNNNNNNGC 4 cut(s) 207, 734, 945, 1061
HpyF3I CTNAG 5 cut(s) 90, 182, 266, 311, 1123
HpySE526I ACGT 1 cut(s) 606
Hsp92I GRCGYC 1 cut(s) 606
Ksp22I TGATCA 1 cut(s) 241
Kzo9I GATC 5 cut(s) 10, 93, 241, 375, 829
LguI GCTCTTC 1 cut(s) 892
LpnPI CCDG 9 cut(s) 214, 264, 416, 530, 793, 852, 953, 1021, 1048
Lsp1109I GCAGC 3 cut(s) 606, 935, 1039
LweI GCATC 2 cut(s) 266, 456
MaeI CTAG 4 cut(s) 65, 347, 702, 782
MaeII ACGT 1 cut(s) 606
MaeIII GTNAC 4 cut(s) 607, 721, 1156, 1199
MalI GATC 5 cut(s) 12, 95, 243, 377, 831
MboI GATC 5 cut(s) 10, 93, 241, 375, 829
MboII GAAGA 8 cut(s) 254, 338, 350, 788, 909, 1175, 1178, 1325
MfeI CAATTG 1 cut(s) 35
MflI RGATCY 2 cut(s) 10, 829
MhlI GDGCHC 1 cut(s) 1347
MlyI GAGTC 3 cut(s) 380, 1001, 1062
MmeI TCCRAC 1 cut(s) 1002
MroXI GAANNNNTTC 1 cut(s) 801
MseI TTAA 5 cut(s) 18, 287, 389, 425, 1275
MslI CAYNNNNRTG 1 cut(s) 728
MspA1I CMGCKG 1 cut(s) 1127
MspR9I CCNGG 1 cut(s) 1036
MunI CAATTG 1 cut(s) 35
MvaI CCWGG 1 cut(s) 1036
MvnI CGCG 1 cut(s) 321
MwoI GCNNNNNNNGC 4 cut(s) 207, 734, 945, 1061
NcoI CCATGG 1 cut(s) 1290
NdeII GATC 5 cut(s) 10, 93, 241, 375, 829
NlaIV GGNNCC 1 cut(s) 12
NmuCI GTSAC 4 cut(s) 607, 721, 1156, 1199
NspI RCATGY 3 cut(s) 717, 1118, 1287
NspV TTCGAA 2 cut(s) 404, 681
PagI TCATGA 1 cut(s) 1333
PasI CCCWGGG 1 cut(s) 1035
PciI ACATGT 1 cut(s) 1114
PciSI GCTCTTC 1 cut(s) 892
PcsI WCGNNNNNNNCGW 1 cut(s) 492
PdmI GAANNNNTTC 1 cut(s) 801
PfeI GAWTC 3 cut(s) 497, 928, 1223
PflMI CCANNNNNTGG 1 cut(s) 1021
PkrI GCNGC 3 cut(s) 621, 950, 1054
PleI GAGTC 3 cut(s) 379, 1001, 1062
PpsI GAGTC 3 cut(s) 379, 1001, 1062
PscI ACATGT 1 cut(s) 1114
PsiI TTATAA 2 cut(s) 861, 1358
Psp6I CCWGG 1 cut(s) 1034
PspGI CCWGG 1 cut(s) 1034
PspN4I GGNNCC 1 cut(s) 12
PspPI GGNCC 1 cut(s) 1087
PstI CTGCAG 1 cut(s) 1057
PsuI RGATCY 2 cut(s) 10, 829
PvuII CAGCTG 1 cut(s) 1127
RsaI GTAC 2 cut(s) 296, 677
RsaNI GTAC 2 cut(s) 295, 676
RseI CAYNNNNRTG 1 cut(s) 728
SapI GCTCTTC 1 cut(s) 892
SaqAI TTAA 5 cut(s) 18, 287, 389, 425, 1275
SatI GCNGC 3 cut(s) 620, 949, 1053
Sau3AI GATC 5 cut(s) 10, 93, 241, 375, 829
Sau96I GGNCC 1 cut(s) 1087
SchI GAGTC 3 cut(s) 380, 1001, 1062
ScrFI CCNGG 1 cut(s) 1036
SduI GDGCHC 1 cut(s) 1347
SfaNI GCATC 2 cut(s) 266, 456
SfcI CTRYAG 1 cut(s) 1053
SfuI TTCGAA 2 cut(s) 404, 681
SinI GGWCC 1 cut(s) 1087
SmiMI CAYNNNNRTG 1 cut(s) 728
SmlI CTYRAG 2 cut(s) 368, 1346
SmoI CTYRAG 2 cut(s) 368, 1346
SsiI CCGC 2 cut(s) 321, 1085
SspI AATATT 1 cut(s) 692
SspMI CTAG 4 cut(s) 65, 347, 702, 782
StyD4I CCNGG 1 cut(s) 1034
StyI CCWWGG 2 cut(s) 64, 1290
TaaI ACNGT 3 cut(s) 386, 1180, 1342
TaiI ACGT 1 cut(s) 609
TaqI TCGA 7 cut(s) 96, 374, 404, 681, 774, 926, 1066
TatI WGTACW 1 cut(s) 675
TfiI GAWTC 3 cut(s) 497, 928, 1223
Tru1I TTAA 5 cut(s) 18, 287, 389, 425, 1275
Tru9I TTAA 5 cut(s) 18, 287, 389, 425, 1275
TscAI CASTG 3 cut(s) 678, 730, 1139
TseFI GTSAC 4 cut(s) 607, 721, 1156, 1199
TseI GCWGC 3 cut(s) 619, 948, 1052
Tsp45I GTSAC 4 cut(s) 607, 721, 1156, 1199
TspDTI ATGAA 8 cut(s) 195, 646, 863, 1157, 1161, 1219, 1290, 1326
TspRI CASTG 3 cut(s) 678, 730, 1139
Van91I CCANNNNNTGG 1 cut(s) 1021
VpaK11BI GGWCC 1 cut(s) 1087
XapI RAATTY 6 cut(s) 102, 114, 224, 248, 648, 1269
XceI RCATGY 3 cut(s) 717, 1118, 1287
XmaJI CCTAGG 1 cut(s) 64
XmiI GTMKAC 1 cut(s) 1189
XmnI GAANNNNTTC 1 cut(s) 801
XspI CTAG 4 cut(s) 65, 347, 702, 782
ZraI GACGTC 1 cut(s) 607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.