Rmu_sc0000028.1_g000016

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000028.1
OG0000053
Physical Location & Seq
Reverse (-)
87482 .. 89526
2045 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000028.1_g000016.1.cds

Sequence Viewer

Length: 1047 bp
atgagttctctgtctttacaaagattacacttgattgattacattcagcgcttggggttgtcctaccattttgaggatgagatttaccaacttttacatcaaatttacaaccggtcctgttcttcttatgatgatgatgatgacgacgacgacgacgacgacgacgaccttcacacagttgctctccgatttcggctgcttaggcaacaaggttttaaggtttcatgcaacatgttcaacaagttcatcgatgttgatgggaaatttaaggaatcatgcgttgctgatgtagtaggattgctaagtttgtacgaagcaacacatctaaggacacatggagatgatatattagatcgagcacggtccttcaccaccactcatcttgagtttgcagtggcagaacacggccgtttaagccccccgctttcaaaacaagtagctcatgccttatatcaaccactctggaagggaaacccaaggattgaagcgaggcattacctctctagctaccgggaactaaatacttcacattttagcgaaagtcttttgacttttgcgaagttggatttcaatcaattgcagcgaatccatcaaaaagaactaagtcacatcacaaggtggtggaaggagttggactttgtcaacaaactaccttttgcaagggacagaatagtagagtgttacttttggtctttgggagtctactttgagcccgagtatcattttgggaggacaacattatgcaaagttcttggcttactaaccatgattgatgacacttacgatacgtacggcacacctgaagaactagagctctttactgaagctattgagaggtgggatatctctgccatggattcattgcctgactatatgaaagtttgctatgaggcattgttgaatgtctacactgaaattaaagatgagcttgcaaaggagggaaactcgtatcgcatcaactatgcaatagaagcagtaagcctcataaggtctcagcgagagctgactgatttagtgttttatggtttatgggagccatgtgggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

348

Amino Acids

40.89

Weight (kDa)

4.98

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 702, 906
AciI CCGC 1 cut(s) 422
AcoI YGGCCR 1 cut(s) 406
AcsI RAATTY 2 cut(s) 102, 263
AcuI CTGAAG 2 cut(s) 822, 843
AdeI CACNNNGTG 1 cut(s) 618
AfaI GTAC 2 cut(s) 311, 791
AfeI AGCGCT 1 cut(s) 50
AfiI CCNNNNNNNGG 1 cut(s) 73
AflIII ACRYGT 1 cut(s) 231
AgeI ACCGGT 1 cut(s) 111
AgsI TTSAA 5 cut(s) 238, 429, 485, 571, 901
AluBI AGCT 6 cut(s) 440, 507, 814, 827, 928, 1003
AluI AGCT 6 cut(s) 440, 507, 814, 827, 928, 1003
Alw21I GWGCWC 2 cut(s) 361, 816
Alw26I GTCTC 1 cut(s) 996
Ama87I CYCGRG 1 cut(s) 713
Aor51HI AGCGCT 1 cut(s) 50
AoxI GGCC 1 cut(s) 406
ApeKI GCWGC 2 cut(s) 196, 580
ApoI RAATTY 2 cut(s) 102, 263
AsiGI ACCGGT 1 cut(s) 111
AspLEI GCGC 1 cut(s) 51
AspS9I GGNCC 2 cut(s) 114, 363
AsuC2I CCSGG 1 cut(s) 512
AsuHPI GGTGA 1 cut(s) 361
AvaI CYCGRG 1 cut(s) 713
AvaII GGWCC 2 cut(s) 114, 363
BanII GRGCYC 2 cut(s) 714, 816
Bbv12I GWGCWC 2 cut(s) 361, 816
BbvI GCAGC 2 cut(s) 183, 592
BccI CCATC 2 cut(s) 251, 597
BceAI ACGGC 3 cut(s) 393, 421, 808
BcnI CCSGG 1 cut(s) 512
BcoDI GTCTC 1 cut(s) 996
BfaI CTAG 2 cut(s) 504, 809
BfoI RGCGCY 1 cut(s) 52
BisI GCNGC 2 cut(s) 197, 581
BlsI GCNGC 2 cut(s) 198, 582
Bme1390I CCNGG 1 cut(s) 512
Bme18I GGWCC 2 cut(s) 114, 363
BmeT110I CYCGRG 1 cut(s) 713
BmgT120I GGNCC 2 cut(s) 114, 363
BmiI GGNNCC 1 cut(s) 1035
BmrFI CCNGG 1 cut(s) 512
BmsI GCATC 1 cut(s) 963
BplI GAGNNNNNCTC 2 cut(s) 929, 961
Bpu10I CCTNAGC 1 cut(s) 200
BpuEI CTTGAG 1 cut(s) 404
BpuMI CCSGG 1 cut(s) 512
Bsa29I ATCGAT 1 cut(s) 249
BsaAI YACGTR 1 cut(s) 789
BsaBI GATNNNNATC 1 cut(s) 570
BsaI GGTCTC 1 cut(s) 996
BsaJI CCNNGG 2 cut(s) 476, 852
BsaWI WCCGGW 1 cut(s) 111
Bsc4I CCNNNNNNNGG 1 cut(s) 73
Bse118I RCCGGY 1 cut(s) 111
Bse3DI GCAATG 1 cut(s) 860
Bse8I GATNNNNATC 1 cut(s) 570
BseCI ATCGAT 1 cut(s) 249
BseDI CCNNGG 2 cut(s) 476, 852
BseGI GGATG 1 cut(s) 82
BseJI GATNNNNATC 1 cut(s) 570
BseLI CCNNNNNNNGG 1 cut(s) 73
BseMI GCAATG 1 cut(s) 860
BseMII CTCAG 1 cut(s) 1007
BseX3I CGGCCG 1 cut(s) 406
BseXI GCAGC 2 cut(s) 183, 592
Bsh1285I CGRYCG 1 cut(s) 409
BshFI GGCC 1 cut(s) 408
BshTI ACCGGT 1 cut(s) 111
BshVI ATCGAT 1 cut(s) 249
BsiEI CGRYCG 1 cut(s) 409
BsiHKAI GWGCWC 2 cut(s) 361, 816
BsiHKCI CYCGRG 1 cut(s) 713
BsiSI CCGG 2 cut(s) 112, 511
BsiWI CGTACG 1 cut(s) 789
BslFI GGGAC 1 cut(s) 677
BslI CCNNNNNNNGG 1 cut(s) 73
BsmAI GTCTC 1 cut(s) 996
BsmFI GGGAC 1 cut(s) 677
BsnI GGCC 1 cut(s) 408
Bso31I GGTCTC 1 cut(s) 996
BsoBI CYCGRG 1 cut(s) 713
Bsp1286I GDGCHC 3 cut(s) 361, 714, 816
Bsp143I GATC 1 cut(s) 352
Bsp19I CCATGG 1 cut(s) 852
BspACI CCGC 1 cut(s) 422
BspANI GGCC 1 cut(s) 408
BspCNI CTCAG 1 cut(s) 1006
BspDI ATCGAT 1 cut(s) 249
BspLI GGNNCC 1 cut(s) 1035
BspTNI GGTCTC 1 cut(s) 996
BsrDI GCAATG 1 cut(s) 860
BsrFI RCCGGY 1 cut(s) 111
BssAI RCCGGY 1 cut(s) 111
BssECI CCNNGG 2 cut(s) 476, 852
BssMI GATC 1 cut(s) 352
BssT1I CCWWGG 2 cut(s) 476, 852
Bst4CI ACNGT 2 cut(s) 178, 363
BstBAI YACGTR 1 cut(s) 789
BstC8I GCNNGC 1 cut(s) 930
BstDEI CTNAG 5 cut(s) 200, 302, 326, 602, 993
BstDSI CCRYGG 1 cut(s) 852
BstF5I GGATG 1 cut(s) 82
BstH2I RGCGCY 1 cut(s) 52
BstHHI GCGC 1 cut(s) 51
BstKTI GATC 1 cut(s) 355
BstMAI GTCTC 1 cut(s) 996
BstMBI GATC 1 cut(s) 352
BstMCI CGRYCG 1 cut(s) 409
BstMWI GCNNNNNNNGC 3 cut(s) 202, 414, 971
BstNSI RCATGY 1 cut(s) 235
BstSCI CCNGG 1 cut(s) 510
BstSNI TACGTA 1 cut(s) 789
BstV1I GCAGC 2 cut(s) 183, 592
BstZI CGGCCG 1 cut(s) 406
Bsu15I ATCGAT 1 cut(s) 249
BsuRI GGCC 1 cut(s) 408
BsuTUI ATCGAT 1 cut(s) 249
BtgI CCRYGG 1 cut(s) 852
BtsCI GGATG 1 cut(s) 82
BtsI GCAGTG 1 cut(s) 399
BtsIMutI CAGTG 2 cut(s) 399, 909
Cac8I GCNNGC 1 cut(s) 930
CfoI GCGC 1 cut(s) 51
Cfr10I RCCGGY 1 cut(s) 111
Cfr13I GGNCC 2 cut(s) 114, 363
ClaI ATCGAT 1 cut(s) 249
Csp6I GTAC 2 cut(s) 310, 790
CspAI ACCGGT 1 cut(s) 111
CspCI CAANNNNNGTGG 2 cut(s) 364, 399
CviAII CATG 8 cut(s) 225, 232, 276, 335, 443, 766, 853, 1038
CviQI GTAC 2 cut(s) 310, 790
DdeI CTNAG 5 cut(s) 200, 302, 326, 602, 993
DpnI GATC 1 cut(s) 354
DpnII GATC 1 cut(s) 352
DraIII CACNNNGTG 1 cut(s) 618
EaeI YGGCCR 1 cut(s) 406
EagI CGGCCG 1 cut(s) 406
Ecl136II GAGCTC 1 cut(s) 814
EclXI CGGCCG 1 cut(s) 406
Eco105I TACGTA 1 cut(s) 789
Eco130I CCWWGG 2 cut(s) 476, 852
Eco24I GRGCYC 2 cut(s) 714, 816
Eco31I GGTCTC 1 cut(s) 996
Eco32I GATATC 1 cut(s) 844
Eco47I GGWCC 2 cut(s) 114, 363
Eco47III AGCGCT 1 cut(s) 50
Eco52I CGGCCG 1 cut(s) 406
Eco53kI GAGCTC 1 cut(s) 814
Eco57I CTGAAG 2 cut(s) 822, 843
Eco88I CYCGRG 1 cut(s) 713
EcoICRI GAGCTC 1 cut(s) 814
EcoRV GATATC 1 cut(s) 844
EcoT14I CCWWGG 2 cut(s) 476, 852
EcoT38I GRGCYC 2 cut(s) 714, 816
ErhI CCWWGG 2 cut(s) 476, 852
FaeI CATG 8 cut(s) 228, 235, 279, 338, 446, 769, 856, 1041
FalI AAGNNNNNCTT 2 cut(s) 912, 944
FaqI GGGAC 1 cut(s) 677
FatI CATG 8 cut(s) 224, 231, 275, 334, 442, 765, 852, 1037
FauI CCCGC 1 cut(s) 429
FblI GTMKAC 2 cut(s) 702, 906
Fnu4HI GCNGC 2 cut(s) 197, 581
FokI GGATG 1 cut(s) 89
FriOI GRGCYC 2 cut(s) 714, 816
Fsp4HI GCNGC 2 cut(s) 197, 581
FspBI CTAG 2 cut(s) 504, 809
GlaI GCGC 1 cut(s) 50
GluI GCNGC 2 cut(s) 197, 581
HaeII RGCGCY 1 cut(s) 52
HaeIII GGCC 1 cut(s) 408
HapII CCGG 2 cut(s) 112, 511
HhaI GCGC 1 cut(s) 51
Hin1II CATG 8 cut(s) 228, 235, 279, 338, 446, 769, 856, 1041
Hin6I GCGC 1 cut(s) 49
HinP1I GCGC 1 cut(s) 49
HincII GTYRAC 1 cut(s) 643
HindII GTYRAC 1 cut(s) 643
HinfI GANTC 4 cut(s) 272, 585, 699, 857
HpaII CCGG 2 cut(s) 112, 511
HphI GGTGA 1 cut(s) 361
Hpy166II GTNNAC 3 cut(s) 643, 703, 907
Hpy188I TCNGA 1 cut(s) 188
Hpy188III TCNNGA 2 cut(s) 383, 463
Hpy8I GTNNAC 3 cut(s) 643, 703, 907
Hpy99I CGWCG 7 cut(s) 149, 152, 155, 158, 161, 164, 167
HpyAV CCTTC 4 cut(s) 179, 376, 460, 619
HpyCH4III ACNGT 2 cut(s) 178, 363
HpyCH4IV ACGT 1 cut(s) 788
HpyCH4V TGCA 7 cut(s) 228, 392, 580, 659, 744, 932, 965
HpyF10VI GCNNNNNNNGC 3 cut(s) 202, 414, 971
HpyF3I CTNAG 5 cut(s) 200, 302, 326, 602, 993
HpySE526I ACGT 1 cut(s) 788
Hsp92II CATG 8 cut(s) 228, 235, 279, 338, 446, 769, 856, 1041
HspAI GCGC 1 cut(s) 49
Kzo9I GATC 1 cut(s) 352
LmnI GCTCC 1 cut(s) 1033
LpnPI CCDG 6 cut(s) 125, 130, 448, 524, 813, 879
Lsp1109I GCAGC 2 cut(s) 183, 592
LweI GCATC 1 cut(s) 963
MaeI CTAG 2 cut(s) 504, 809
MaeII ACGT 1 cut(s) 788
MaeIII GTNAC 2 cut(s) 605, 680
MalI GATC 1 cut(s) 354
MboI GATC 1 cut(s) 352
MboII GAAGA 2 cut(s) 114, 815
MfeI CAATTG 1 cut(s) 575
MhlI GDGCHC 3 cut(s) 361, 714, 816
MluCI AATT 4 cut(s) 102, 263, 575, 915
MlyI GAGTC 1 cut(s) 708
MmeI TCCRAC 2 cut(s) 543, 612
MnlI CCTC 8 cut(s) 67, 483, 509, 723, 828, 883, 931, 992
MseI TTAA 4 cut(s) 216, 267, 413, 918
MslI CAYNNNNRTG 1 cut(s) 339
MspI CCGG 2 cut(s) 112, 511
MspR9I CCNGG 1 cut(s) 512
MunI CAATTG 1 cut(s) 575
MwoI GCNNNNNNNGC 3 cut(s) 202, 414, 971
NciI CCSGG 1 cut(s) 512
NcoI CCATGG 1 cut(s) 852
NdeII GATC 1 cut(s) 352
NlaIII CATG 8 cut(s) 228, 235, 279, 338, 446, 769, 856, 1041
NlaIV GGNNCC 1 cut(s) 1035
NmuCI GTSAC 1 cut(s) 605
NspI RCATGY 1 cut(s) 235
PciI ACATGT 1 cut(s) 231
PcsI WCGNNNNNNNCGW 5 cut(s) 150, 153, 156, 159, 162
PfeI GAWTC 3 cut(s) 272, 585, 857
Pfl23II CGTACG 1 cut(s) 789
PflFI GACNNNGTC 1 cut(s) 638
PinAI ACCGGT 1 cut(s) 111
PkrI GCNGC 2 cut(s) 198, 582
PleI GAGTC 1 cut(s) 707
PpsI GAGTC 1 cut(s) 707
Ppu21I YACGTR 1 cut(s) 789
PscI ACATGT 1 cut(s) 231
Psp124BI GAGCTC 1 cut(s) 816
PspLI CGTACG 1 cut(s) 789
PspN4I GGNNCC 1 cut(s) 1035
PspPI GGNCC 2 cut(s) 114, 363
PsyI GACNNNGTC 1 cut(s) 638
RsaI GTAC 2 cut(s) 311, 791
RsaNI GTAC 2 cut(s) 310, 790
RseI CAYNNNNRTG 1 cut(s) 339
SacI GAGCTC 1 cut(s) 816
SaqAI TTAA 4 cut(s) 216, 267, 413, 918
SatI GCNGC 2 cut(s) 197, 581
Sau3AI GATC 1 cut(s) 352
Sau96I GGNCC 2 cut(s) 114, 363
SchI GAGTC 1 cut(s) 708
ScrFI CCNGG 1 cut(s) 512
SduI GDGCHC 3 cut(s) 361, 714, 816
SfaNI GCATC 1 cut(s) 963
SinI GGWCC 2 cut(s) 114, 363
SmiMI CAYNNNNRTG 1 cut(s) 339
SmlI CTYRAG 1 cut(s) 383
SmoI CTYRAG 1 cut(s) 383
SnaBI TACGTA 1 cut(s) 789
Sse9I AATT 4 cut(s) 102, 263, 575, 915
SsiI CCGC 1 cut(s) 422
SspMI CTAG 2 cut(s) 504, 809
SstI GAGCTC 1 cut(s) 816
StyD4I CCNGG 1 cut(s) 510
StyI CCWWGG 2 cut(s) 476, 852
TaaI ACNGT 2 cut(s) 178, 363
TaiI ACGT 1 cut(s) 791
TaqI TCGA 2 cut(s) 249, 355
TasI AATT 4 cut(s) 102, 263, 575, 915
TfiI GAWTC 3 cut(s) 272, 585, 857
Tru1I TTAA 4 cut(s) 216, 267, 413, 918
Tru9I TTAA 4 cut(s) 216, 267, 413, 918
TscAI CASTG 2 cut(s) 399, 916
TseFI GTSAC 1 cut(s) 605
TseI GCWGC 2 cut(s) 196, 580
Tsp45I GTSAC 1 cut(s) 605
TspDTI ATGAA 4 cut(s) 213, 235, 849, 890
TspRI CASTG 2 cut(s) 399, 916
Tth111I GACNNNGTC 1 cut(s) 638
VpaK11BI GGWCC 2 cut(s) 114, 363
XapI RAATTY 2 cut(s) 102, 263
XceI RCATGY 1 cut(s) 235
XmiI GTMKAC 2 cut(s) 702, 906
XspI CTAG 2 cut(s) 504, 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.