Prupe.4G190700_v2.0.a1

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Forward (+)
11377002 .. 11380266
3265 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G190700.1

Sequence Viewer

Length: 1653 bp
ATGTCTGTTCAAGTTTCACTTGCATCGGCTCAACCTCAAACCCCTAAGGCCACTCCTGATGATGTTAATCGACGTTGTGCTAATTTTTCTCCGAGCATGTGGGGCTATCATTTTCTGTCATATGCTTCTGTGGAAACAAACATCAAAGCTAAGCAACGTGCCCAAGAACTGAAGGAAAAAGTGAAGATGATCATAATGACTCCAGTTAAAAAGCCTTCACAAAAATTGGACTTGATTCATGACATCCAGCGCTTAGGTGTCTCTCACCATTTTGAAAATGAGATTGAGGAACTTCTGCAGCAAATTCACACCAGTTCCCATTGCAGTACTGAGTCTGGGGACCAAGAAACTGATAATGAGCTTTACACTGCAGCGCTCCGATTTCGATTACTCAGACAACAAGGTTATAATATTTCATGCGATATATTCAATAATTTCAAGGACAGTGATGGGAAATTTAAGGAATCTCTGGTGAATGATGTAGCCTTAACCTTCACCACCACTCATCTTGAATCCGCAACGCACCGTTTAAGCCCCATACTTTCGAAACAAGTCACTCATGCCATGTACCAGCCATTCTGGAAGGGCTTGCCAAGGCTAGAAACAAGGCATTACCTGTCTCTCTATCAGGAACGCGATTCACAGAACGAGACTCTCCTGAATTTCGCAAAGCTGGATTTCAATCTACTGCAACAAGTTCATCAAAGAGAACTAAGTGAAATTTCAAGGTGGTGGAAGGACTTAGACTTTGTAAACAAGCTACCTTTTGCAAGAGACAGAGTAGTTGAGAGCTACTTTTGGGCATCGGGAGTACACTTTGAGCCTCAATATTACTTTGCTAGGATAACACTATGCAAAGTTATTGCTTTGATAACCATCCTTAATGACATCTATGATGTGTACGGCACACATGAGGAACTAGAGCTCTTTACTGAAGCTGTTGAAAGGTGGGACATCTCTGCTATGGATCATCTGCCAGAGTACATGAAAGTTTGCTATCAAGCACTATTGGATGTTTACGTTGAAATTGAAGAAAATCTTGCAAATGAGGGAAACTTATATAGCATCCACTACGCAAGAGAAGCAAGATTAATTACATGGTTTGGTCTTTCAGATAAAGTCCTAGTTAGAGCTTACTTCCGAAAAGCCAAATGGTTCCATCAGAAATACACACCAACAATGGATGACTACATGTCGGCAGCGCTTAATGCATCCAACTTCACGTTGGCAACCACATCCTTTGTTGGAATGGGAGATATTGCTACCAAATACTCCATGGATTGGGTGTTCGACGACCCTAAGATGGTAAAGGCTGCATCATTAATTGGTAGAATCATGAATGACATGAAATCCCGCCAGTTTGAGCAAAAGAGAGGACATGTTGCCTCAGCTGTGGAATGCTACATGAAAGAATATGGTGCCACAGAAGAAGAAGCAAATATCGAACTAAGCAAGCAAGTGAATAATGCATGGAAGGACATAAACGAAACGTGCATCCAGAACACCACCATCCCCATGCCCCTGTTACTGCGAATTTTGAATCTTGCACGTGTGGTTGAAGTTTTATACAAGCATGGTGATGGCTTTACTCATGCTGGAATTTTTCTCAAGGATTCTGAAGTTTCTCTGTTTGTAGAACCTGTGCCCCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

551

Amino Acids

63.71

Weight (kDa)

5.84

Isoelectric Point (pI)

46.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 408
AccB1I GGYRCC 1 cut(s) 1418
AccB7I CCANNNNNTGG 1 cut(s) 1281
AccII CGCG 1 cut(s) 636
AciI CCGC 2 cut(s) 516, 1354
AclWI GGATC 1 cut(s) 975
AcsI RAATTY 6 cut(s) 303, 455, 661, 720, 1533, 1599
AcuI CTGAAG 3 cut(s) 191, 954, 1638
AcvI CACGTG 1 cut(s) 1550
AfaI GTAC 5 cut(s) 328, 569, 813, 902, 983
AfeI AGCGCT 3 cut(s) 251, 375, 1203
AfiI CCNNNNNNNGG 2 cut(s) 1281, 1303
AflIII ACRYGT 3 cut(s) 1191, 1378, 1549
AhdI GACNNNNNGTC 1 cut(s) 1192
AloI GAACNNNNNNTCC 2 cut(s) 1271, 1303
AluBI AGCT 9 cut(s) 149, 361, 673, 760, 792, 925, 938, 1133, 1391
AluI AGCT 9 cut(s) 149, 361, 673, 760, 792, 925, 938, 1133, 1391
Alw21I GWGCWC 1 cut(s) 927
Alw26I GTCTC 4 cut(s) 265, 624, 644, 768
AlwI GGATC 1 cut(s) 975
Aor51HI AGCGCT 3 cut(s) 251, 375, 1203
AoxI GGCC 1 cut(s) 48
ApeKI GCWGC 4 cut(s) 298, 371, 1199, 1313
ApoI RAATTY 6 cut(s) 303, 455, 661, 720, 1533, 1599
ArsI GACNNNNNNTTYG 2 cut(s) 731, 763
AseI ATTAAT 2 cut(s) 1091, 1322
AspLEI GCGC 3 cut(s) 252, 376, 1204
AspS9I GGNCC 1 cut(s) 340
AsuHPI GGTGA 4 cut(s) 257, 484, 487, 1589
AsuII TTCGAA 1 cut(s) 545
AvaII GGWCC 1 cut(s) 340
AxyI CCTNAGG 1 cut(s) 45
BaeGI GKGCMC 2 cut(s) 163, 1647
BanI GGYRCC 1 cut(s) 1418
BanII GRGCYC 1 cut(s) 927
BbrPI CACGTG 1 cut(s) 1550
Bbv12I GWGCWC 1 cut(s) 927
BbvCI CCTCAGC 1 cut(s) 1387
BbvI GCAGC 4 cut(s) 310, 383, 1211, 1300
BccI CCATC 6 cut(s) 443, 884, 1167, 1297, 1517, 1574
BceAI ACGGC 1 cut(s) 919
BclI TGATCA 1 cut(s) 189
BcoDI GTCTC 4 cut(s) 265, 624, 644, 768
BfaI CTAG 4 cut(s) 599, 840, 920, 1124
BfmI CTRYAG 3 cut(s) 296, 369, 1649
BfoI RGCGCY 3 cut(s) 253, 377, 1205
BisI GCNGC 4 cut(s) 299, 372, 1200, 1314
BlpI GCTNAGC 1 cut(s) 150
BlsI GCNGC 4 cut(s) 300, 373, 1201, 1315
BmcAI AGTACT 1 cut(s) 328
Bme18I GGWCC 1 cut(s) 340
BmeRI GACNNNNNGTC 1 cut(s) 1192
BmgT120I GGNCC 1 cut(s) 340
BmiI GGNNCC 3 cut(s) 341, 1157, 1420
BmsI GCATC 6 cut(s) 32, 812, 1074, 1220, 1325, 1503
BpmI CTGGAG 1 cut(s) 186
Bpu10I CCTNAGC 2 cut(s) 253, 1387
Bpu1102I GCTNAGC 1 cut(s) 150
Bpu14I TTCGAA 1 cut(s) 545
BpuEI CTTGAG 1 cut(s) 1592
BsaAI YACGTR 1 cut(s) 1550
BsaBI GATNNNNATC 3 cut(s) 66, 681, 875
BsaJI CCNNGG 2 cut(s) 593, 1275
Bsc4I CCNNNNNNNGG 2 cut(s) 1281, 1303
Bse1I ACTGG 3 cut(s) 203, 312, 1357
Bse21I CCTNAGG 1 cut(s) 45
Bse3DI GCAATG 1 cut(s) 319
Bse8I GATNNNNATC 3 cut(s) 66, 681, 875
BseDI CCNNGG 2 cut(s) 593, 1275
BseGI GGATG 9 cut(s) 243, 876, 1018, 1065, 1189, 1211, 1235, 1494, 1509
BseJI GATNNNNATC 3 cut(s) 66, 681, 875
BseLI CCNNNNNNNGG 2 cut(s) 1281, 1303
BseMI GCAATG 1 cut(s) 319
BseMII CTCAG 3 cut(s) 321, 406, 1401
BseNI ACTGG 3 cut(s) 203, 312, 1357
BseSI GKGCMC 2 cut(s) 163, 1647
BseXI GCAGC 4 cut(s) 310, 383, 1211, 1300
Bsh1236I CGCG 1 cut(s) 636
BshFI GGCC 1 cut(s) 50
BshNI GGYRCC 1 cut(s) 1418
BsiHKAI GWGCWC 1 cut(s) 927
BslFI GGGAC 2 cut(s) 353, 965
BslI CCNNNNNNNGG 2 cut(s) 1281, 1303
BsmAI GTCTC 4 cut(s) 265, 624, 644, 768
BsmFI GGGAC 2 cut(s) 353, 965
BsmI GAATGC 1 cut(s) 1403
BsnI GGCC 1 cut(s) 50
Bsp119I TTCGAA 1 cut(s) 545
Bsp1286I GDGCHC 3 cut(s) 163, 927, 1647
Bsp143I GATC 2 cut(s) 189, 967
Bsp1720I GCTNAGC 1 cut(s) 150
Bsp19I CCATGG 1 cut(s) 1275
BspACI CCGC 2 cut(s) 516, 1354
BspANI GGCC 1 cut(s) 50
BspCNI CTCAG 3 cut(s) 322, 405, 1400
BspFNI CGCG 1 cut(s) 636
BspHI TCATGA 2 cut(s) 238, 1335
BspLI GGNNCC 3 cut(s) 341, 1157, 1420
BspMAI CTGCAG 2 cut(s) 300, 373
BspPI GGATC 1 cut(s) 975
BspT104I TTCGAA 1 cut(s) 545
BspT107I GGYRCC 1 cut(s) 1418
BsrDI GCAATG 1 cut(s) 319
BsrI ACTGG 3 cut(s) 203, 312, 1357
BssECI CCNNGG 2 cut(s) 593, 1275
BssMI GATC 2 cut(s) 189, 967
BssT1I CCWWGG 2 cut(s) 593, 1275
Bst4CI ACNGT 2 cut(s) 446, 527
BstBAI YACGTR 1 cut(s) 1550
BstBI TTCGAA 1 cut(s) 545
BstC8I GCNNGC 2 cut(s) 590, 1454
BstDSI CCRYGG 1 cut(s) 1275
BstF5I GGATG 9 cut(s) 243, 876, 1018, 1065, 1189, 1211, 1235, 1494, 1509
BstFNI CGCG 1 cut(s) 636
BstH2I RGCGCY 3 cut(s) 253, 377, 1205
BstHHI GCGC 3 cut(s) 252, 376, 1204
BstKTI GATC 2 cut(s) 192, 970
BstMAI GTCTC 4 cut(s) 265, 624, 644, 768
BstMBI GATC 2 cut(s) 189, 967
BstMWI GCNNNNNNNGC 3 cut(s) 102, 1082, 1208
BstNSI RCATGY 3 cut(s) 100, 1195, 1382
BstSFI CTRYAG 3 cut(s) 296, 369, 1649
BstSLI GKGCMC 2 cut(s) 163, 1647
BstUI CGCG 1 cut(s) 636
BstV1I GCAGC 4 cut(s) 310, 383, 1211, 1300
Bsu36I CCTNAGG 1 cut(s) 45
BsuRI GGCC 1 cut(s) 50
BtgI CCRYGG 1 cut(s) 1275
BtsCI GGATG 9 cut(s) 243, 876, 1018, 1065, 1189, 1211, 1235, 1494, 1509
BtsI GCAGTG 1 cut(s) 366
BtsIMutI CAGTG 2 cut(s) 366, 451
Cac8I GCNNGC 2 cut(s) 590, 1454
CciI TCATGA 2 cut(s) 238, 1335
CfoI GCGC 3 cut(s) 252, 376, 1204
Cfr13I GGNCC 1 cut(s) 340
Csp6I GTAC 5 cut(s) 327, 568, 812, 901, 982
CspCI CAANNNNNGTGG 4 cut(s) 490, 525, 1222, 1257
CviQI GTAC 5 cut(s) 327, 568, 812, 901, 982
DpnI GATC 2 cut(s) 191, 969
DpnII GATC 2 cut(s) 189, 967
DriI GACNNNNNGTC 1 cut(s) 1192
Eam1105I GACNNNNNGTC 1 cut(s) 1192
Ecl136II GAGCTC 1 cut(s) 925
Eco130I CCWWGG 2 cut(s) 593, 1275
Eco24I GRGCYC 1 cut(s) 927
Eco47I GGWCC 1 cut(s) 340
Eco47III AGCGCT 3 cut(s) 251, 375, 1203
Eco53kI GAGCTC 1 cut(s) 925
Eco57I CTGAAG 3 cut(s) 191, 954, 1638
Eco72I CACGTG 1 cut(s) 1550
Eco81I CCTNAGG 1 cut(s) 45
EcoICRI GAGCTC 1 cut(s) 925
EcoT14I CCWWGG 2 cut(s) 593, 1275
EcoT22I ATGCAT 2 cut(s) 1213, 1471
EcoT38I GRGCYC 1 cut(s) 927
ErhI CCWWGG 2 cut(s) 593, 1275
FalI AAGNNNNNCTT 3 cut(s) 35, 1023, 1055
FaqI GGGAC 2 cut(s) 353, 965
FauI CCCGC 1 cut(s) 1361
FauNDI CATATG 1 cut(s) 121
FbaI TGATCA 1 cut(s) 189
Fnu4HI GCNGC 4 cut(s) 299, 372, 1200, 1314
FokI GGATG 9 cut(s) 230, 863, 1025, 1052, 1196, 1198, 1222, 1481, 1496
FriOI GRGCYC 1 cut(s) 927
Fsp4HI GCNGC 4 cut(s) 299, 372, 1200, 1314
FspBI CTAG 4 cut(s) 599, 840, 920, 1124
GlaI GCGC 3 cut(s) 251, 375, 1203
GluI GCNGC 4 cut(s) 299, 372, 1200, 1314
GsuI CTGGAG 1 cut(s) 186
HaeII RGCGCY 3 cut(s) 253, 377, 1205
HaeIII GGCC 1 cut(s) 50
HhaI GCGC 3 cut(s) 252, 376, 1204
Hin6I GCGC 3 cut(s) 250, 374, 1202
HinP1I GCGC 3 cut(s) 250, 374, 1202
HphI GGTGA 4 cut(s) 257, 484, 487, 1589
Hpy166II GTNNAC 4 cut(s) 754, 814, 901, 1018
Hpy188I TCNGA 7 cut(s) 93, 380, 395, 1114, 1142, 1164, 1618
Hpy188III TCNNGA 9 cut(s) 56, 239, 509, 580, 629, 658, 807, 1336, 1498
Hpy8I GTNNAC 4 cut(s) 754, 814, 901, 1018
Hpy99I CGWCG 2 cut(s) 75, 1295
HpyAV CCTTC 6 cut(s) 166, 225, 502, 577, 730, 1468
HpyCH4III ACNGT 2 cut(s) 446, 527
HpyCH4IV ACGT 6 cut(s) 73, 157, 1020, 1223, 1490, 1549
HpyF10VI GCNNNNNNNGC 3 cut(s) 102, 1082, 1208
HpySE526I ACGT 6 cut(s) 73, 157, 1020, 1223, 1490, 1549
HspAI GCGC 3 cut(s) 250, 374, 1202
Ksp22I TGATCA 1 cut(s) 189
Kzo9I GATC 2 cut(s) 189, 967
LmnI GCTCC 1 cut(s) 381
Lsp1109I GCAGC 4 cut(s) 310, 383, 1211, 1300
LweI GCATC 6 cut(s) 32, 812, 1074, 1220, 1325, 1503
MaeI CTAG 4 cut(s) 599, 840, 920, 1124
MaeII ACGT 6 cut(s) 73, 157, 1020, 1223, 1490, 1549
MaeIII GTNAC 2 cut(s) 553, 1524
MalI GATC 2 cut(s) 191, 969
MboI GATC 2 cut(s) 189, 967
MboII GAAGA 4 cut(s) 196, 1043, 1439, 1442
MhlI GDGCHC 3 cut(s) 163, 927, 1647
MlyI GAGTC 3 cut(s) 193, 341, 646
MmeI TCCRAC 2 cut(s) 1225, 1239
MnlI CCTC 7 cut(s) 45, 280, 834, 907, 1042, 1367, 1396
Mph1103I ATGCAT 2 cut(s) 1213, 1471
MseI TTAA 9 cut(s) 66, 207, 459, 488, 530, 882, 1091, 1206, 1322
MslI CAYNNNNRTG 2 cut(s) 1514, 1578
MspA1I CMGCKG 1 cut(s) 1391
Mva1269I GAATGC 1 cut(s) 1403
MvnI CGCG 1 cut(s) 636
MwoI GCNNNNNNNGC 3 cut(s) 102, 1082, 1208
NcoI CCATGG 1 cut(s) 1275
NdeI CATATG 1 cut(s) 121
NdeII GATC 2 cut(s) 189, 967
NlaIV GGNNCC 3 cut(s) 341, 1157, 1420
NmuCI GTSAC 1 cut(s) 553
NsiI ATGCAT 2 cut(s) 1213, 1471
NspI RCATGY 3 cut(s) 100, 1195, 1382
NspV TTCGAA 1 cut(s) 545
PagI TCATGA 2 cut(s) 238, 1335
PciI ACATGT 2 cut(s) 1191, 1378
PctI GAATGC 1 cut(s) 1403
PfeI GAWTC 7 cut(s) 235, 464, 512, 638, 1332, 1540, 1613
PflMI CCANNNNNTGG 1 cut(s) 1281
PkrI GCNGC 4 cut(s) 300, 373, 1201, 1315
PleI GAGTC 3 cut(s) 193, 340, 646
PmaCI CACGTG 1 cut(s) 1550
PmlI CACGTG 1 cut(s) 1550
PpsI GAGTC 3 cut(s) 193, 340, 646
Ppu21I YACGTR 1 cut(s) 1550
PscI ACATGT 2 cut(s) 1191, 1378
PshBI ATTAAT 2 cut(s) 1091, 1322
PsiI TTATAA 1 cut(s) 408
Psp124BI GAGCTC 1 cut(s) 927
PspCI CACGTG 1 cut(s) 1550
PspN4I GGNNCC 3 cut(s) 341, 1157, 1420
PspPI GGNCC 1 cut(s) 340
PstI CTGCAG 2 cut(s) 300, 373
PvuII CAGCTG 1 cut(s) 1391
RsaI GTAC 5 cut(s) 328, 569, 813, 902, 983
RsaNI GTAC 5 cut(s) 327, 568, 812, 901, 982
RseI CAYNNNNRTG 2 cut(s) 1514, 1578
SacI GAGCTC 1 cut(s) 927
SaqAI TTAA 9 cut(s) 66, 207, 459, 488, 530, 882, 1091, 1206, 1322
SatI GCNGC 4 cut(s) 299, 372, 1200, 1314
Sau3AI GATC 2 cut(s) 189, 967
Sau96I GGNCC 1 cut(s) 340
ScaI AGTACT 1 cut(s) 328
SchI GAGTC 3 cut(s) 193, 341, 646
SduI GDGCHC 3 cut(s) 163, 927, 1647
SfaNI GCATC 6 cut(s) 32, 812, 1074, 1220, 1325, 1503
SfcI CTRYAG 3 cut(s) 296, 369, 1649
SfuI TTCGAA 1 cut(s) 545
SinI GGWCC 1 cut(s) 340
SmiMI CAYNNNNRTG 2 cut(s) 1514, 1578
SmlI CTYRAG 1 cut(s) 1607
SmoI CTYRAG 1 cut(s) 1607
SsiI CCGC 2 cut(s) 516, 1354
SspI AATATT 2 cut(s) 412, 830
SspMI CTAG 4 cut(s) 599, 840, 920, 1124
SstI GAGCTC 1 cut(s) 927
StyI CCWWGG 2 cut(s) 593, 1275
TaaI ACNGT 2 cut(s) 446, 527
TaiI ACGT 6 cut(s) 76, 160, 1023, 1226, 1493, 1552
TaqI TCGA 5 cut(s) 70, 385, 545, 1290, 1443
TatI WGTACW 3 cut(s) 326, 811, 981
TfiI GAWTC 7 cut(s) 235, 464, 512, 638, 1332, 1540, 1613
Tru1I TTAA 9 cut(s) 66, 207, 459, 488, 530, 882, 1091, 1206, 1322
Tru9I TTAA 9 cut(s) 66, 207, 459, 488, 530, 882, 1091, 1206, 1322
TscAI CASTG 2 cut(s) 373, 451
TseFI GTSAC 1 cut(s) 553
TseI GCWGC 4 cut(s) 298, 371, 1199, 1313
Tsp45I GTSAC 1 cut(s) 553
TspDTI ATGAA 7 cut(s) 227, 405, 689, 1001, 1352, 1361, 1421
TspRI CASTG 2 cut(s) 373, 451
Van91I CCANNNNNTGG 1 cut(s) 1281
VpaK11BI GGWCC 1 cut(s) 340
VspI ATTAAT 2 cut(s) 1091, 1322
XapI RAATTY 6 cut(s) 303, 455, 661, 720, 1533, 1599
XceI RCATGY 3 cut(s) 100, 1195, 1382
XcmI CCANNNNNNNNNTGG 2 cut(s) 1222, 1273
XspI CTAG 4 cut(s) 599, 840, 920, 1124
ZrmI AGTACT 1 cut(s) 328
Zsp2I ATGCAT 2 cut(s) 1213, 1471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.