Rh1AG075700

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000053
Physical Location & Seq
Reverse (-)
12528415 .. 12539870
11456 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG075700.1

Sequence Viewer

Length: 2154 bp
ATGAAGCCCAGCGTCTTCCAATCTCCACAGCCTTCCTACCGCCGTACAACGAAGGCCGCCACGAACCGCTGCAGACTTCTCTACACCAACGTCGCCGCCAATCTTCGTCCCACTGCAGGAAAGACCCCATCATGCGCAGCCATTGATAGGCAAAGTAGACATGCAACAAACACAGGTAGATCCAATTGCAGCACGGTAGCTGCTGCTATCTTGGAACCAAACCCAGTACACCGCCGTCATTGCCTTGCCCCACACAGTGGGCACGAAACCAATCTGCCGCTGCATCGACACAAACAACCTGAAAAACCTCCATTGTCAAACCACAAGCCAAGAAACCAAAGGTCAATGGGCAATGATCCGTCCATTACTCGTTCAGCAGCATCACGCCGTCGGTTAGGTGACGTCGGATCACCACCGGACGAGAAGGGTTTTGCTGAAGCGTCTGACCTAGCTCAAACCCCGAATATTACTGCCACTCCTGATGTTACTCGATGTTCAGCTAATTTTTCCCCGGGCATTTGGGGTGATCATTTTCTGTCATATGCTTCCATGGAAGCGGCAGATAGTAAAAGTAAGAAACATGTCCAAGATTTGAAGGAAGAACTGAAGAGGATGATAATGGCTCCAACGAAAAGGCCTTCACAAAAGTTGCACTTCATCAACCACATTCAGCGCTTAGGTGTCTCATACCATTTCGAAGATGAGATTGACCAAATTTTGCAGCAAGTTCACCGAGAAGAAGAATATGATGATCTTTGCACCACTGCTCTAAGCTTTCGATTGCTTAGACAACATGGTTATAACGCTTCATGCAATATGTTTAACAAGTTCAAGGATGGTGATGGGAAATTTAAAGAATCGCTTGTTAATGATGTAGTCAGCCTGTTAAGCTTGTATGAAGCCTCGCATCTTCAGATGCCTGGGGAGGATTTACTAAACGAGGCACTAACCTTCTCCACCGGTCATCTCATGTCTGCAGCACACCATTTAAGCTCATCATCTCAGCTTTCAAAACAAGTAACTCATGCCTTGTATCAGCCCCTTTGGAAGGGCATTCCAAGGATTGAAGCGAGGCATCACTTGTCTATTTACCAAGAAGATGATGCGCATAATGAAACTCTCCTGAATTTTGCAAAGTTCGATTTTAACACCGTGCAGAAAGTCCATCAGAAAGAACTGAGCGAAATTACGAGGTGGTGGAAGGATTTCGACTTTGCAAACAAGCTACCTTTTGCAAGAGACAGGGTAGTTGAGGCCTATTTTTGGGCTTTGGCAGTCTACTTTGAGCCGGAATATTCCTTTGCCCGGATGGTGTCAGCCAAAGCTACTGCTATAATTACAGTCATTGACGACATATACGATGTGCAGGGCACGTATGAAGAATTAGAGAACTTTACTGAAGCTATTGAGAGGTGGGACATTTCTGCTGTTGATCAACTGCCAGAATATATGAAAGTGTGTTATAAAGCGCTGTTGAATTTCTTCACCGAGCTTGAAGAAAGTCTAACGAATAAGGGAATCTTATACCGCCTCCACTATGCGAGAGAAGGATTTAAAGTTCAAGTCAGAGCTTACTTCCAGGAAGCAAAATGGTTCAAACAAAAGTACATACCATCAATGGAAGAGTATATGTCTGTGGAACGCTATACATCCTTCTTCATGGTAGCAACAGTGTCATTTGTTGGAATGGGAGTTATTGTTACAAAAGACTCCATGGATTGGGTTTTCAGTGAACCTAAGATTTTAAAGGCCTCATCTATAATTGGCAGACTCATGAATGACCTTGTAGGCCATAAGTTTGAGCAAAAGAGAGAACACATTGCATCAGCCGTGGAATGCTACATGAAGCAATATGGCGTCACAGAAGAAGAAGCAGAAGTCGAGCTAACTAAACAAGTGAATGACGCATGGAAAGACATAAACGAAGAGTGGCTCGATGCCACCTCTATCCCTAGGCCCCTACTCTTGCGGATTTTGAACTTTGCACGTTCTAGTGAAGTTCTATACAAGGGTGAAGATGTGTACACACATTCTGAAAATGTGCTCAAGGGTTCTGTAGTTTCACCTTTATCGAACCCGTGCCCATATAAGCCTAAAATCTGGTCGTTTTCTCTTTTCTGCAAAATAAAGTCCTTCTTCGTTGTCGTAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

717

Amino Acids

82.16

Weight (kDa)

7.38

Isoelectric Point (pI)

49.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 173 - 344 3e-57 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 401 - 639 1.5e-97 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 441 - 639 4.1e-59 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 801, 1464
AatII GACGTC 1 cut(s) 405
Acc16I TGCGCA 2 cut(s) 136, 1107
AccB7I CCANNNNNTGG 2 cut(s) 257, 1719
AccI GTMKAC 2 cut(s) 157, 1278
AciI CCGC 9 cut(s) 40, 57, 67, 96, 232, 278, 557, 1528, 1969
AclWI GGATC 3 cut(s) 174, 350, 415
AcsI RAATTY 4 cut(s) 714, 848, 1126, 1477
AcuI CTGAAG 4 cut(s) 456, 626, 896, 1419
AcyI GRCGYC 2 cut(s) 402, 1857
AdeI CACNNNGTG 1 cut(s) 257
AfaI GTAC 4 cut(s) 46, 228, 1607, 2024
AfeI AGCGCT 2 cut(s) 674, 1470
AfiI CCNNNNNNNGG 7 cut(s) 116, 147, 257, 1048, 1263, 1305, 1719
AflIII ACRYGT 1 cut(s) 580
AgeI ACCGGT 1 cut(s) 959
AgsI TTSAA 9 cut(s) 595, 832, 1011, 1067, 1477, 1496, 1562, 1597, 1978
AjnI CCWGG 2 cut(s) 919, 1578
AloI GAACNNNNNNTCC 2 cut(s) 1542, 1574
Alw21I GWGCWC 1 cut(s) 2046
Alw26I GTCTC 2 cut(s) 688, 1233
AlwI GGATC 3 cut(s) 174, 350, 415
Ama87I CYCGRG 1 cut(s) 511
Aor51HI AGCGCT 2 cut(s) 674, 1470
AoxI GGCC 6 cut(s) 54, 635, 1254, 1749, 1789, 1955
ApeKI GCWGC 9 cut(s) 69, 137, 189, 200, 203, 280, 377, 721, 977
ApoI RAATTY 4 cut(s) 714, 848, 1126, 1477
AsiGI ACCGGT 1 cut(s) 959
Asp700I GAANNNNTTC 2 cut(s) 1205, 1481
AspA2I CCTAGG 1 cut(s) 1952
AspLEI GCGC 4 cut(s) 137, 675, 1108, 1471
AspS9I GGNCC 1 cut(s) 1956
AsuC2I CCSGG 3 cut(s) 512, 513, 1306
AsuHPI GGTGA 8 cut(s) 402, 410, 536, 722, 851, 1477, 2024, 2055
AsuII TTCGAA 1 cut(s) 696
AvaI CYCGRG 1 cut(s) 511
AvrII CCTAGG 1 cut(s) 1952
BaeGI GKGCMC 3 cut(s) 264, 1373, 2084
BbsI GAAGAC 1 cut(s) 7
Bbv12I GWGCWC 1 cut(s) 2046
BbvI GCAGC 9 cut(s) 56, 149, 187, 190, 201, 267, 389, 733, 989
BccI CCATC 6 cut(s) 136, 830, 836, 1173, 1303, 1621
BceAI ACGGC 4 cut(s) 27, 219, 372, 1814
BciT130I CCWGG 2 cut(s) 921, 1580
BclI TGATCA 2 cut(s) 526, 1432
BcnI CCSGG 3 cut(s) 512, 513, 1306
BcoDI GTCTC 2 cut(s) 688, 1233
BfaI CTAG 3 cut(s) 449, 1953, 1992
BfmI CTRYAG 4 cut(s) 70, 114, 975, 2055
BfoI RGCGCY 2 cut(s) 676, 1472
BlnI CCTAGG 1 cut(s) 1952
Bme1390I CCNGG 5 cut(s) 512, 513, 921, 1306, 1580
BmeT110I CYCGRG 1 cut(s) 511
BmgT120I GGNCC 1 cut(s) 1956
BmiI GGNNCC 3 cut(s) 216, 624, 1958
BmrFI CCNGG 5 cut(s) 512, 513, 921, 1306, 1580
BmrI ACTGGG 1 cut(s) 218
BmsI GCATC 8 cut(s) 292, 389, 906, 916, 1084, 1093, 1832, 1927
BmuI ACTGGG 1 cut(s) 218
BpiI GAAGAC 1 cut(s) 7
Bpu10I CCTNAGC 1 cut(s) 676
Bpu14I TTCGAA 1 cut(s) 696
BpuEI CTTGAG 1 cut(s) 2030
BpuMI CCSGG 3 cut(s) 512, 513, 1306
BsaAI YACGTR 1 cut(s) 1374
BsaHI GRCGYC 2 cut(s) 402, 1857
BsaJI CCNNGG 8 cut(s) 510, 511, 549, 920, 1058, 1713, 1830, 1952
BsaWI WCCGGW 2 cut(s) 415, 959
BsaXI ACNNNNNCTCC 4 cut(s) 460, 490, 1683, 1713
Bsc4I CCNNNNNNNGG 7 cut(s) 116, 147, 257, 1048, 1263, 1305, 1719
Bse118I RCCGGY 1 cut(s) 959
Bse1I ACTGG 1 cut(s) 224
Bse3DI GCAATG 3 cut(s) 238, 358, 1818
BseBI CCWGG 2 cut(s) 921, 1580
BseDI CCNNGG 8 cut(s) 510, 511, 549, 920, 1058, 1713, 1830, 1952
BseGI GGATG 4 cut(s) 618, 841, 1314, 1649
BseLI CCNNNNNNNGG 7 cut(s) 116, 147, 257, 1048, 1263, 1305, 1719
BseMI GCAATG 3 cut(s) 238, 358, 1818
BseMII CTCAG 2 cut(s) 1016, 1169
BseNI ACTGG 1 cut(s) 224
BseSI GKGCMC 3 cut(s) 264, 1373, 2084
BseXI GCAGC 9 cut(s) 56, 149, 187, 190, 201, 267, 389, 733, 989
BseYI CCCAGC 1 cut(s) 8
BsgI GTGCAG 2 cut(s) 1175, 1385
BshFI GGCC 6 cut(s) 56, 637, 1256, 1751, 1791, 1957
BshTI ACCGGT 1 cut(s) 959
BsiHKAI GWGCWC 1 cut(s) 2046
BsiHKCI CYCGRG 1 cut(s) 511
BsiSI CCGG 5 cut(s) 416, 512, 960, 1289, 1306
BslFI GGGAC 2 cut(s) 93, 1430
BslI CCNNNNNNNGG 7 cut(s) 116, 147, 257, 1048, 1263, 1305, 1719
BsmAI GTCTC 2 cut(s) 688, 1233
BsmFI GGGAC 2 cut(s) 93, 1430
BsmI GAATGC 2 cut(s) 1053, 1841
BsnI GGCC 6 cut(s) 56, 637, 1256, 1751, 1791, 1957
BsoBI CYCGRG 1 cut(s) 511
Bsp119I TTCGAA 1 cut(s) 696
Bsp1286I GDGCHC 4 cut(s) 264, 1373, 2046, 2084
Bsp1407I TGTACA 1 cut(s) 2022
Bsp143I GATC 6 cut(s) 179, 355, 407, 526, 751, 1432
Bsp19I CCATGG 2 cut(s) 549, 1713
BspACI CCGC 9 cut(s) 40, 57, 67, 96, 232, 278, 557, 1528, 1969
BspANI GGCC 6 cut(s) 56, 637, 1256, 1751, 1791, 1957
BspCNI CTCAG 2 cut(s) 1015, 1170
BspHI TCATGA 1 cut(s) 1773
BspLI GGNNCC 3 cut(s) 216, 624, 1958
BspMAI CTGCAG 3 cut(s) 74, 118, 979
BspPI GGATC 3 cut(s) 174, 350, 415
BspT104I TTCGAA 1 cut(s) 696
BsrDI GCAATG 3 cut(s) 238, 358, 1818
BsrFI RCCGGY 1 cut(s) 959
BsrGI TGTACA 1 cut(s) 2022
BsrI ACTGG 1 cut(s) 224
BssAI RCCGGY 1 cut(s) 959
BssECI CCNNGG 8 cut(s) 510, 511, 549, 920, 1058, 1713, 1830, 1952
BssMI GATC 6 cut(s) 179, 355, 407, 526, 751, 1432
BssNI GRCGYC 2 cut(s) 402, 1857
BssT1I CCWWGG 4 cut(s) 549, 1058, 1713, 1952
Bst2UI CCWGG 2 cut(s) 921, 1580
Bst4CI ACNGT 5 cut(s) 196, 257, 1153, 1342, 1672
Bst6I CTCTTC 3 cut(s) 602, 1617, 1920
BstACI GRCGYC 2 cut(s) 402, 1857
BstAUI TGTACA 1 cut(s) 2022
BstBAI YACGTR 1 cut(s) 1374
BstBI TTCGAA 1 cut(s) 696
BstDEI CTNAG 6 cut(s) 676, 770, 785, 1002, 1178, 1737
BstDSI CCRYGG 3 cut(s) 549, 1713, 1830
BstENI CCTNNNNNAGG 1 cut(s) 1046
BstF5I GGATG 4 cut(s) 618, 841, 1314, 1649
BstH2I RGCGCY 2 cut(s) 676, 1472
BstHHI GCGC 4 cut(s) 137, 675, 1108, 1471
BstKTI GATC 6 cut(s) 182, 358, 410, 529, 754, 1435
BstMAI GTCTC 2 cut(s) 688, 1233
BstMBI GATC 6 cut(s) 179, 355, 407, 526, 751, 1432
BstMWI GCNNNNNNNGC 2 cut(s) 240, 888
BstNI CCWGG 2 cut(s) 921, 1580
BstNSI RCATGY 2 cut(s) 164, 584
BstSCI CCNGG 5 cut(s) 510, 511, 919, 1304, 1578
BstSFI CTRYAG 4 cut(s) 70, 114, 975, 2055
BstSLI GKGCMC 3 cut(s) 264, 1373, 2084
BstV1I GCAGC 9 cut(s) 56, 149, 187, 190, 201, 267, 389, 733, 989
BstV2I GAAGAC 1 cut(s) 7
BstX2I RGATCY 1 cut(s) 179
BstYI RGATCY 1 cut(s) 179
BsuRI GGCC 6 cut(s) 56, 637, 1256, 1751, 1791, 1957
BtgI CCRYGG 3 cut(s) 549, 1713, 1830
BtsCI GGATG 4 cut(s) 618, 841, 1314, 1649
BtsI GCAGTG 2 cut(s) 111, 762
BtsIMutI CAGTG 5 cut(s) 111, 262, 762, 1677, 1735
CciI TCATGA 1 cut(s) 1773
CfoI GCGC 4 cut(s) 137, 675, 1108, 1471
Cfr10I RCCGGY 1 cut(s) 959
Cfr13I GGNCC 1 cut(s) 1956
Cfr9I CCCGGG 1 cut(s) 511
CseI GACGC 3 cut(s) 429, 1846, 1913
Csp6I GTAC 4 cut(s) 45, 227, 1606, 2023
CspAI ACCGGT 1 cut(s) 959
CviQI GTAC 4 cut(s) 45, 227, 1606, 2023
DdeI CTNAG 6 cut(s) 676, 770, 785, 1002, 1178, 1737
DpnI GATC 6 cut(s) 181, 357, 409, 528, 753, 1434
DpnII GATC 6 cut(s) 179, 355, 407, 526, 751, 1432
DraI TTTAAA 3 cut(s) 853, 1555, 1746
DraIII CACNNNGTG 1 cut(s) 257
Eam1104I CTCTTC 3 cut(s) 602, 1617, 1920
EarI CTCTTC 3 cut(s) 602, 1617, 1920
Eco130I CCWWGG 4 cut(s) 549, 1058, 1713, 1952
Eco147I AGGCCT 3 cut(s) 637, 1256, 1751
Eco47III AGCGCT 2 cut(s) 674, 1470
Eco57I CTGAAG 4 cut(s) 456, 626, 896, 1419
Eco88I CYCGRG 1 cut(s) 511
EcoNI CCTNNNNNAGG 1 cut(s) 1046
EcoO109I RGGNCCY 1 cut(s) 1956
EcoRII CCWGG 2 cut(s) 919, 1578
EcoT14I CCWWGG 4 cut(s) 549, 1058, 1713, 1952
ErhI CCWWGG 4 cut(s) 549, 1058, 1713, 1952
FalI AAGNNNNNCTT 8 cut(s) 638, 670, 846, 878, 1505, 1537, 2120, 2152
FaqI GGGAC 2 cut(s) 93, 1430
FauNDI CATATG 1 cut(s) 541
FbaI TGATCA 2 cut(s) 526, 1432
FblI GTMKAC 2 cut(s) 157, 1278
FokI GGATG 4 cut(s) 625, 848, 1321, 1636
FspAI RTGCGCAY 1 cut(s) 1107
FspBI CTAG 3 cut(s) 449, 1953, 1992
FspI TGCGCA 2 cut(s) 136, 1107
GlaI GCGC 4 cut(s) 136, 674, 1107, 1470
GsaI CCCAGC 1 cut(s) 12
HaeII RGCGCY 2 cut(s) 676, 1472
HaeIII GGCC 6 cut(s) 56, 637, 1256, 1751, 1791, 1957
HapII CCGG 5 cut(s) 416, 512, 960, 1289, 1306
HgaI GACGC 3 cut(s) 429, 1846, 1913
HhaI GCGC 4 cut(s) 137, 675, 1108, 1471
Hin1I GRCGYC 2 cut(s) 402, 1857
Hin6I GCGC 4 cut(s) 135, 673, 1106, 1469
HinP1I GCGC 4 cut(s) 135, 673, 1106, 1469
HindIII AAGCTT 2 cut(s) 772, 889
HinfI GANTC 4 cut(s) 857, 1518, 1709, 1770
HpaII CCGG 5 cut(s) 416, 512, 960, 1289, 1306
HphI GGTGA 8 cut(s) 402, 410, 536, 722, 851, 1477, 2024, 2055
Hpy166II GTNNAC 7 cut(s) 158, 229, 730, 1279, 1733, 2023, 2025
Hpy188I TCNGA 6 cut(s) 407, 445, 915, 1170, 1568, 2035
Hpy188III TCNNGA 3 cut(s) 479, 1123, 1774
Hpy8I GTNNAC 7 cut(s) 158, 229, 730, 1279, 1733, 2023, 2025
Hpy99I CGWCG 3 cut(s) 95, 393, 407
HpyCH4III ACNGT 5 cut(s) 196, 257, 1153, 1342, 1672
HpyCH4IV ACGT 4 cut(s) 90, 402, 1373, 1987
HpyF10VI GCNNNNNNNGC 2 cut(s) 240, 888
HpyF3I CTNAG 6 cut(s) 676, 770, 785, 1002, 1178, 1737
HpySE526I ACGT 4 cut(s) 90, 402, 1373, 1987
Hsp92I GRCGYC 2 cut(s) 402, 1857
HspAI GCGC 4 cut(s) 135, 673, 1106, 1469
Ksp22I TGATCA 2 cut(s) 526, 1432
Kzo9I GATC 6 cut(s) 179, 355, 407, 526, 751, 1432
LmnI GCTCC 1 cut(s) 628
Lsp1109I GCAGC 9 cut(s) 56, 149, 187, 190, 201, 267, 389, 733, 989
LweI GCATC 8 cut(s) 292, 389, 906, 916, 1084, 1093, 1832, 1927
MaeI CTAG 3 cut(s) 449, 1953, 1992
MaeII ACGT 4 cut(s) 90, 402, 1373, 1987
MaeIII GTNAC 5 cut(s) 398, 484, 1018, 1699, 1858
MalI GATC 6 cut(s) 181, 357, 409, 528, 753, 1434
MboI GATC 6 cut(s) 179, 355, 407, 526, 751, 1432
MfeI CAATTG 1 cut(s) 184
MflI RGATCY 1 cut(s) 179
MhlI GDGCHC 4 cut(s) 264, 1373, 2046, 2084
MlyI GAGTC 2 cut(s) 1703, 1764
MmeI TCCRAC 3 cut(s) 385, 650, 1663
MroXI GAANNNNTTC 2 cut(s) 1205, 1481
MseI TTAA 8 cut(s) 822, 852, 867, 887, 989, 1146, 1554, 1745
MspA1I CMGCKG 2 cut(s) 69, 280
MspI CCGG 5 cut(s) 416, 512, 960, 1289, 1306
MspR9I CCNGG 5 cut(s) 512, 513, 921, 1306, 1580
MunI CAATTG 1 cut(s) 184
Mva1269I GAATGC 2 cut(s) 1053, 1841
MvaI CCWGG 2 cut(s) 921, 1580
MwoI GCNNNNNNNGC 2 cut(s) 240, 888
NciI CCSGG 3 cut(s) 512, 513, 1306
NcoI CCATGG 2 cut(s) 549, 1713
NdeI CATATG 1 cut(s) 541
NdeII GATC 6 cut(s) 179, 355, 407, 526, 751, 1432
NlaIV GGNNCC 3 cut(s) 216, 624, 1958
NmuCI GTSAC 2 cut(s) 398, 1858
NsbI TGCGCA 2 cut(s) 136, 1107
NspI RCATGY 2 cut(s) 164, 584
NspV TTCGAA 1 cut(s) 696
PagI TCATGA 1 cut(s) 1773
PceI AGGCCT 3 cut(s) 637, 1256, 1751
PciI ACATGT 1 cut(s) 580
PcsI WCGNNNNNNNCGW 1 cut(s) 1356
PctI GAATGC 2 cut(s) 1053, 1841
PdmI GAANNNNTTC 2 cut(s) 1205, 1481
PfeI GAWTC 2 cut(s) 857, 1518
PflMI CCANNNNNTGG 2 cut(s) 257, 1719
PfoI TCCNGGA 1 cut(s) 1578
PinAI ACCGGT 1 cut(s) 959
PleI GAGTC 2 cut(s) 1703, 1764
PpsI GAGTC 2 cut(s) 1703, 1764
Ppu21I YACGTR 1 cut(s) 1374
PscI ACATGT 1 cut(s) 580
PsiI TTATAA 2 cut(s) 801, 1464
Psp6I CCWGG 2 cut(s) 919, 1578
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 2 cut(s) 919, 1578
PspN4I GGNNCC 3 cut(s) 216, 624, 1958
PspPI GGNCC 1 cut(s) 1956
PstI CTGCAG 3 cut(s) 74, 118, 979
PsuI RGATCY 1 cut(s) 179
RsaI GTAC 4 cut(s) 46, 228, 1607, 2024
RsaNI GTAC 4 cut(s) 45, 227, 1606, 2023
SaqAI TTAA 8 cut(s) 822, 852, 867, 887, 989, 1146, 1554, 1745
Sau3AI GATC 6 cut(s) 179, 355, 407, 526, 751, 1432
Sau96I GGNCC 1 cut(s) 1956
SchI GAGTC 2 cut(s) 1703, 1764
ScrFI CCNGG 5 cut(s) 512, 513, 921, 1306, 1580
SduI GDGCHC 4 cut(s) 264, 1373, 2046, 2084
SfaNI GCATC 8 cut(s) 292, 389, 906, 916, 1084, 1093, 1832, 1927
SfcI CTRYAG 4 cut(s) 70, 114, 975, 2055
SfuI TTCGAA 1 cut(s) 696
SmaI CCCGGG 1 cut(s) 513
SmlI CTYRAG 1 cut(s) 2045
SmoI CTYRAG 1 cut(s) 2045
SseBI AGGCCT 3 cut(s) 637, 1256, 1751
SsiI CCGC 9 cut(s) 40, 57, 67, 96, 232, 278, 557, 1528, 1969
SspI AATATT 2 cut(s) 466, 1295
SspMI CTAG 3 cut(s) 449, 1953, 1992
StuI AGGCCT 3 cut(s) 637, 1256, 1751
StyD4I CCNGG 5 cut(s) 510, 511, 919, 1304, 1578
StyI CCWWGG 4 cut(s) 549, 1058, 1713, 1952
TaaI ACNGT 5 cut(s) 196, 257, 1153, 1342, 1672
TaiI ACGT 4 cut(s) 93, 405, 1376, 1990
TaqI TCGA 9 cut(s) 286, 490, 696, 778, 1140, 1209, 1881, 1935, 2072
TatI WGTACW 3 cut(s) 226, 1605, 2022
TauI GCSGC 4 cut(s) 59, 98, 280, 560
TfiI GAWTC 2 cut(s) 857, 1518
Tru1I TTAA 8 cut(s) 822, 852, 867, 887, 989, 1146, 1554, 1745
Tru9I TTAA 8 cut(s) 822, 852, 867, 887, 989, 1146, 1554, 1745
TscAI CASTG 5 cut(s) 118, 262, 769, 1677, 1735
TseFI GTSAC 2 cut(s) 398, 1858
TseI GCWGC 9 cut(s) 69, 137, 189, 200, 203, 280, 377, 721, 977
Tsp45I GTSAC 2 cut(s) 398, 1858
TspGWI ACGGA 1 cut(s) 348
TspMI CCCGGG 1 cut(s) 511
TspRI CASTG 5 cut(s) 118, 262, 769, 1677, 1735
Van91I CCANNNNNTGG 2 cut(s) 257, 1719
XagI CCTNNNNNAGG 1 cut(s) 1046
XapI RAATTY 4 cut(s) 714, 848, 1126, 1477
XceI RCATGY 2 cut(s) 164, 584
XmaI CCCGGG 1 cut(s) 511
XmaJI CCTAGG 1 cut(s) 1952
XmiI GTMKAC 2 cut(s) 157, 1278
XmnI GAANNNNTTC 2 cut(s) 1205, 1481
XspI CTAG 3 cut(s) 449, 1953, 1992
ZraI GACGTC 1 cut(s) 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.