Rw0G002000

(-)-alpha-pinene synthase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00062
Physical Location & Seq
Reverse (-)
62988 .. 69615
6628 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G002000.1

Sequence Viewer

Length: 1779 bp
ATGTATACCTTTATATATACATCCATGCACAAGCAATATAGTACACCCAATACCAGCAAAAACTTGAAGATTAACTTACCGAACTATGCATATTCGTCTATAAATCCAATGTCAACCCAATCTGGTTCAGCTCCTCCATCACAAACCACCATGTCTGAAATTGCTGGTCTGACAGCAAACTTTCAACCGGCCGGCATTTGCGGAGATGGATTCATCAACTGTGATTTACTAGACAACATAACTCGTGCCCATATGCAACAGCAAATCGACCGACTGAAAGTATTAGTGAGGGAAGGTTTTACAGTTGCATCTGGTTTATCCCATAAACTGAAATTAATTGATGATATCCAGCGCCTAGGAGTGTCATCCCATTTTGAAACAGAAATAGAAGAAGCACTGGAACATATTCATGTTCAGTTGCATGATGTTGATCTGGACCTATACAAAGACTCTCTTCGTTTTCGTCTACTAAGACAAAATGGATATAATGTTTCACCTGATATATTCAACAAATTCAAAGATGCAAATGGTTACTTCAAGGAGAGCTTAATTGCCGATGTTCTGGGGATGCTAAGCTTGTATGAAGCAACGCATCTTAGGGTTCATGGAGAAGAAATACTAGAAGAGGCTCTGGTTTTCACCACCAATCACCTTAAGTTGGCGATAAGCCAGGTAAGCTATCCACTAACAGCACAGATATCTCAAGCCCTAGAAATACCTGTGCGGAGAGGTCTAGAGAGACTCTCTGCCAGGAATTACATGTCAATCTACCAAGCCACGACTTCACATAATGAAGCATTACTGAAACTTGCAAAGTTAGATTTCAATTTGGTTCAATCTTTACACAAAGAGGAGCTTAGTGAGGTTACCAGGTGGTGGAAAGAACTAGACTTTGAAAGGAACATCCCTTTTGTAAGGCATAGGATTGTGGAGTGTTTCTTTTGGATGGTGGGATTGTATTTTGAACCTCAATACTCGGTTGCGAGAAAGATTGCAACAAAACTGGGTGCTTTGGCTACAATTTTGGATGATATCTACGATTCATTTGCTACATTTGAAGAACTCAAGATATTTCGTGAAGCAATTGACAGGTGGGATGTCAACTATTGCATGAATGGCCTACCAAGATACATGAAAGTATATTATCATTCACTTTTGAATATTATGAATGAAATTGAGGAAGAGCTGGAAAATCAAGGAATGTCATACCGACTCCATTATGCAAAACAAGTTTTTAAGGATCAAGCCAGAGACTATCTCGTTGAGGCCGAATGGCTCCAAGAAGGATGTATCCCAAGCATGGAGGAGTACATGGCTGTTAGATTAAGGTCTGTTGCTGCTTGTTTGACTATAGTCATATCTTTACTTGGAATGGGCGATGCTGTTACCAAGGAAACATTTGAGTGGGTTTTGAAGTACCCTAAAATTGTCAAGGCTTCGAGCCTCATTTTTAGGCTCATGGATGACATTGGGGGTAGCAAGTTTCCGAAACAGAAAGGGGACGTTGCTTCTAGTATTGATTGCTACATGAAACAATATGGGGTCTCAGATGAAGAGACAATCGATGTGTTTAACAAACAAATTGTAGATTCATGGAAAGAAATAAATGAGGATTTTCTTCGACCAACTGCTGTGCCAATGTCTGTGCTCATGCGTGTTCTTAATTTCACAAGAGTTGTTGATCTGATTTACAAAGAAGAAGATGGCTTTACACATGTTGGGAAAGTAGTAAAACATGGTGTCGCTGCACTTTTTGTTGATCCATTGCCACTCGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

592

Amino Acids

68.0

Weight (kDa)

5.54

Isoelectric Point (pI)

48.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 80 - 237 6e-52 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 294 - 534 4.4e-92 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 334 - 534 2.1e-54 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 876
AccI GTMKAC 2 cut(s) 5, 466
AciI CCGC 2 cut(s) 201, 724
AclWI GGATC 2 cut(s) 1248, 1754
AcoI YGGCCR 1 cut(s) 189
AcsI RAATTY 1 cut(s) 512
AfaI GTAC 3 cut(s) 43, 1310, 1418
AfiI CCNNNNNNNGG 3 cut(s) 658, 876, 1300
AflII CTTAAG 1 cut(s) 653
AflIII ACRYGT 2 cut(s) 759, 1714
AjnI CCWGG 3 cut(s) 669, 749, 869
AluBI AGCT 6 cut(s) 131, 546, 576, 678, 856, 1186
AluI AGCT 6 cut(s) 131, 546, 576, 678, 856, 1186
Alw21I GWGCWC 1 cut(s) 1650
Alw26I GTCTC 4 cut(s) 733, 1245, 1549, 1550
AlwI GGATC 2 cut(s) 1248, 1754
AoxI GGCC 3 cut(s) 189, 1117, 1266
ApeKI GCWGC 2 cut(s) 1337, 1745
ApoI RAATTY 1 cut(s) 512
AseI ATTAAT 1 cut(s) 335
Asp700I GAANNNNTTC 1 cut(s) 405
AspA2I CCTAGG 1 cut(s) 355
AspLEI GCGC 1 cut(s) 354
AspS9I GGNCC 1 cut(s) 436
AsuHPI GGTGA 3 cut(s) 486, 631, 641
AvaII GGWCC 1 cut(s) 436
AvrII CCTAGG 1 cut(s) 355
BaeGI GKGCMC 1 cut(s) 250
BauI CACGAG 1 cut(s) 243
Bbv12I GWGCWC 1 cut(s) 1650
BbvI GCAGC 2 cut(s) 1324, 1732
BccI CCATC 4 cut(s) 145, 200, 940, 1697
BcgI CGANNNNNNTGC 2 cut(s) 1028, 1062
BciT130I CCWGG 3 cut(s) 671, 751, 871
BciVI GTATCC 1 cut(s) 1301
BcoDI GTCTC 4 cut(s) 733, 1245, 1549, 1550
BfaI CTAG 7 cut(s) 230, 356, 620, 710, 734, 887, 1512
BfmI CTRYAG 1 cut(s) 1350
BfoI RGCGCY 1 cut(s) 355
BfrI CTTAAG 1 cut(s) 653
BfuI GTATCC 1 cut(s) 1301
BisI GCNGC 2 cut(s) 1338, 1746
BlnI CCTAGG 1 cut(s) 355
BlpI GCTNAGC 1 cut(s) 572
BlsI GCNGC 2 cut(s) 1339, 1747
Bme1390I CCNGG 3 cut(s) 671, 751, 871
Bme18I GGWCC 1 cut(s) 436
BmgT120I GGNCC 1 cut(s) 436
BmiI GGNNCC 1 cut(s) 1277
BmrFI CCNGG 3 cut(s) 671, 751, 871
BmrI ACTGGG 1 cut(s) 1013
BmsI GCATC 5 cut(s) 317, 511, 558, 601, 1369
BmuI ACTGGG 1 cut(s) 1013
BoxI GACNNNNGTC 1 cut(s) 1352
BplI GAGNNNNNCTC 4 cut(s) 728, 760, 1242, 1274
Bpu1102I GCTNAGC 1 cut(s) 572
BpuEI CTTGAG 2 cut(s) 687, 1049
Bsa29I ATCGAT 1 cut(s) 1563
BsaBI GATNNNNATC 1 cut(s) 429
BsaI GGTCTC 1 cut(s) 1549
BsaJI CCNNGG 2 cut(s) 355, 1389
Bsc4I CCNNNNNNNGG 3 cut(s) 658, 876, 1300
Bse118I RCCGGY 2 cut(s) 187, 191
Bse1I ACTGG 2 cut(s) 402, 1008
Bse3DI GCAATG 1 cut(s) 1763
Bse8I GATNNNNATC 1 cut(s) 429
BseBI CCWGG 3 cut(s) 671, 751, 871
BseCI ATCGAT 1 cut(s) 1563
BseDI CCNNGG 2 cut(s) 355, 1389
BseGI GGATG 9 cut(s) 20, 365, 573, 903, 951, 1033, 1102, 1292, 1468
BseJI GATNNNNATC 1 cut(s) 429
BseLI CCNNNNNNNGG 3 cut(s) 658, 876, 1300
BseMI GCAATG 1 cut(s) 1763
BseMII CTCAG 1 cut(s) 1560
BseNI ACTGG 2 cut(s) 402, 1008
BseRI GAGGAG 3 cut(s) 123, 866, 1319
BseSI GKGCMC 1 cut(s) 250
BseX3I CGGCCG 1 cut(s) 189
BseXI GCAGC 2 cut(s) 1324, 1732
BsgI GTGCAG 1 cut(s) 1731
Bsh1285I CGRYCG 2 cut(s) 192, 271
BshFI GGCC 3 cut(s) 191, 1119, 1268
BshVI ATCGAT 1 cut(s) 1563
BsiEI CGRYCG 2 cut(s) 192, 271
BsiHKAI GWGCWC 1 cut(s) 1650
BsiSI CCGG 2 cut(s) 188, 192
BslFI GGGAC 1 cut(s) 1514
BslI CCNNNNNNNGG 3 cut(s) 658, 876, 1300
BsmAI GTCTC 4 cut(s) 733, 1245, 1549, 1550
BsmFI GGGAC 1 cut(s) 1514
BsnI GGCC 3 cut(s) 191, 1119, 1268
Bso31I GGTCTC 1 cut(s) 1549
Bsp1286I GDGCHC 2 cut(s) 250, 1650
Bsp143I GATC 4 cut(s) 430, 1240, 1681, 1759
Bsp1720I GCTNAGC 1 cut(s) 572
BspACI CCGC 2 cut(s) 201, 724
BspANI GGCC 3 cut(s) 191, 1119, 1268
BspCNI CTCAG 1 cut(s) 1559
BspDI ATCGAT 1 cut(s) 1563
BspLI GGNNCC 1 cut(s) 1277
BspPI GGATC 2 cut(s) 1248, 1754
BspQI GCTCTTC 1 cut(s) 1176
BspTI CTTAAG 1 cut(s) 653
BspTNI GGTCTC 1 cut(s) 1549
BsrDI GCAATG 1 cut(s) 1763
BsrFI RCCGGY 2 cut(s) 187, 191
BsrI ACTGG 2 cut(s) 402, 1008
BssAI RCCGGY 2 cut(s) 187, 191
BssECI CCNNGG 2 cut(s) 355, 1389
BssMI GATC 4 cut(s) 430, 1240, 1681, 1759
BssNAI GTATAC 1 cut(s) 6
BssSI CACGAG 1 cut(s) 243
BssT1I CCWWGG 2 cut(s) 355, 1389
Bst1107I GTATAC 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 243
Bst2UI CCWGG 3 cut(s) 671, 751, 871
Bst4CI ACNGT 2 cut(s) 221, 304
Bst6I CTCTTC 4 cut(s) 459, 618, 1176, 1548
BstAFI CTTAAG 1 cut(s) 653
BstC8I GCNNGC 1 cut(s) 193
BstDEI CTNAG 5 cut(s) 470, 572, 596, 857, 1546
BstEII GGTNACC 1 cut(s) 865
BstF5I GGATG 9 cut(s) 20, 365, 573, 903, 951, 1033, 1102, 1292, 1468
BstH2I RGCGCY 1 cut(s) 355
BstHHI GCGC 1 cut(s) 354
BstKTI GATC 4 cut(s) 433, 1243, 1684, 1762
BstMAI GTCTC 4 cut(s) 733, 1245, 1549, 1550
BstMBI GATC 4 cut(s) 430, 1240, 1681, 1759
BstMCI CGRYCG 2 cut(s) 192, 271
BstMWI GCNNNNNNNGC 2 cut(s) 675, 1116
BstNI CCWGG 3 cut(s) 671, 751, 871
BstNSI RCATGY 2 cut(s) 763, 1718
BstPAI GACNNNNGTC 1 cut(s) 1352
BstPI GGTNACC 1 cut(s) 865
BstSCI CCNGG 3 cut(s) 669, 749, 869
BstSFI CTRYAG 1 cut(s) 1350
BstSLI GKGCMC 1 cut(s) 250
BstV1I GCAGC 2 cut(s) 1324, 1732
BstZ17I GTATAC 1 cut(s) 6
BstZI CGGCCG 1 cut(s) 189
Bsu15I ATCGAT 1 cut(s) 1563
BsuI GTATCC 1 cut(s) 1301
BsuRI GGCC 3 cut(s) 191, 1119, 1268
BsuTUI ATCGAT 1 cut(s) 1563
BtgZI GCGATG 1 cut(s) 1392
BtsCI GGATG 9 cut(s) 20, 365, 573, 903, 951, 1033, 1102, 1292, 1468
BtsIMutI CAGTG 1 cut(s) 395
Cac8I GCNNGC 1 cut(s) 193
CfoI GCGC 1 cut(s) 354
Cfr10I RCCGGY 2 cut(s) 187, 191
Cfr13I GGNCC 1 cut(s) 436
ClaI ATCGAT 1 cut(s) 1563
CsiI ACCWGGT 1 cut(s) 869
Csp6I GTAC 3 cut(s) 42, 1309, 1417
CviQI GTAC 3 cut(s) 42, 1309, 1417
DdeI CTNAG 5 cut(s) 470, 572, 596, 857, 1546
DpnI GATC 4 cut(s) 432, 1242, 1683, 1761
DpnII GATC 4 cut(s) 430, 1240, 1681, 1759
EaeI YGGCCR 1 cut(s) 189
EagI CGGCCG 1 cut(s) 189
Eam1104I CTCTTC 4 cut(s) 459, 618, 1176, 1548
EarI CTCTTC 4 cut(s) 459, 618, 1176, 1548
EclXI CGGCCG 1 cut(s) 189
Eco130I CCWWGG 2 cut(s) 355, 1389
Eco31I GGTCTC 1 cut(s) 1549
Eco32I GATATC 3 cut(s) 346, 699, 1033
Eco47I GGWCC 1 cut(s) 436
Eco52I CGGCCG 1 cut(s) 189
Eco91I GGTNACC 1 cut(s) 865
EcoO65I GGTNACC 1 cut(s) 865
EcoRII CCWGG 3 cut(s) 669, 749, 869
EcoRV GATATC 3 cut(s) 346, 699, 1033
EcoT14I CCWWGG 2 cut(s) 355, 1389
EcoT22I ATGCAT 1 cut(s) 91
ErhI CCWWGG 2 cut(s) 355, 1389
FalI AAGNNNNNCTT 8 cut(s) 59, 91, 438, 470, 530, 562, 840, 872
FaqI GGGAC 1 cut(s) 1514
FauNDI CATATG 1 cut(s) 252
FblI GTMKAC 2 cut(s) 5, 466
Fnu4HI GCNGC 2 cut(s) 1338, 1746
FokI GGATG 9 cut(s) 7, 352, 580, 890, 958, 1040, 1109, 1299, 1475
Fsp4HI GCNGC 2 cut(s) 1338, 1746
FspBI CTAG 7 cut(s) 230, 356, 620, 710, 734, 887, 1512
GlaI GCGC 1 cut(s) 353
GluI GCNGC 2 cut(s) 1338, 1746
HaeII RGCGCY 1 cut(s) 355
HaeIII GGCC 3 cut(s) 191, 1119, 1268
HapII CCGG 2 cut(s) 188, 192
HhaI GCGC 1 cut(s) 354
Hin6I GCGC 1 cut(s) 352
HinP1I GCGC 1 cut(s) 352
HincII GTYRAC 2 cut(s) 114, 1102
HindII GTYRAC 2 cut(s) 114, 1102
HindIII AAGCTT 1 cut(s) 574
HinfI GANTC 6 cut(s) 210, 449, 741, 1040, 1212, 1589
HpaII CCGG 2 cut(s) 188, 192
HphI GGTGA 3 cut(s) 486, 631, 641
Hpy166II GTNNAC 5 cut(s) 6, 44, 114, 467, 1102
Hpy188I TCNGA 5 cut(s) 157, 171, 1488, 1549, 1686
Hpy188III TCNNGA 4 cut(s) 434, 734, 1066, 1076
Hpy8I GTNNAC 5 cut(s) 6, 44, 114, 467, 1102
HpyAV CCTTC 2 cut(s) 287, 1277
HpyCH4III ACNGT 2 cut(s) 221, 304
HpyCH4IV ACGT 1 cut(s) 1503
HpyF10VI GCNNNNNNNGC 2 cut(s) 675, 1116
HpyF3I CTNAG 5 cut(s) 470, 572, 596, 857, 1546
HpySE526I ACGT 1 cut(s) 1503
HspAI GCGC 1 cut(s) 352
KroI GCCGGC 1 cut(s) 191
KroNI GCCGGC 1 cut(s) 193
Kzo9I GATC 4 cut(s) 430, 1240, 1681, 1759
LguI GCTCTTC 1 cut(s) 1176
LmnI GCTCC 3 cut(s) 136, 853, 1281
Lsp1109I GCAGC 2 cut(s) 1324, 1732
LweI GCATC 5 cut(s) 317, 511, 558, 601, 1369
MabI ACCWGGT 1 cut(s) 869
MaeI CTAG 7 cut(s) 230, 356, 620, 710, 734, 887, 1512
MaeII ACGT 1 cut(s) 1503
MaeIII GTNAC 3 cut(s) 530, 865, 1384
MalI GATC 4 cut(s) 432, 1242, 1683, 1761
MboI GATC 4 cut(s) 430, 1240, 1681, 1759
MfeI CAATTG 1 cut(s) 1083
MhlI GDGCHC 2 cut(s) 250, 1650
MlyI GAGTC 3 cut(s) 443, 735, 1206
Mph1103I ATGCAT 1 cut(s) 91
MroNI GCCGGC 1 cut(s) 191
MroXI GAANNNNTTC 1 cut(s) 405
MseI TTAA 8 cut(s) 72, 335, 548, 654, 1236, 1325, 1572, 1662
MslI CAYNNNNRTG 3 cut(s) 408, 1402, 1774
MspCI CTTAAG 1 cut(s) 653
MspI CCGG 2 cut(s) 188, 192
MspR9I CCNGG 3 cut(s) 671, 751, 871
MunI CAATTG 1 cut(s) 1083
MvaI CCWGG 3 cut(s) 671, 751, 871
MwoI GCNNNNNNNGC 2 cut(s) 675, 1116
NaeI GCCGGC 1 cut(s) 193
NdeI CATATG 1 cut(s) 252
NdeII GATC 4 cut(s) 430, 1240, 1681, 1759
NgoMIV GCCGGC 1 cut(s) 191
NlaIV GGNNCC 1 cut(s) 1277
NsiI ATGCAT 1 cut(s) 91
NspI RCATGY 2 cut(s) 763, 1718
PciI ACATGT 2 cut(s) 759, 1714
PciSI GCTCTTC 1 cut(s) 1176
PcsI WCGNNNNNNNCGW 1 cut(s) 1266
PdiI GCCGGC 1 cut(s) 193
PdmI GAANNNNTTC 1 cut(s) 405
PfeI GAWTC 3 cut(s) 210, 1040, 1589
PflMI CCANNNNNTGG 1 cut(s) 876
PkrI GCNGC 2 cut(s) 1339, 1747
PleI GAGTC 3 cut(s) 443, 735, 1206
PpsI GAGTC 3 cut(s) 443, 735, 1206
PscI ACATGT 2 cut(s) 759, 1714
PshAI GACNNNNGTC 1 cut(s) 1352
PshBI ATTAAT 1 cut(s) 335
Psp6I CCWGG 3 cut(s) 669, 749, 869
PspEI GGTNACC 1 cut(s) 865
PspGI CCWGG 3 cut(s) 669, 749, 869
PspN4I GGNNCC 1 cut(s) 1277
PspPI GGNCC 1 cut(s) 436
RsaI GTAC 3 cut(s) 43, 1310, 1418
RsaNI GTAC 3 cut(s) 42, 1309, 1417
RseI CAYNNNNRTG 3 cut(s) 408, 1402, 1774
SapI GCTCTTC 1 cut(s) 1176
SaqAI TTAA 8 cut(s) 72, 335, 548, 654, 1236, 1325, 1572, 1662
SatI GCNGC 2 cut(s) 1338, 1746
Sau3AI GATC 4 cut(s) 430, 1240, 1681, 1759
Sau96I GGNCC 1 cut(s) 436
SchI GAGTC 3 cut(s) 443, 735, 1206
ScrFI CCNGG 3 cut(s) 671, 751, 871
SduI GDGCHC 2 cut(s) 250, 1650
SexAI ACCWGGT 1 cut(s) 869
SfaNI GCATC 5 cut(s) 317, 511, 558, 601, 1369
SfcI CTRYAG 1 cut(s) 1350
SinI GGWCC 1 cut(s) 436
SmiMI CAYNNNNRTG 3 cut(s) 408, 1402, 1774
SmlI CTYRAG 3 cut(s) 653, 702, 1064
SmoI CTYRAG 3 cut(s) 653, 702, 1064
SsiI CCGC 2 cut(s) 201, 724
SspI AATATT 1 cut(s) 1162
SspMI CTAG 7 cut(s) 230, 356, 620, 710, 734, 887, 1512
StyD4I CCNGG 3 cut(s) 669, 749, 869
StyI CCWWGG 2 cut(s) 355, 1389
TaaI ACNGT 2 cut(s) 221, 304
TaiI ACGT 1 cut(s) 1506
TaqI TCGA 5 cut(s) 267, 1439, 1563, 1621, 1773
TaqII GACCGA 1 cut(s) 285
TatI WGTACW 2 cut(s) 41, 1308
TfiI GAWTC 3 cut(s) 210, 1040, 1589
Tru1I TTAA 8 cut(s) 72, 335, 548, 654, 1236, 1325, 1572, 1662
Tru9I TTAA 8 cut(s) 72, 335, 548, 654, 1236, 1325, 1572, 1662
TscAI CASTG 1 cut(s) 402
TseI GCWGC 2 cut(s) 1337, 1745
TspRI CASTG 1 cut(s) 402
Van91I CCANNNNNTGG 1 cut(s) 876
Vha464I CTTAAG 1 cut(s) 653
VpaK11BI GGWCC 1 cut(s) 436
VspI ATTAAT 1 cut(s) 335
XapI RAATTY 1 cut(s) 512
XbaI TCTAGA 1 cut(s) 733
XceI RCATGY 2 cut(s) 763, 1718
XmaJI CCTAGG 1 cut(s) 355
XmiI GTMKAC 2 cut(s) 5, 466
XmnI GAANNNNTTC 1 cut(s) 405
XspI CTAG 7 cut(s) 230, 356, 620, 710, 734, 887, 1512
Zsp2I ATGCAT 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.