(-)-germacrene D synthase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Terpene_synth | PF01397 | 2 - 90 | 1.1e-26 | Terpene synthase, N-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 78 |
| AcsI | RAATTY | 2 cut(s) | 92, 415 |
| AfaI | GTAC | 2 cut(s) | 140, 162 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 156, 157 |
| AgsI | TTSAA | 3 cut(s) | 249, 271, 382 |
| AjnI | CCWGG | 1 cut(s) | 299 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 362, 394 |
| AleI | CACNNNNGTG | 1 cut(s) | 302 |
| AluBI | AGCT | 1 cut(s) | 135 |
| AluI | AGCT | 1 cut(s) | 135 |
| ApeKI | GCWGC | 2 cut(s) | 116, 391 |
| ApoI | RAATTY | 2 cut(s) | 92, 415 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 105 |
| AsuHPI | GGTGA | 2 cut(s) | 190, 289 |
| BbsI | GAAGAC | 1 cut(s) | 177 |
| BbvI | GCAGC | 2 cut(s) | 103, 403 |
| BccI | CCATC | 1 cut(s) | 159 |
| BciT130I | CCWGG | 1 cut(s) | 301 |
| BclI | TGATCA | 1 cut(s) | 85 |
| BfaI | CTAG | 1 cut(s) | 191 |
| BisI | GCNGC | 2 cut(s) | 117, 392 |
| BlsI | GCNGC | 2 cut(s) | 118, 393 |
| Bme1390I | CCNGG | 1 cut(s) | 301 |
| BmrFI | CCNGG | 1 cut(s) | 301 |
| BmsI | GCATC | 2 cut(s) | 128, 303 |
| BpiI | GAAGAC | 1 cut(s) | 177 |
| BpuEI | CTTGAG | 1 cut(s) | 233 |
| BsaBI | GATNNNNATC | 1 cut(s) | 15 |
| BsaJI | CCNNGG | 1 cut(s) | 300 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 156, 157 |
| Bse8I | GATNNNNATC | 1 cut(s) | 15 |
| BseBI | CCWGG | 1 cut(s) | 301 |
| BseDI | CCNNGG | 1 cut(s) | 300 |
| BseJI | GATNNNNATC | 1 cut(s) | 15 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 156, 157 |
| BseXI | GCAGC | 2 cut(s) | 103, 403 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 156, 157 |
| BsmI | GAATGC | 1 cut(s) | 338 |
| Bsp143I | GATC | 4 cut(s) | 16, 85, 219, 325 |
| BspACI | CCGC | 1 cut(s) | 78 |
| BssECI | CCNNGG | 1 cut(s) | 300 |
| BssMI | GATC | 4 cut(s) | 16, 85, 219, 325 |
| Bst2UI | CCWGG | 1 cut(s) | 301 |
| Bst4CI | ACNGT | 1 cut(s) | 230 |
| Bst6I | CTCTTC | 1 cut(s) | 177 |
| BstDEI | CTNAG | 3 cut(s) | 50, 155, 322 |
| BstKTI | GATC | 4 cut(s) | 19, 88, 222, 328 |
| BstMBI | GATC | 4 cut(s) | 16, 85, 219, 325 |
| BstNI | CCWGG | 1 cut(s) | 301 |
| BstSCI | CCNGG | 1 cut(s) | 299 |
| BstV1I | GCAGC | 2 cut(s) | 103, 403 |
| BstV2I | GAAGAC | 1 cut(s) | 177 |
| Csp6I | GTAC | 2 cut(s) | 139, 161 |
| CviAII | CATG | 1 cut(s) | 164 |
| CviJI | RGCY | 4 cut(s) | 135, 146, 194, 280 |
| CviKI_1 | RGCY | 4 cut(s) | 135, 146, 194, 280 |
| CviQI | GTAC | 2 cut(s) | 139, 161 |
| DdeI | CTNAG | 3 cut(s) | 50, 155, 322 |
| DpnI | GATC | 4 cut(s) | 18, 87, 221, 327 |
| DpnII | GATC | 4 cut(s) | 16, 85, 219, 325 |
| Eam1104I | CTCTTC | 1 cut(s) | 177 |
| EarI | CTCTTC | 1 cut(s) | 177 |
| EcoRII | CCWGG | 1 cut(s) | 299 |
| FaeI | CATG | 1 cut(s) | 167 |
| FaiI | YATR | 9 cut(s) | 24, 165, 176, 203, 345, 402, 422, 426, 428 |
| FatI | CATG | 1 cut(s) | 163 |
| FbaI | TGATCA | 1 cut(s) | 85 |
| Fnu4HI | GCNGC | 2 cut(s) | 117, 392 |
| Fsp4HI | GCNGC | 2 cut(s) | 117, 392 |
| FspBI | CTAG | 1 cut(s) | 191 |
| GluI | GCNGC | 2 cut(s) | 117, 392 |
| Hin1II | CATG | 1 cut(s) | 167 |
| HindIII | AAGCTT | 1 cut(s) | 133 |
| HinfI | GANTC | 3 cut(s) | 215, 271, 338 |
| HphI | GGTGA | 2 cut(s) | 190, 289 |
| Hpy188I | TCNGA | 3 cut(s) | 90, 111, 287 |
| Hpy188III | TCNNGA | 4 cut(s) | 123, 212, 329, 358 |
| HpyAV | CCTTC | 2 cut(s) | 205, 292 |
| HpyCH4III | ACNGT | 1 cut(s) | 230 |
| HpyCH4IV | ACGT | 1 cut(s) | 37 |
| HpyCH4V | TGCA | 2 cut(s) | 119, 391 |
| HpyF3I | CTNAG | 3 cut(s) | 50, 155, 322 |
| HpySE526I | ACGT | 1 cut(s) | 37 |
| Hsp92II | CATG | 1 cut(s) | 167 |
| Ksp22I | TGATCA | 1 cut(s) | 85 |
| Kzo9I | GATC | 4 cut(s) | 16, 85, 219, 325 |
| LpnPI | CCDG | 4 cut(s) | 108, 286, 313, 398 |
| Lsp1109I | GCAGC | 2 cut(s) | 103, 403 |
| LweI | GCATC | 2 cut(s) | 128, 303 |
| MaeI | CTAG | 1 cut(s) | 191 |
| MaeII | ACGT | 1 cut(s) | 37 |
| MaeIII | GTNAC | 1 cut(s) | 256 |
| MalI | GATC | 4 cut(s) | 18, 87, 221, 327 |
| MboI | GATC | 4 cut(s) | 16, 85, 219, 325 |
| MboII | GAAGA | 2 cut(s) | 182, 194 |
| MluCI | AATT | 3 cut(s) | 92, 395, 415 |
| MlyI | GAGTC | 1 cut(s) | 224 |
| MmeI | TCCRAC | 1 cut(s) | 354 |
| MnlI | CCTC | 2 cut(s) | 178, 250 |
| MroXI | GAANNNNTTC | 1 cut(s) | 105 |
| MseI | TTAA | 3 cut(s) | 96, 131, 233 |
| MslI | CAYNNNNRTG | 1 cut(s) | 302 |
| MspR9I | CCNGG | 1 cut(s) | 301 |
| Mva1269I | GAATGC | 1 cut(s) | 338 |
| MvaI | CCWGG | 1 cut(s) | 301 |
| NdeII | GATC | 4 cut(s) | 16, 85, 219, 325 |
| NlaIII | CATG | 1 cut(s) | 167 |
| OliI | CACNNNNGTG | 1 cut(s) | 302 |
| PctI | GAATGC | 1 cut(s) | 338 |
| PdmI | GAANNNNTTC | 1 cut(s) | 105 |
| PfeI | GAWTC | 2 cut(s) | 271, 338 |
| PkrI | GCNGC | 2 cut(s) | 118, 393 |
| PleI | GAGTC | 1 cut(s) | 223 |
| PpsI | GAGTC | 1 cut(s) | 223 |
| Psp6I | CCWGG | 1 cut(s) | 299 |
| PspGI | CCWGG | 1 cut(s) | 299 |
| RsaI | GTAC | 2 cut(s) | 140, 162 |
| RsaNI | GTAC | 2 cut(s) | 139, 161 |
| RseI | CAYNNNNRTG | 1 cut(s) | 302 |
| SaqAI | TTAA | 3 cut(s) | 96, 131, 233 |
| SatI | GCNGC | 2 cut(s) | 117, 392 |
| Sau3AI | GATC | 4 cut(s) | 16, 85, 219, 325 |
| SchI | GAGTC | 1 cut(s) | 224 |
| ScrFI | CCNGG | 1 cut(s) | 301 |
| SetI | ASST | 4 cut(s) | 40, 64, 137, 387 |
| SfaNI | GCATC | 2 cut(s) | 128, 303 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 302 |
| SmlI | CTYRAG | 1 cut(s) | 212 |
| SmoI | CTYRAG | 1 cut(s) | 212 |
| Sse9I | AATT | 3 cut(s) | 92, 395, 415 |
| SsiI | CCGC | 1 cut(s) | 78 |
| SspMI | CTAG | 1 cut(s) | 191 |
| StyD4I | CCNGG | 1 cut(s) | 299 |
| TaaI | ACNGT | 1 cut(s) | 230 |
| TaiI | ACGT | 1 cut(s) | 40 |
| TaqI | TCGA | 2 cut(s) | 180, 218 |
| TasI | AATT | 3 cut(s) | 92, 395, 415 |
| TfiI | GAWTC | 2 cut(s) | 271, 338 |
| Tru1I | TTAA | 3 cut(s) | 96, 131, 233 |
| Tru9I | TTAA | 3 cut(s) | 96, 131, 233 |
| TseI | GCWGC | 2 cut(s) | 116, 391 |
| TspDTI | ATGAA | 2 cut(s) | 363, 389 |
| XapI | RAATTY | 2 cut(s) | 92, 415 |
| XmnI | GAANNNNTTC | 1 cut(s) | 105 |
| XspI | CTAG | 1 cut(s) | 191 |